| Id Trinity | FTRINITY_DN58718_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_34537 |
| Sequence | ACCTAATATAATCTCTTAGCTAAAAATTCAACCACAAATTTTGGGAAATAAAGTTCCTCAGCTTATTTTTGGAATATATTTAAAAAGGCATTGCAACAAT TTTCCGAAAAAAACAAGACAGAAGTGACAAACACAGAAAAAAAACATTTGCGGTTTATTTTAGCTGAGGAGGTCTCAGGAGGTGAGAAGCGTTGTTCTCA TCATCACCATCCCTGAGAACTCACAACCCCCAAGTTTGATTCTTCCATAAATAACATATCTTTCTAAATACCCACTATTCCTTATTCCCAGATTCCTCAT TTTTCATTTTCTTCTCATTTCTCTCTCTCCAACAATGGCCTCTTCCGACCCCTTCACCGACAAGAACATCGTGTTCCGTAAGCTCAAGGCAAAATCTGAA AACAAGATGTGTTTTGATTGCAATGCAAAGAACCCAACTTGGGCTTCTGTGACCTATGGGATCTTCCTCTGCATCGATTGTTCTGCTGTTCATCGCAGTC TCGGTGTCCATATCAGCTTTGTCAGATCTACAAATTTAGACTCATGGAGTCCTGAGCAACTAAAAACGATGAGCTTTGGAGGAAATAACCGTGCACAAGT TTTCTTTAAGCAGCATGGTTGGAATGATGGTGGTAAAATAGAGGCCAAATATACATCAAGAGCTGCAGAATTATATAAACAAATACTATCTAAGGAAGTA GCTAAAAGTATGGCTGCTGAAGCAGATTTACCATCATCTGTTGCTTCTCAGTCTCCACAAGTGACTAATGGACTTCCTGAAGTTAGGACAAACGAAATAC CAAAAGAAAATAGTCTGGGGAAGCCCGAAATGCCTGAGAGCACTTCTTCACCAAGAGCTTCACATACAATAGTTTCCAGTACAGTAAAGAAATCTATTGT TGCTAAAAAATCTGGGAAGACTGGGGGGCTTGGAGCCCGGAAGCTTACTAAAAAGCCAAGTGAGTCTCTCTATGAGCAGAAGCCAGAAGAACCACCTGCT CCAGTCTCTTCCCCAGCAATAAAAAATTTGCCTACTGTACCACCACAGCCATCTCGGTTTGGGTATGTAGAAAATGTCCAGTCATCTGATTTGAATTCTA GAGCTGGGGATACAGATGTGCATGGTCATGTGTCTGTACCGAAGTCATCGAGCTTCTTTGCAGACTTTGGAATGGATAGCGGTTTTCCAAAGAAGTCCGT GTCAAATTCCTCAAAAGTGCAAGTAAGCCACATAGCTGCAACATTTTAAAGCTAGCATGATGTAACTTAACTGCATTTGATTAGCCTAGAGAATTAAATT ATATTTGATTCTATTCAAAGTTGAGCTTCCTCTCTCTATTAAGCTACAAGCTTTTAACAAATTATGGCTTGAGATAGCAAAGCATACTGGTCACAACTGT TTGAAACAATGCTATACACTTTTTATCTCTACTACTAATGAGGAGAAATATCAAGCTGTTTTCCATCTTCAGATTTCGGCACCAAAATTTCAAAATAACT CCTATCCTTTCATCTCTTCATCTCCAAATTAATTTTGAAATTGAACACAAATATGTCATTTCTGCATTCATTACTGAGTCTTTATTGAAATAATTCTCGA ATGATGAAAGTTGTAACATTATCAATTTAATTTCCATCTTGCTCACTGATTTCTTTCACTATTTCATGCATTCTCCACACTTTCCTTATTATTCTCCTAC TTCTTCTATAATCTTTTTCCGTTTCTGTTATCATTATTTACATTCTTTCTTTGTATACACACCATACTGGTGTTTTATTCCTGGTAAAAAAGGAGATGTG CTAGCACACACATGTAGAAACATGTATTAAGCATTCTATGTTGATTATATAAACAGTGTGATTGACAAGTATGTTCTGATGGTTGTAAGAATGTATTATT ATTTATTTTCCATCCATTTAATTTTTCTCAACTTTTATATTTTATTAAGGTGTTTTCTTCTTGGGGACAGAGAATGGGTTGTGCATCTTATGCATATTGC TTAGGTTGATAGATTGTTGGGATGAAACTATACCTATGGTATGTAATATGCCATACGATGTTGAGCACGTGCTGAGGATTTGGTTGAATAGTGTCAGTTA TATATATATATATATATATATTGCAGTGTATTAGTTGCTTTAATTATGGTATTTATTTGTGAATTTTGAATATTTGCTTTAAAATACCTGCTTTTGATGT TGTAATTACACCCTAATGTCATTCCATGTCGAATATATTCTGCTTTTGGTATTGTAATTATTGCATTATCTCAAGGATAGCTTCTCGCCTTCTCCAGTTT GCTGTGTGGCAAATTTATGAAAGTGTAACCTACTTTTAGATGCAAGATTGCTTCTTCTATTAGACTCTTATTTGCCATTCTTGGCCTTTTGGATTTTTAA TTGGCTTGAAATTTGAGTTATTACCTATATCAAACTGATATTTTTGAAAAACGCTGATGAGTGATGATAACAAATTGAAGTGGGTCTGTTGATATTAAAT GTTCATGGAGGATGGCATGCTTTTACTCTTATGAACATTCAACAATATTTTGTGGACAATATATAGGATATAATTACTCATCTGACTTCACCTGTAAACT ATGTACGCAGTGATAGATTTTAATTAATTCTGATCCTTATTTTGTTTTGGTACCCATCTTTTACTAGATTCAGGAATCTGATGAAGCAAGAAAGAAGTTC TCAAATGCTAAATCTATTTCTTCATCCCAATTTTTTGGAGATCAGAATAAAGCTGGAGATTTGGCTGCTCAGGCTACTTTGTCCAAGTTTTCCGTATGTA TCCTTTCTGTTAATAACTTGCTCGATCATTGTCTGAGTATACACATTTAGGTAGATCTTGGATGTTCAATACTGATTATGGGACTGCATCAGATTGCGTA TTTAAGATCTCATAATTTTCTGGCTGTTAGAATTCATTAATTGATATCTCGTTTCAAATGAAATGCTGAGATTGAGAAGGAACAGTCACACTTTCGAACT AGTAGCCACTCACAAAAAATGCAATCAAATTCTAGACAAGCATTTATGTTGCTGGGATCACAAATTTATTTTTCATTTTATGTTTGTGGCCAGCTGTAAT CTGTTTTATGTTCTGTGATAGTAGCCATGGAAAACTGTTATCTTGATAAGTACAAAACACCCCAAAAATTATTTCTGAAGGCTGAAGCAGACTCTGGAAA AAACTTTTATTGTTCCAATTCCCTACACCATTCTAAAGTCATGTCTCTAAGTGAAAACTCATGTGTCGGTGTCTCGTTAATATGTTTTATTGATAAAAGC TTCTTAAATATGTTTTCAATAATTAGCTTAGCTATTTTTCTTTATCATTATGATAATGTATGTAATTTAACTTATTATAGTTCTAAAAACCCATAATGAT GTGGTAAAACAGGTAATTTCCCATTTTAATGAATTGAGAAGGGTGAACTGTTTTCATGCTTTATGCAATAGCATTCTTATGTTTTATTGAAAACAACTTA TGACTTGTCACAAGCATGAACAACTTTTTTATTAGAAATTTTTATAACCCTGTAACGGGGTTGTTTTAAGGTTGATGTTTTGACAGAATTCTTCCTTTTG TTATTTCAAGGGTAAAACTGCCATCTCCAGTGCTGATCTTTTTGGTGATTCAGACTCTTCCATTGATCTTGCTGCTAGTGACCTCATCAATCGGATATCA TTCCAGGTATGCCTTTGGATTTAGAATCTTCATTGTTAATGTCCTCAATCACGTTGCCCATGACCTATGAAGCACAGACACTGCAAAATAGTAGTTGTGT CCCTGTCTCCGTGTCAGACTCATATTCATATATGACACTTCCGTACTATATACTCTACAACTTTCTACGTTTTGTTTTTGAATTTATACTGTTATGGATG GAAACGGCACAATAAATAAAACAATTCTTACATTTTATTATATTTACAATAACTCATGCCAGCTTTTAAACATTATTCCTCTCGTAGCTGTGTCATGTTT TATAATTTTTAAAAATTTGCCGGATCCTCTTGTCCATGTCGTATTATGTAAGTGTCCGGTGTTGTATCTGTGCTTCCTAGCTCATACCCTCCGGCCTCTG CCGTCTTTTATCTCTTGTTTTTCAGGCACAAGAAGATATCTCTTCCCTCAGAAACATTGCTGGAGAGACTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79455; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_34537
| Blastp | Probable ADP-ribosylation factor GTPase-activating protein AGD8 from Arabidopsis with 65.29% of identity |
|---|---|
| Blastx | Probable ADP-ribosylation factor GTPase-activating protein AGD8 from Arabidopsis with 62.33% of identity |
| Eggnog | domain, ankyrin repeat and PH domain(COG5347) |
| Kegg | Link to kegg annotations (AT4G17890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445317.1) |
| Pfam | Putative GTPase activating protein for Arf (PF01412.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |