| Id Trinity | FTRINITY_DN58681_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_178893 |
| Sequence | AGAGCACGGCACAAAACGGTCAAACATATGACTAAAACGACAAAGGATTTTTGTTTGTGGAAGAGTGAAGAAAAAGTACGATGCTGTTAGGGTTCATAAA TACCTTAACCCATTCACACTCCTCTCTCCAATTCATTCCACTCTCTCATTCTCACTCGCTACCATTCCCTGACAGTTTTGCTGAAGGTTGCATCTAGGAG ATTTGCTTTAACAGCAACTAAGACACAATTCATATCAACCATGTCAGTTGGTGAAGATAACGTGAGCAGCGTGAAAAGACAGTTGACACAGTTGTTTGAG ATATCTCTTAGGGAAACTGTACCTGGTGAGTCAGATGTAGTGCCATTAGTTGATTCGTGCAGTGAGAAATCTGGTGTGAAACATGGTGATTATCAATGTA ATAATGCGATGGTTCTATGGGCTAAGATAAAAGGGAAGCAGACAGGATTCAGGGGTCCCCCAGCTGTTGGACAGGCCATCATGAAAAATCTCCCTCCATC TGAAATAATAGAATCATGTTCTGTAGCTGGTCCTGGATTTGTGAATGTTGTTTTATCAAAGAATTGGATAGCACAGAGCTTACATAGGATGCTAATTGAT GGTATTGATACATGGGCACCGCGACTTCCCCTCAAAAGGGCTGTGGTTGATTTTTCCTCACCTAATATAGCAAAGGAAATGCATGTTGGTCACCTGAGAT CTACCATTATAGGGGACACATTAGCTCGTATGCTTGAATTTTCACATGTGGAAGTTCTCCGCCGAAATCATGTTGGTGACTGGGGAACTCAGTTTGGGAT GTTGATTGAATTTCTCTTTGAAAAATTTCCAAACCCAGAAGAAGTTAATGAATCAGCCATCGGGGATCTTCAGGCATTCTATAAGGCCTCAAAAGTGAGA TTCGATAGTGATTCTGAATTTAAGCAGAGGGCACAACAAGCTGTGGTCCGGCTACAGGGTGGAGAAATCAGGTATCGCAAGGCATGGAAACAAATTTGTG AAATTAGCAGGACCGAATTCCACAGGGTCTATGAACGCCTTGGAGTTCAATTGGAGGAAAAGGGAGAGAGCTTCTATAATCCATTTATCCCCAGCGTTTT AGAAGAACTAGGTAATAAAGGACTGATTGAAGAAAGTGAGGGTGCTCGTGTGATATTTGTTGATGGTGTAAAGATACCACTCATTGTTGTGAAGAGCGAT GGTGGTTACAACTATGCTTCAACTGATCTAACAGCACTCTGGTATCGGCTAAATGAAGAAAAAGCTGAATGGATTATATATGTTACAGATGTTGGGCAGC AACAACACTTTGATATGGTTTTTAAGGCCGCTAAGCGTGCAGGTTGGCTGCTAGCTGATGATAGTTTATATCCAAAAGCTACTCATGTAGGTTTTGGTCT TGTTCTCGGGGAAGATGGAAAACGATTTCGGACTCGCAACACTGAGGTTGTTCGATTGGTTGATTTGCTAGACGAAGCCAAGACTCGCAGTAAAACTGCT GTTCTTGAACGTGATGCTGCTAAAGATTGGCCTGAGGAGGAGGTTGATAAAACATCAGAGGCAGTTGGTTATGGTGCTGTTAAGTATGCCGACTTGAAGA ACAACAGATTATCGAATTACACATTCAATTTTGATCAGATGCTGAATGATAAGGGCAATACTGCTGTTTATTTGCTGTATGCACATGCTAGGATCTGTTC CATTATCAGGAAATCTGGTAAAGACATAGAACAAGTAAAGAAAACTGGGAAAATAGTGTTGGATCATGACGGTGAGCGTGCATTGGGGCTTCATTTGGTC CAATTTTCCGAGGTTGTGGAGCAGGCTTGCACTAATTTACTGCCCAGTACATTATGTGAATACCTCTATGATTTGTCAGATATCTTCACCAAAAAGTTTT ATTCAAATTGTCAGGTATACTTCTAAAACCATCAACTATGATAATTACATTTACCTTGACACATGTTAAAGATGGTATACTACTACATATCATTATTTTG CTAACTACCTTTTGGTGAATTATCAGCTGAATATTCTGTCCTGTCCATAAATTTTTCTCAAAATTTTACTTCCAGTGGGTAGAATAATGTTTATATTAAT ACAGCAATAACCAAATCTTTATCATAGTAGGTGGGGTCGGCTATATGGACCGAATCACAGTGTATCATAAATCGTGTAATTTTATATTAATAAAGGCATC TAATTTAACTTTTTGCACTGGGCAGGTTATTGGGTCGCCTGAGGAAACTAGTAGGCTGTTGTTGTGTGAAGCAACTGCAATTGTGATGAGAAAGTGCTTT TATCTCCTTGGAATTGAACCTGTTTACAAGATATAAAGGGTTCACATACATTTTTAACTTGTAACAAGAAAATTCATGTTATGGATTCTACTCGAAACAA AAAAAACTGCAACTATACAGTGTCATTTTGCAATCTCAATCTTCAAAATAGTCTACAAATATGTTTGTTAGATGGCAGTTTTTAAGATACAACTACCAAG AAAGAACAGAAAATTGTGCTCATGTAGCATTTGCAATAACAAGCCATTTAGAAATCAGAGTTTAGATATTGCCATTTTCTAGTTTTTTATATTTACTTTT CTCCATTTTTCTTTCTACCAAACTCTATCAAAATTGTGATTATGCTTAGACAAGTATTGAGATGATATGATAATAAGTGAAATATATATATATATATGTG TATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79156; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_178893
| Blastp | Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 75.13% of identity |
|---|---|
| Blastx | Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 72.53% of identity |
| Eggnog | arginyL-tRNA synthetase(COG0018) |
| Kegg | Link to kegg annotations (AT4G26300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458196.1) |
| Pfam | Arginyl tRNA synthetase N terminal domain (PF03485.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |