Id Trinity | FTRINITY_DN58736_c0_g1_i37 |
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Name Transcript | Ll_transcript_34198 |
Sequence | GTTTGGTTTTGGTAAGGATCAAAGTTGTTGCTCTCCACATTGCAAGGTGCTAGCAACACCCACACTATCTACAAAGACTCCATTATCCATCCTCCACATA CCCTTTTCACTGCAATGCCATCTCTTCATTTTACTACAATTTATGCTCTTTCTCACACATACTAATACTACATATACCCACAACCTCAAACTTCTCTCTC TTTTCTCTTTTCTTTTCCAACAAAAAACTATGATGACTTCTTTGATTCATTGTCCAGCACCAACTTCTCTGTCTGTAAATCGAGGAGGAGATTCTTTTGG GTTCTTTGTTCCAACCAACAATAACCGTTTCTCTAAGACCCTCAAGTCTCGTATTCGTTGCTCTTTGGACTCTAATGTTTCCGACATGAGTACTAATGCA CCGAAGGGGTTGTTTCCTCCAGAACCTGAACGTTATAGAGGACCTAAGCTGAAGGTTGCAATTATAGGAGCTGGGCTTGCGGGCATGTCAACTGCGGTGG AACTCTTGGATCAAGGGCATGAGGTGGATATATATGAGTCGAGGTCTATAATAGGTGGGAAAGTTGGTTCTTTTGTTGATAAACAAGGTAATCACATTGA AATGGGACTGCATGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTGATGAAAAAGGTGGGTGCCAATAACAATCTACTTGTGAAGGATCACACTCAC ACTTTTGTAAACAAAGGGGGTCAAGTTGGAGAACTTGATTTTCGCTTCCTGGTCGGGGCACCATTACATGGGATAAGGGCATTCTTGACCACAAATCAGC TTAAGACTTATGATAAGGCCAGAAATGCTTTGGCTCTTGCACTGAGTCCTGTCGTCAGAGCTCTTGTTGATCCAGATGGTGCATTACAGGACATTAGGAA TTTAGATGGTGTTAGCTTTTCAGACTGGTTTTTATCCAAAGGTGGTACACGTGCGAGTATTCAAAGAATGTGGGATCCAGTTGCCTATGCCCTTGGGTTT ATTGACTGTGATAATATCAGCGCCCGTTGCATGCTCACCATATTTGCATTGTTTGCCACAAAGACTGAGGCTTCTCTTTTGAGAATGCTGAAGGGTTCAC CAGATGTTTATTTGAGTGGCCCTATCCGGAAGTACATCACAGATAGAGGGGGGAGGTTCCATCTTAGGTGGGGATGCAGAGAAATACTTTACGGTAACTC AGCTGATGGGAGTACTTTTGTTACAGGACTTTCCATGTCAAAGGCCACTGATAAAAAAATTGTGAAAGCTGATGCATATGTTGCTGCCTGCGATGTCCCT GGAATTAAAAGATTACTTCCATCAGAGTGGAGGCAACATCAGTTTTTCGATAATATATATGAACTAGTTGGAGTTCCTGTTGTTACAGTGCAACTCAGAT ACAACGGTTGGGTTACAGAGTTGCAGGATCTAGAAATGTCAAGGCAACTGAGGAAAGCTATTGGGTTAGACAACCTTCTCTATACCCCCGATGCAGATTT TTCTTGCTTTGCAGACCTTGCACTTACATCTCCTGAAGATTATTACATCGAGGGACAAGGATCATTGCTCCAATGTGTTCTGACACCTGGTGATCCATAC ATGCCCTTACCAAATGATGAAATTGTTGGAAGGGTAGCAAAACAGGTTTTATCATTGTTCCCATCAGCTCAAGGTTTAGAAGTGACTTGGTCATCTGTTG TTAAAATTGGACAATCTTTGTACCGCGAGGGACCCGGTAAAGACCCATTTAGACCTGATCAAAAGACACCAGTGAAAAATTTCTTTCTTTCTGGCTCTTA CACAAAGCAGGACTACATAGACAGCATGGAAGGTGCAACCTTATCCGGCAGGCAAGCGTCGGCCTATATCTGTGATGCGGGGGAAGAGCTCGTGGCATTG CGGAAGGAGCTTGATGCTGAGTTTAAAGATGACCTTAAATTTTCAAATACTAATGATGAATTAAGTCTAGTATGAGATAATTTTGAAATTAAGTAGCTAC ATTAGCTTATAGTTTGTTCCATATACATGTAACATTTTATAATGTATATTCAATCCAAAAATGATTAAAAATTTAAGAACTTTTGGTCTCAGAGCAAGCG CTGCAATTTATAGTTGTAAAATCTGGTATCCTATAAATTGTGGTTCCTATACAGCATGTGACATTCTTAGCCCAAAAAATTTATTACTATTTTTTTCTTT ACTGCTGCAATTTTACATTAAAATTGTTTCATAATGCTCCAAGGACCGATCACTGTACAAGAGACATTGAAATAATTTAGTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_79625; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_34198
Blastp | Zeta-carotene desaturase, chloroplastic/chromoplastic from Capsicum with 82.14% of identity |
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Blastx | Zeta-carotene desaturase, chloroplastic/chromoplastic from Capsicum with 82.14% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (CAA61985) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428565.1) |
Pfam | NAD(P)-binding Rossmann-like domain (PF13450.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |