Ll_transcript_178917

• Id Trinity: FTRINITY_DN58681_c4_g1_i27
• Name Transcript: Ll_transcript_178917
• Sequence: AGAGCACGGCACAAAACGGTCAAACATATGACTAAAACGACAAAGGATTTTTGTTTGTGGAAGAGTGAAGAAAAAGTACGATGCTGTTAGGGTTCATAAA TACCTTAACCCATTCACACTCCTCTCTCCAATTCATTCCACTCTCTCATTCTCACTCGCTACCATTCCCTGACAGTTTTGCTGAAGGTTGCATCTAGGAG ATTTGCTTTAACAGCAACTAAGACACAATTCATATCAACCATGTCAGTTGGTGAAGATAACGTGAGCAGCGTGAAAAGACAGTTGACACAGTTGTTTGAG ATATCTCTTAGGGAAACTGTACCTGGTGAGTCAGATGTAGTGCCATTAGTTGATTCGTGCAGTGAGAAATCTGGTGTGAAACATGGTGATTATCAATGTA ATAATGCGATGGTTCTATGGGCTAAGATAAAAGGGAAGCAGACAGGATTCAGGGGTCCCCCAGCTGTTGGACAGGCCATCATGAAAAATCTCCCTCCATC TGAAATAATAGAATCATGTTCTGTAGCTGGTCCTGGATTTGTGAATGTTGTTTTATCAAAGAATTGGATAGCACAGAGCTTACATAGGATGCTAATTGAT GGTATTGATACATGGGCACCGCGACTTCCCCTCAAAAGGGCTGTGGTTGATTTTTCCTCACCTAATATAGCAAAGGAAATGCATGTTGGTCACCTGAGAT CTACCATTATAGGGGACACATTAGCTCGTATGCTTGAATTTTCACATGTGGAAGTTCTCCGCCGAAATCATGTTGGCGACTGGGGAACACAGTTCGGGAT GCTGATTGAATTTCTCTTTGAAAAATTTCCAATCACAGAAGAAGCTGATGAACCAGACATTGGAGATCTTCAGGCATTCTATAAGGCCTCAAAATTGAGA TTTGATAGCGATCCTGAATTTAAGCAAAGGGCACAACAGGCTGTGGTCCGGCTGCAGGTAGATTATACCCAACGAGTTTTCCTGTTTTTCTATTCCCGAG GAGGTAAGACTGCATACATCTATCCTCCCCAGATCCCACTAAGTGGGAGCCTAGTGCACTTTGCGGCACTTTCTATTCCAGAGATCTCGGGATTTTTTTC CAAGTTTATGCACTAATTCTGATTTTGTTCAGGGTGGAGAAGACAGGTATCACAAGGCATGGAAACAAATTTGTGAAATTAGTAGGACAGAATTCCACCG GGTCTATGAACGCCTAGGAATTAAATTGGAGGAAAAGGGAGAGAGCTTCTATAATCCATATATCCCTAAGGTTTTGGAAGAACTAGACAGTAAAGGACTG ATTGAAGAAAGTGAGTGCGCTCGTGTGATATTTGTTGACGGTGTAAATATACCGCTTATTGTTGTGAAGAGCGATGGTGGCTACAACTATGCTTCAACTG ATTTAGCAGCACTCTGGTAACTTTCCTTTTATAAATCTATTGTTAAGTCAAGATTTTCTTATTTCAGATATCTATTTACTCCGCCTTTGATGTGAAATTT CGTATACCTAGTTCTACTTGTCTACTTTTTTACATTTTGAACTAAAGTGGAAATAAGTTGACCGAGGAAAACATACTGTTTTTGTTATCTATGCTACTTG AGCCATGTAGGTATCGGCTAAACGAAGAAAAAGCTGAGTGGATTATATATGTTACAGATGTTGGGCAGCAGCAACACTTTGATATGTTTTTTAAGGTCGC TAAGCGTGTAGGTTGGCTACCAACTGATGATAGTCTGTATCCAAAAGCAACTCATGTAGGTTTTGGTCTTGTTCTTGGGGAAGATGGAAAACGATTTCGG ACTCGCAACACCGATGTTGTTCGATGAGTTGATTTACTTGATGAAGCCAAGAGTCGCAGTAAAACTGCTGTTCTCGAACGTGATGTTGCTAAAGATTGGC CCGAGGAGGAGGTTGAGAAAACGGCAGAGGCAATTGGTTATGGTGCTGTTAAGTATGCTGATTTGAAGAACAACAGATTATCAAATTACACATTCAACTT TGATCAGATGCTGAATGATAAGGGCAATACTGCTGTTTATTTGCTGTATGCACATGCTAGGATCTGTTCCATTATCAGGAAATCTGGTAAAGACATAGAA GAATTAAAGAAGAATGGGAAAATAGTGTTGGATCATGAAGGTGAACGTGCATTGGGGCTTCATTTGGTACAATTTTCTGAGGTTGTTGAGGAGGCTTGCA CCAATTTATTGCCCAACACTTTGTGTGATTACCTCTATAATTTGGCTGATATCTTCACCAAAAAGTTTTATTCCAATTCTCAGGTTATAGGGTCACCTGA GGAAACTAGTAGGCTGTTGCTGTGTGAAGCAACTGCAACTGTGATGAGAAAATGCTTCTATCTCCTTGGAATTCAACCTGTTTACAAGATATGACCCATC TGAATAAAGTGGAGTAAAATGTAAATTTTTTGCAACTTGCATTTTCTTTTTATTCCACTAGTGTATGAAACAACCTCAATCAATTGTTCTGCCAATTTTA GTTATTTGCATTTTAGTGTGAAAAAAAGGTAAAAATAGTGAATGCTGAATAGCAGTTTTACTGATAAGGTCCAATGAAATTTGTTTAGATGCTATATATT TGGTTGAGAAAAGAGCTTTGCACTGTTAAAA
• Tissue: flowers
• Gene name: LI_gene_79156;
• Additional information: details;

Expression of Ll_transcript_178917

FPKM

• FPAB: 0.6
• FPNAB: 0.1
• LF1: 0
• LF2: 0.2
• LF3: 0.5
• LF4: 0
• UF1: 0.6
• UF2: 0
• UF3: 0.2
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_178917

• Blastp: Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 70.71% of identity
• Blastx: Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 79.62% of identity
• Eggnog: arginyL-tRNA synthetase(COG0018)
• Kegg: Link to kegg annotations (AT4G26300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455445.1)
• Pfam: Arginyl tRNA synthetase N terminal domain (PF03485.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;