| Id Trinity | FTRINITY_DN58725_c6_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_33120 |
| Sequence | ATGGAAGGAACGGTGTGTTGCCATGATGGGTTGTTGAGCGTGTTGGACTCAGTGTGTTGCGTTAACCAAACTATTCAGTAAAATAATAAATAAATAAAAG AAAGAAGAAGCAGATGAAAGATCAGTGGCACATTCATTCATACAAAAGTCATAACGTGAGTATCAAGAAATCCTTCTCACGAATTTCACGTTGGATTATA CATTGGTGAAGTAGGAATCAATCGAGTAAAAAGGGTTAAGGTTTCGATTGAGATGTCGGAAGAGGATTTGGTTGACATAAAATTCAGGTTGTACGATGGT TCTGATATTGGACCCTTTAGTTACTCTTCTAGCGCTACTGTTGATGTGCTTAAGCAAAGGATTGTTTCTGATTGGCCTAAAGGTAAAATTGTCATCCCAA AGGCAACAAATGAAGTGAAATTGATTAGTTCTGGTAAAATTTTGGAAAACAACAAGACTGTAGGTCAGTGTAAAGGACCACTTGGTGACATTGGAGGGGG AGTTTTAATAATGCATGTTGTTGTACAGCCATCTCTAGCAAAAACAAAAGGTGAAAAGAAGATTGACGATTCACCTAAGGTTATCTGCTCTTGTTCCATA TTGTGAATACAGTTCAATGAGTTGGAGATGCTCATCACTTGTTAACCACAAAAGTCACCTGCTTGAATAAACCTTTATATTTTCAGCATTCATGTGTAAA GTACGCATACGGGCCAATTATATGTTCATAAAAAAGTTTGTGTAACGTTGACTTCTGAAGATCATATCATTCTTTTATTACAAAGTTTAAAGGGTTGAGG GCATTAACCACTGATTGCTACCATTTTGTATGACCTTTTCATTTTGCATTTCCAATTATGCGTATGATATCATATGCCTTTGAGAGTGCTTAATCACTTA AGCAGTGTCACTGTTCATTTTTATTCGTATTTCAAAATTATCAATTACTAGGCACAGGCTGAACCCTTATATTCAGATCATGATGGAAATTGAAGTCTCT TTTCCTAGTCACAACTTATGCCTACAAGGGAAGGAATGGTGTCACCGTGTCGGGTCCTTGGCCAAGTCAAAGGGAGACTAGCTTCAGTCTTCCTTGCTGC CATCTTGTGGATTTAGCGTGTGCCAGAAACTCTGTATTAGAGGCAAGGTTCTTTATTTGCTGTAAGTTCTTTGTAACATTAAGTCTCTGTATTAGAGGCA AGGTTCTTTATGCTCTGGGGAAGAAAGTAAGAGGAGAAAAATATGTAACGTAGAGAGTGAAAAGAGAGGAAGAAATGAAAAACTGAATGGATTTTGTGTT ATTTTGTGGATCTCACTTCATTAGTTTGAGAGTTGAATTTTGGAAGAAAATAAAAAAAATGAAAGGTTTGAGAATCGTGAAATACACTCTCAAGTCTTTC ATTTCTTTCACTTCCCTCCAAAATCTTACTCTCAAAACTAACTCTTAAAGTTTCTTATCAGCCAAAGGAGAAAAAGATGATCATTCTCTTCATCTTTCTA CTATGCCAAAGAAATGCTTAAAGTTATGCATAAGTTATACACATAACAGATCAACAAATAATATAAAAGTTTCATACAATTGACTAAAATAATTTCGTTT AATTAAACTAGAGAAATATTGAATAAAAAGATAAGTAGTTGTTCCATCAAGAAATCAAGACCATTTTAGACCCCAAGTCAGAGTCTTACAGCATGCTCGC CCAGCATCCTGACAGACTGAAGGCAACTGTTCCTACCCGGCGTTCTGCATCCCATACAAATACGGACGCCAGGTAGGACCCATAGGACCTACACAAGAGT TGACTTGGGAGACACGTCATGCTACGCTGCCTGCATTTCATCAACTCTCCTGCCAACACGCCTAAAGGACAAGCAATACGGCTAGCAGACCTGGCAACAC GGTAGAAGGACGACAAAACGGCTCACAGGCCTGCCACAGGCTAAAAGACAAGCCGAGATAGAGTATGATCCTGCCAAAGCCGCCTGACAGGGGAAAAACA CCCACCGACAATACCCATGGTCGGACAAATGTGGTCTCACCTGTCAGGAGCCCAAAGTCAACTCCTCTCACTATAAATAGGCGTCCTCTTTAACAGGAAA TATTCTTTAATCTCTCTATCTCTTAACCTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79522; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_33120
| Blastp | Membrane-anchored ubiquitin-fold protein 3 from Arabidopsis with 77.12% of identity |
|---|---|
| Blastx | Membrane-anchored ubiquitin-fold protein 3 from Arabidopsis with 77.12% of identity |
| Eggnog | membrane-anchored ubiquitin-fold protein(ENOG4111561) |
| Kegg | Link to kegg annotations (AT4G24990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457771.1) |
| Pfam | Ubiquitin-2 like Rad60 SUMO-like (PF13881.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |