| Id Trinity | FTRINITY_DN58704_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_33285 |
| Sequence | ATTAATTCTTTGGAGGGCTTCATAATAAAAGTGTCTTTCCAAAAAATGAAGACTTATACAGGTAGTAAAAAGAAAATTGATAGGAGTAAGGCATGTGAGG CTAATTGTGTCTGAAAGAAGTAATTTCGTTTTCATGTGTCTGTCTCTTTCTCTTTCTCTCTTTTCTGTTGCAATTCCTCAGATCCAATAACACAAAGCTA CAATGAAAACAATGAAGTTACAAAACACAAACCCAGGGTAAAGAACAGAAAAAGCTAGCATCAAAATGGCATAAAAAGAAAAGGTTGTAGTGAGAGGCAG CAACTACATATTAAGACCAACAAAACTGGTTCATAGTATTGTTCTGCCATCAACTTGGTCTTTTTTTCTGTTATAGATATGGAGGGGGCAGAAGAAGATG AGCAAGGGAACAAAGCAAACTAGGGAGATAAAATTTCTTGGTGATGGGTCTTAGTTTGAAGATGCAAAGCCACAATCCTGTGGCTTTAAGGTTGCATGAT CAAATGGGGTCTAAAAGAAAGTACACTTTCATTCAGGCACATAGAGCTTGGCTACCAAAGTTTTTGCTTATGTGGATCCTTCTAATGGCTATAATAAGTT GGTGGATATATAGTAAAATGGATGCTGACACCAAAATCAGAAGAAAAGAGGTGTTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGTTGCAAGATCAGTT TAGTGTTAGTGTTAACCATGTTCATGCTCTTGCAATCCTTGTCTCAACCTTCCATTATTACAGATACCCTTCTGCAATTGACCAGGAAACCTTTGCTGAG TATACAGCTAGGACAGCATTTGAAAGGCCATTACTGAGTGGTGTGGCCTATGCACAAAGAGTTGTTGATTCAGAGAGAGAAAGATTTGAGAATCAACATG GATGGGTCATAAAGACAATGGAAAGAGTGTCTTCACTGGTTAGAGATGAGTATGCACCAGTTATATTTGTGCAAGAAACCGTCTCATACCTCGAATCTAT TGATATGATGTCCGGGGAGGAAGACCGAGAAAACATTTTGAGGGCAAGGGCCACCGGGAAAGCAGTTCTGACTAGCCCTTTCAGGCTGTTGGGTTCTCAT CATCTTGGTGTGGTATTAACATTCCCTGTTTACAAATATAAGCTCCCTCCAAAGCCAACAGTGGAAGAACGCGTTGAAGCAACTGCAGGATATGTTGGAG GATCTTTTGATGTTGAATCCCTTGTGGAGAATTTACTTGGGCAACTTGCTGGTCACCAAGCAATTTTGGTGAATGTATATGATATCACCAACTACACCAA TCCCTTAATCATGTACGGTAACCAATACGAAGAAGGCGATATGTCTCTTGCCCATGAAAGTGCCCTAGATTTTGGAGATCCATTCAGGAAACATCAGATG ATATGCAGGTATCATCAGAAGGCACCGATAAATTGGACAGCACTTACCACGGCATTCCTATTCTTTGTGATTCTTTTATTAGTCGGCTACATTTTATACG GTGCTGGAAATCATATTATCAAAGTTGAGGATGATTTCCATGAAATGCAAGAATTAAAAGTCCGAGCAGAAGCAGCTGATGTTGCCAAATCGCAGTTTCT AGCTACTGTATCTCATGAAATTAGAACACCAATGAATGGCATTTTAGGAATGCTTGCTCTGCTTCTAGATACAGAGTTGAGTTCAACCCAGAGAGATTAT GGTCAGACTGCTCAAGCATGTGGAAAAGCACTGATAACTTTGATAAATGAGGTTCTCGACCGAGCTAAAATTGAAGCTGGCAAGTTAGAGTTGGAGGCAG TTCCATTCGACCTTCGTTCCATACTTGATGATGTCCTTTCTCTTTTTTCGGAGAAGTCTAGGCACAAAGGTTTAGAGCTGGCAGTGTTTGTCTCGGATGA AGTTCCGGATATCGTTATGGGCGATCCTGGGAGATTCAGACAAATAATAACAAATCTTGTTGGCAACTCTGTTAAATTTACTGAACAAGGACATATATTT GTTAAAGTCCACCTTGCAGAAAGTAGGAAGTCCACAATGCATGGAAATCATGAGACATTTGTCAATGGAACATCTGATGAAGTTTTTCATATTTCTGGTG ATTATCATTTTAAAACCTTAAGTGGATGCGAAGCAGCTGATGAACAGAACACATGGGATAATTTTAAGCATCTACTTGCAGATGAATCCTCTAGTAAAAT AGTGGCCTCGTGTGAATTTTCCGAGCAAGTCACCTTGAGGGTCTGTGTGGAGGACACTGGAATTGGAATTCCTTTCTCAGCACAAGATAGTATTTTCATG CCCTTCGTGCAGGCAGACAGCTCAACCTCTCGAAACTATGGCGGTACCGGCATTGGCTTAAGTATCAGCAAGTGTCTGGTTGAACTTATGGGTGGTAAGA TAAACTTCATAAGCCGGCCGCAAATTGGAAGCACATTTTCATTTACTGCAGATTTTGGAACGTTTAAGAAAAATCCGACAACTGATGTAAAGAAACATAA TTTGGAGGACCTGCCTTCTAGTTTTAGAGGGCTTAAAGCCATAGTGGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTA GGGATACAAGCAAAAGTTGCAAATAACATCAACAAGGCTGTTTCTTTATGTGTGAAAAATGGTTCATTGACCTCAGGGTAAGTTTCTAAGTTCCATTTTC GGCTTTAATTATGAAGAAACTGAAAGTGGTAAACCGATAATGAACAGCATGCCTTACTAGAATGTCAAGTTGCCATATAGACTTTTTCTGTCGAAGTGGA TTTTCAGGTGTTTTTGTTTGACGTCGTTGTAGAGTTATCTTCAGTTTGATGAAAAAACTACGCCATTTTGTTTCCGAATGTATCTTTACAACACTTTTTA TTTGAAATTGTTCTATTTCTCCATTCTATTGCTTATGCTATTGTTCTAACTCATAAAATAAAGTAAGAAACTGCATTAACTGATAGTTTCTTTTAAAAAA ATTATTTACAGATATTATGTGCCTTCTTGTGAATAAATGTACTTAGGACTAGGTTTTTCTTCACTGTTCTTTAATATGTATACATATTTACTTTGACCAA CATTCTCATGACATTATGATGATTTTTATGTTGTCTCTTATGTCTGTCTATTCAGACATCAAAAGAAAACAATAATTAAGCTATTTGAAAGACTGCCATT TGGAGAAGATATCGAATAAGAATACTTTTTTTATGTTGTGGTTCAGTTCATTCACTGATTAAATCTACTTGAATTTCAGATTATTTCAGCCTGATATTAT TATTGTCGAGAAGGATTCGTGGGGTTCTGGAGAGGATGGTACATTCTTCAATGTGTGGCAACTGGACTGGAAGCAGAACGGTCATGTGTTTAAGATGCCT CAAGTGATCCTTCTTGCCACCAATATCAGTAACGCTGAATTCGACAATGTGATAGCTGCAGGTATCTCGGATACAGTGATCATGAAGCCTCTGAGAGCTA GTATGGTGGCTGCATGTCTTCAGCAAATTCTAGGGATGGGGAAGAAGAGGCAGTTAGGGAAAGACAACCCTCATGGTTCTACTTTTCTACGAAGCATTCT TTCCGGAAAGAAAGTTTTAGTTGTTGATGACAATGTGGTAAACCGGAGGGTCGCTGCAGGCGCGTTAAAGAAGTTTGGAGCTGATGTGAAGTGTGCAGAA AGTGGCAAAGCTGCTCTTGAAATGCTTCAATTGCCTCACAGTTTTGATGCTTGCTTCATGGATATTCAAATGCCCGAAATGGACGGGTTTGAAGCAACAA GGCGAATTCGGAAGATGGAGAGCAAGGCAAATGAAGAGATGAATAGTGAATGTATTGAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79349; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_33285
| Blastp | Histidine kinase 4 from Arabidopsis with 73.35% of identity |
|---|---|
| Blastx | Histidine kinase 4 from Arabidopsis with 73.35% of identity |
| Eggnog | Histidine kinase(COG0642) |
| Kegg | Link to kegg annotations (AT2G01830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420417.1) |
| Pfam | CHASE domain (PF03924.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |