Ll_transcript_178906

• Id Trinity: FTRINITY_DN58681_c4_g1_i18
• Name Transcript: Ll_transcript_178906
• Sequence: AGAGCACGGCACAAAACGGTCAAACATATGACTAAAACGACAAAGGATTTTTGTTTGTGGAAGAGTGAAGAAAAAGTACGATGCTGTTAGGGTTCATAAA TACCTTAACCCATTCACACTCCTCTCTCCAATTCATTCCACTCTCTCATTCTCACTCGCTACCATTCCCTGACAGTTTTGCTGAAGGTTGCATCTAGGAG ATTTGCTTTAACAGCAACTAAGACACAATTCATATCAACCATGTCAGTTGGTGAAGATAACGTGAGCAGCGTGAAAAGACAGTTGACACAGTTGTTTGAG ATATCTCTTAGGGAAACTGTACCTGGTGAGTCAGATGTAGTGCCATTAGTTGATTCGTGCAGTGAGAAATCTGGTGTGAAACATGGTGATTATCAATGTA ATAATGCGATGGTTCTATGGGCTAAGATAAAAGGGAAGCAGACAGGATTCAGGGGTCCCCCAGCTGTTGGACAGGCCATCATGAAAAATCTCCCTCCATC TGAAATAATAGAATCATGTTCTGTAGCTGGTCCTGGATTTGTGAATGTTGTTTTATCAAAGAATTGGATAGCACAGAGCTTACATAGGATGCTAATTGAT GGTATTGATACATGGGCACCGCGACTTCCCCTCAAAAGGGCTGTGGTTGATTTTTCCTCACCTAATATAGCAAAGGAAATGCATGTTGGTCACCTGAGAT CTACCATTATAGGGGACACATTAGCTCGTATGCTTGAATTTTCACATGTGGAAGTTCTCCGCCGAAATCATGTTGGTGACTGGGGAACTCAGTTTGGGAT GTTGATTGAATTTCTCTTTGAAAAATTTCCAAACCCAGAAGAAGTTAATGAATCAGCCATCGGGGATCTTCAGGCATTCTATAAGGCCTCAAAAGTGAGA TTCGATAGTGATTCTGAATTTAAGCAGAGGGCACAACAAGCTGTGGTCCGGCTACAGGGTGGAGAAATCAGGTATCGCAAGGCATGGAAACAAATTTGTG AAATTAGCAGGACCGAATTCCACAGGGTCTATGAACGCCTTGGAGTTCAATTGGAGGAAAAGGGAGAGAGCTTCTATAATCCATTTATCCCCAGCGTTTT AGAAGAACTAGGTAATAAAGGACTGATTGAAGAAAGTGAGGGTGCTCGTGTGATATTTGTTGATGGTGTAAAGATACCACTCATTGTTGTGAAGAGCGAT GGTGGTTACAACTATGCTTCAACTGATCTAACAGCACTCTGGTATCGGCTAAATGAAGAAAAAGCTGAATGGATTATATATGTTACAGATGTTGGGCAGC AACAACACTTTGATATGGTTTTTAAGGCCGCTAAGCGTGCAGGTTGGCTGCTAGCTGATGATAGTTTATATCCAAAAGCTACTCATGTAGGTTTTGGTCT TGTTCTCGGGGAAGATGGAAAACGATTTCGGACTCGCAACACTGAGGTTGTTCGATTGGTTGATTTGCTAGACGAAGCCAAGACTCGCAGTAAAACTGCT GTTCTTGAACGTGATGCTGCTAAAGATTGGCCTGAGGAGGAGGTTGATAAAACATCAGAGGCAGTTGGTTATGGTGCTGTTAAGTATGCCGACTTGAAGA ACAACAGATTATCGAATTACACATTCAATTTTGATCAGATGCTGAATGATAAGGGCAATACTGCTGTTTATTTGCTGTATGCACATGCTAGGATCTGTTC CATTATCAGGAAATCTGGTAAAGACATAGAACAAGTAAAGAAAACTGGGAAAATAGTGTTGGATCATGACGGTGAGCGTGCATTGGGGCTTCATTTGGTC CAATTTTCCGAGGTTGTGGAGCAGGCTTGCACTAATTTACTGCCCAGTACATTATGTGAATACCTCTATGATTTGTCAGATATCTTCACCAAAAAGTTTT ATTCAAATTGTCAGGTTATTGGGTCGCCTGAGGAAACTAGTAGGCTGTTGTTGTGTGAAGCAACTGCAATTGTGATGAGAAAGTGCTTTTATCTCCTTGG AATTGAACCTGTTTACAAGATATAAAGGGTTCACATACATTTTTAACTTGTAACAAGAAAATTCATGTTATGGATTCTACTCGAAACAAAAAAAACTGCA ACTATACAGTGTCATTTTGCAATCTCAATCTTCAAAATAGTCTACAAATATGTTTGTTAGATGGCAGTTTTTAAGATACAACTACCAAGAAAGAACAGAA AATTGTGCTCATGTAGCATTTGCAATAACAAGCCATTTAGAAATCAGAGTTTAGATATTGCCATTTTCTAGTTTTTTATATTTACTTTTCTCCATTTTTC TTTCTACCAAACTCTATCAAAATTGTGATTATGCTTAGACAAGTATTGAGATGATATGATAATAAGTGAAATATATATATATATATGTGTATG
• Tissue: flowers
• Gene name: LI_gene_79156;
• Additional information: details;

Expression of Ll_transcript_178906

FPKM

• FPAB: 9.3
• FPNAB: 17.3
• LF1: 12.3
• LF2: 9.3
• LF3: 10.7
• LF4: 10.1
• UF1: 11.6
• UF2: 10
• UF3: 10
• UF4: 9.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_178906

• Blastp: Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 76.09% of identity
• Blastx: Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 73.59% of identity
• Eggnog: arginyL-tRNA synthetase(COG0018)
• Kegg: Link to kegg annotations (AT4G26300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458196.1)
• Pfam: Arginyl tRNA synthetase N terminal domain (PF03485.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;