Id Trinity | FTRINITY_DN58701_c0_g2_i27 |
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Name Transcript | Ll_transcript_36180 |
Sequence | CATCTCTCTCTCTGTTTCTATTCTGTTCTTGATTGCATGCACTTTCTCTCTTACTCACACAACTCATTCATCTCTAGCTAATTCCTATTTGTTGCTACCC TCTTCGCTTAAACGTTAGTAGTAACACCACCATACCTTAACTCTGTGCATGGTTGCAGTGTAGATGTTGAATCTGCATAACCATCACAAATGATAGGGAG GGAGACGTTGATTTTATTAATCTTGAATTTGAATTGAATTGAAATGGAATCTGAAGTTTGCATGAATGGTTCGTGCCGCGGTGTCGGGCATGAACGTGAA TGGAAGCAGGGTTGGTCTCTGGAATCTGGTGGATTTGCACGTCTTTGCAACAATTGCGGATCTGCTTATGAGAATTCAATCTTCTGTGAGAAATTCCATC GTGAAGAGACTGGGTGGAGGGAGTGCAGCTATTGCAACAAGTCTATCCACTGTGGATGCATAGTATCATTGTCTTTGTTCAAGCACCTTGATTTTGGAGG TATAGGTTGTGTTACTTGTGTGAAGACTTCCCAACACTGTCTGGATATTGAAAATCCTAATGTGTCTTTGATGTCAACCAAAAGTAATGCAAGTAATCGG CATGCTGCTCATAAGGATGATAGACTGTCAGTGGATAGTGTTGATGAAGGGAGACTTATGCAACTGTGTAGAATTATTCAAGCTACTGAATCAAGCCAAT GCCCTCAAGCTCAGAGAGACGGCACAGTTTCACGTATTGATTCAAACAGCCAAGAAGTTAAGTGTTCATTCAGGGAAGCAGATGCAAGATTTTCGAAAGT GATGAAACCGTCAAGACATACATTAACATCTAACTCATTAGGAAACAGTAGACCAGCATGGGAGAATAAAAATATGCATGATGCACTTGCACTAAGTATG TCACTGGGAACCCCATCAAAAAACACTGTCCTGCCTTCTGCTACAGAGAAGGCAGAAGAGAGACTCGAGGGCAAAGAATCTCCCCCCTTTCATCAAGGGC AAAGGTCTCACCCTATATTGCCCAAACCATCGAAGACTGGACTAACCATGAATCTGGAAACAAATAATGGAATGATTTCTGAGGCATGCCTTCCCCGGCC ACCTGCCGAGTATAATGGCAAGCATCAGTTACTGCCTCGATACTGGCCCAAGATAACTGATCAAGAGCTGGAGAAATTGTCTAGGAATTTGAAGTCCACT GTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAAGCCTGTGCAGAGGCCTATTTTCCTCATA TTTCACATTCAGAAGGCCTTCCTTTGCAGTTCCAAGATGTGAAGGGGAATGAGTGGACACTTCAGTTCAGATTTTGGCCTAATAACAATAGTAGGATGTA TGTTTTGGAGGGCGTGACACCTTGCATACAGTCCATGCAATTAAATGCTGGTGATACTGTAACATTTAGTCGGATAGATCCTGGAGACAAATTTGTTTTG GGTTTCAGAAGGGCATCAAGTTCTACCGATACACAGGATGCCAATGCATCTGCTCAATCTAATGGCATCTCAACGGAGGAAACTGTCACTGGTCCAACTC AGAACCCACGATCAAGAAGTAATTGTCCAGATCTTCTGTCAAAGAAAGAGATGGTGGAACCTCACTTAAATGGGCATCCAGAACATCTGCATTTGGGTAC CGGAGGTGATAAAAAATGTGAGATGATAAAAAATGATCTGTTGTGGCAACCGATTTCAGATTCAGAGAAGAGGACTCGTAATATTGGGCCTAAAAGTAAG AGGCTGCTCATTCATAGTGAAGATGCAATGGAGTTGAGACTTACATGGGAAGAAGCACAGGGCTTGCTTCATCCACCACCTAGTGTCAAGCCAAATGTTG TAACAATTGAGGACCAAGAAATTGAAGAGTATCATGAACCCCCGGTTATTGGAAAGAGAACTATATTCAATGCCAGTCCAACTGGGAGGAAAGAACAGTG GGCTCACTGTGATGATTGCTCTAAATGGCGCAGGGTTCCAGTAAATGTTCTTCCTCCCAAGTGGACATGTTCTGATAATGTTTGGGATGCAAGCAGGTCT TTATGTTCTGCACCAGAGGAGCGGAGTAGAATGGAATTAGATGATCTTCTGAGAACCAGCAAAGTTTCTAAGAAGCGGAGAAGGCTAGAAAAGAGCGAGT CAATTGAAGAACATGAGCCCTCTGGCTTAGAAGCTCTTGCCAATGCAGCAGTTTTGGGGGATATTCTTCTTGACCCTGCTGAGCCATCATCTAGAGTCAC CACAAAACATCCGAGACACCGTCCTGGCTGCACTTGCATTGTGTGCATTCAGCCTCCAAGTGGGAAAGGGAAACATAAACCAACATGTAACTGCCTTGCA TGCATGACAGTGAAGCGCCGATTCAAAACCCTTAAGATGCGCAAGAAGAAATGCCAATCAGAACGTGAAGCAGATGCATGTGCTTCCCAGAAAGATCAAA TCCAGCAATGGGATGAGCCAGATGCCAATAGAGCATCAAAAGATGATACAAGTCAATTAGATCAACCCAGTGCTGCTGCACATATGGATCCGGGTTGTGA TCCCAACTGCGAAGACATGCCAGTCGATGATATAGATATTCCGGGACGTAGCGCTTGACCGATCAAAGACAAAAAATATCTCTTTACCTTTCTACACAGT ATAGTTTGCTACCCCTTTCAAAGGGGTGGTTAAACATAGTTTTTCTTTCATACAGAAAACATATAAAATTCTATTTTCTTCATATGAATGAGACTGGGAA TGTGCTCTTCATCGTTCAGTTTTAAGAATGGAACATAGGTTGTGCAACCTATTACAATGTTATTACTTGCTGTCTAAGGAATTTATAGATTAGAAAACGG CTTTTAGGTTTCTGCATTTAGGATTGTGCTGAATATAAAGACGAGTCTAGTAGTGTAAGGCGCCACTGGATCCCATGATCGAGAGTCTCATTCTTGGGAG CGACATTTGTTAGGAGGAGGAGCCATGAATCCCGAAAGAGATCAATATATTCTTGGCAGTACAAAAAAATATATGTTTGGTAGTCTCTCATTTTACATGC ATAGTGATTTAAAATAATTTGAAAATAAATAATAAATATTTAATTTATGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_79322; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_36180
Blastp | B3 domain-containing transcription repressor VAL1 from Arabidopsis with 48.6% of identity |
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Blastx | B3 domain-containing transcription repressor VAL1 from Arabidopsis with 48.41% of identity |
Eggnog | B3 domain-containing protein(ENOG410Z235) |
Kegg | Link to kegg annotations (AT2G30470) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455742.1) |
Pfam | B3 DNA binding domain (PF02362.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |