Id Trinity | FTRINITY_DN58733_c0_g2_i8 |
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Name Transcript | Ll_transcript_34962 |
Sequence | GTCTTGGTGATTTTGGACTTGCAAAAAAGTTAACTTCGGATGATCTTACTTCCTCTGTTGTAGGAACTCCTAGTTACATGTGCCCTGAGCTCCTTGCTGA TATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGTAAGTAGTCATGTATTATGATTTTTTCCATCTAGAAGCTTTTTATTATCTAGCTGAATATG TATTCGTGCTCTCGGAAACTGGTTATTCAGGATGCTGTATATATGAAATGACCTCTCTTAAGCCTGCATTCAAAGCATTTGTAAGTAATCTTCTTAATTG AAAAAGGTTTGTTTGTTTGAATATCATCTTCTTGGAGCATATTTAACACTTTCACCACTGCTTTTGTATTGCCAGTTTTTTATTTGTTACATCATCACCT CTTTTCATTTTATTCTCAATCAGATACCAATGTCTGTATATTAATTTGATTGTCATCACTTTTCCTTGTTTGCACATGTTTTTTATGACCGACCAGTAGA ATCAGTTTCTACTATTTTAGTGTCTCTGTATCTCCATTTGATATGTTGTGAAATCGTGCCAGAATCTTTTTTACTATGCTTTTCACAATTGATTATCAGC AGAGCTCATGCGGCTGCTTGGTTACACTTATATTATCTCTCAAAGACTTGAAAACTGCTTTAGTTTAATGCTTTTCATATGCTTTCTGCCAGCTTTGCTT TATGAAGTTATATGATTATCTTTTATTCTCTTCAAATAGGATATACAAGCACTGATTATGAAGATCAATAAGTCCATAGTGGCTCCGCTGCCATCAAAGT ATTCTTGTGCATTTCGAGGTCTCGTGAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGGCCTAGTGCTGCAGAGCTACTTGGGCACTCACATCTTCAACC TTATGTTCATAATATCCATCTCAAAATCAATAGCCCAAGGCAAAGTACATTACCTGGTCATTGGGAACAACCCAACTACATGAAGAAAACTAGATTTTTG AAGCCAGATGATTCTGTTTCCATCTATTGGGATAAGTGGCATTCTTTAAGCAATGATAAGACTTCAAATCCTAGTGTGTCTGAAGCAGATCAAAATTCTC TATGCTCTACCCGAGAAATAGATTGTACCCCTGATTATTTGAATCAAAGATTAGCCGAGCTGTGTGTTGGAGATAGCCATGAAGTGAAGTCAAACATTAA GCCAGTTGTTTCCAGAACTTCTGGTGTTGCTAAGACTCCAAGACTCACTTCATCAAAAGCTTCTGCCACCCACAACAAATCAATGAAACCTGCAAAGAAT CATAAGGAGCTTCCTATATCACACAGTACCAAACAACCTATCCACACAACTGGCAGAGCATCATTGCCGCTGCCAAGAAGTGGTGCCATTCAGCATCCTC CTCGAAGGGCCAGTATTGCTTTACCTAGCAATGTAAATTCACTCAGTATTTCGGTGAACGCTCCCCATATTGATAAGATGGCAGAATTTCCATTAGCACC ATATGATGATAATTTGTTTACCATCAGCAGACCTTTATCATCCTCTGCTCGTGATTCTTCAAACTTCCCTCTATGTAGCAATGATTCAACTATGATAGAC AAACGTACAGTCGATTTATGTGATATAGCATGCATCAAACCTAGTTCTGATACTTGGCAAGGAATCAAGCGCAGCATGTTCAAGGAAAAAAATGAGGACA AAAGTGGCTCATATGATAAAAATGCAACTGCTGGAGCATCAAGCCACAACTCTTCAGACTTGCACCGCCAGCAGTTTGACACTTCATCATTCCAACAAAG GGCTGATGCCTTGGAGGGGTTGCTTGAATTTAGTGCAAGATTACTACAGCAGCAAAGGTATGATGAACTGGGAGTGTTGTTAAAACCGTTTGGCCCAGGA AAGGTTTCCCCAAGGGAAACTGCTATTTGGTTGAGCAAGAGTTTCAAAGTGAACACTTTCAACCAGGATCAGTTGCCTAAACTGCTGTAATATGGGTTGT ATTCATGCACTCGTGCTTGTAGAGTTCGTGCTTCTTTCTTCTTCCACTGTGACATTCAGACAGCTGATTTATTTTAGTTACCATGTTTTCTCAATTACCC ACTTTTCACTTTAGTCTGATGATTAATGAGGAAGATTATAGATATTTTCATGATATGATAGCATTACCTGTCTGACTACAGGAATTAATTAAACTCAAAT TTATAATTTCAATATATTCCCTTCATTTAATGGAAGTTATAGACTTATAGGTAATGTCTGGTGGACATATCAAAACAAGTTAAAACATAATATATAACTT CTGCTCTTTGTTTAGTGTATTATATACACAGACCAGACCAGAACAGGATAGGACCAAAAAGTTTAGTAGTTGAAAATAAGGTAGATTTATTCAGAGGTGA TGGGGGCTAGTACCAGGAAAATCAAAAGGGCAGCAAGCATTGTAAATTATTATAATGGATGATTCAACATTAATATTCAAAATTGAATCACCTGCTTGTT CTGTAGCTTTAGCTAGGGAATTCAATAGTATGAATCACTATTAACCGTTATGTTGCCAGGGGAGTCGTGCCCGCCATCCTTTGTTGACCCATAGAGGTTA ATAATCCATTGGTCAAAGCTTCTTTGATTGAAGCGTGACGACTCAGAGGGAACACTATGCCTTGAACCATTAAGTGAGGTACTAAGATCATCAGTAGATT CTATAGACTTATTTTTGTGCCTCATTCCCTTTTTGGGTTGTTGTTTTGGTTCACTAAGAGACCTTGCTTTTGTTCTTGAAGATTGTGTCTTGCTCATGTA ACTTGGTGACAATGATTGGTTGTGAGACATTTCATGGGGCTCAGAAGTTGATAATGTTATTGTTGTTGGATTTGATTCAATGGGCCTGTAGTTTTCTGTT CTGTTTGCTGCTTTTTTTGAAGTATTCTCCTTGTATTGATGCTTTAGTTTTGAAACTAACATACTGTTTGAATAGAATGTCATGTGATCATGCTCCATGC TCTTCGCACGTGAATGATGTACAGGGGAACTTCTACTTTTCAAAGCTTCCAGCATTTCATCCATACTCATACCCTTTGAATGCTATATACATAATACTCA TATTACAGATTGTAGATGTGACAGATTGCAGCATAATAAAGTATGTAACTGAAACTCAGCATAAGGTAGTGTTTTGTATGTACCATAAACACATCAAATC AAGACGGAACAGAATATATGGTTCTGCTCTATGTTTTATTGTAATATGTAGGCAAAAACATAATGAACATTTCATTAGCTCCACTGAAAGAGGTGAAACA AAAGAGAATAGAATAGAAAATACCATTCTGTCCTATTCCATATTGTTCTGTGCATACACTAAATGCTTGATACCTAAAGTTTCATGTAGATAAATTTTCA ATGGGATTGACATATGAAAAATGCTCCAATACTTCGCTTCCATACATAATTATCTCACATATGCTCATGTGGGCTGAATCAGAGTGTAGCTATATAGAAA ACGAGATGTGGTCGTGGTCAAATATAATTAGATGGTGAATATTGTGCACATATGATTTATTATTTAAACAATCATAATATGCTATGACTTTGGGATTATT TTGTATACGCTTACTTTATTTTTTCTTGCGAGGCCCGTGTGGCGAGGAACTTCTCTATGTTGCAGAGGCTTTTTCCCATGAAGATTTGCTTCCTCAACCA TCTGAATTCTGTGAATCCGGGTTCTAACTTGGATCACCATCAACGCATGCATGCCACGAAGTGTAGCAGTTGTTTGTTTCCTTACAAGGTGACCCCTTAC CAGTGCCTGTAACTTGACTAATCCCCTTAAAGCATGCAATGCTCTCCTTGCCTGAAAATTTGCATTTAGCATGTTCATCAAAAATTTAGTACAAATGTTT GAGCCTAGGAAGAGTAATATAGTATGTAAAGAAAGCTGCCCGTGACCTTTTAGGGGGCATTTGGAAGAGTTTATTTGGGATTATCTGTAAAGCTTATTTC CTTAAGTTATCAAAATAGCTTATGATACTAGTTTATTTTAATAAGCTTATCAGAGAAGCTTATTAAAGTAAACTTATTTAATAAATACTTCATTAAATTG TTTATACCCAAATGTGCCCTAAGTCGTAGAGGCA BLAST |
Tissue | flowers |
Gene name | LI_gene_79604; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_34962
Blastp | Serine/threonine-protein kinase Nek2 from Arabidopsis with 43.9% of identity |
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Blastx | Serine/threonine-protein kinase Nek2 from Arabidopsis with 42.76% of identity |
Eggnog | NIMA-related kinase(ENOG410Y7JF) |
Kegg | Link to kegg annotations (AT3G04810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440501.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |