| Id Trinity | FTRINITY_DN58736_c0_g1_i41 |
|---|---|
| Name Transcript | Ll_transcript_34203 |
| Sequence | CTCGTGCAACACACGTAGCCTAGATACTCTAATCAACATTCATGCACATTCTTAAAAACACTACATATACTAACACATATAACCTCAGAAACACAATCGA AGTTGGTTATTGTTTTTTCTCCTCTCCTCTCAATAATGTCTTCTTTGATTCATTTCCCCGCAGCAACTTCACTCTCTGTAACTAGAGCAGGAGATTCTGT TGGGTTCTTTGTCCCAACCAGAAGAAACTGTTTCACCAAGACCCTCAACTCTCGGGCTCGTTGCTCTTTGGACTCCAATGTTTCTGACATGAGTACTAAT GCGCCAAAAGGGCTATTTCCTCCAGAACCTGAACGCTATCGGGGGCCGAAGCTGAAGGTTGCAATTATAGGAGCTGGGCTTGCAGGCATGTCAACTGCAG TAGAACTCTTGGATCAAGGACATGAGGTGGATATATATGAGTCAAGGTCTAACATTGGTGGGAAAGTTGGTTCTTTTGTTGATAAACAAGGAAACCACAT TGAAATGGGACTGCATGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTGATGAAAAAGGTGGGTGCCAATAACAATCTACTTGTGAAGGATCACACT CACACTTTTGTAAACAAAGGGGGTCAAGTTGGAGAACTTGATTTTCGCTTCCTGGTCGGGGCACCATTACATGGGATAAGGGCATTCTTGACCACAAATC AGCTTAAGACTTATGATAAGGCCAGAAATGCTTTGGCTCTTGCACTGAGTCCTGTCGTCAGAGCTCTTGTTGATCCAGATGGTGCATTACAGGACATTAG GAATTTAGATGGTGTTAGCTTTTCAGACTGGTTTTTATCCAAAGGTGGTACACGTGCGAGTATTCAAAGAATGTGGGATCCAGTTGCCTATGCCCTTGGG TTTATTGACTGTGATAATATCAGCGCCCGTTGCATGCTCACCATATTTGCATTGTTTGCCACAAAGACTGAGGCTTCTCTTTTGAGAATGCTGAAGGGTT CACCAGATGTTTATTTGAGTGGCCCTATCCGGAAGTACATCACAGATAGAGGGGGGAGGTTCCATCTTAGGTGGGGATGCAGAGAAATACTTTACGGTAA CTCAGCTGATGGGAGTACTTTTGTTACAGGACTTTCCATGTCAAAGGCCACTGATAAAAAAATTGTGAAAGCTGATGCATATGTTGCTGCCTGCGATGTC CCTGGAATTAAAAGATTACTTCCATCAGAGTGGAGGCAACATCAGTTTTTCGATAATATATATGAACTAGTTGGAGTTCCTGTTGTTACAGTGCAACTCA GATACAACGGTTGGGTTACAGAGTTGCAGGATCTAGAAATGTCAAGGTAATCTGCATTTTAGGGTCCATATAGAAACCATAATGTTAAATAATTTTGTTT TAAGAATTTGGAATGATGTATTTTCCTTCAATCGTTATTGCTGAACTTTATTATGAATCCTTACTTTCTGGATGGCAGGCAACTGAGGAAAGCTATTGGG TTAGACAACCTTCTCTATACCCCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTACATCTCCTGAAGATTATTACATCGAGGGACAAGGATCAT TGCTCCAGTAAGTGCATGTGTTTAAGGAAGAGATGATTTGTTTTTACATAAAATCTTGTGTGGCTAAGTATGTTATGGAAGAGATGAATCTGCATCATCT ATCTATCATGCAACTTGTATCTGATATTGCTAAACGCATCTGGTTTACTGGTTCATCCTTCTCATAACAAGTCTAACTTCCCATGGAATTAAAATTTTGT CAGCAGAATTCATATTATCTTCGATTTTATCTTGACCTTCAAAGTACATAATGTTATTTCATCTTTCAGATGTGTTCTGACACCTGGTGATCCATACATG CCCTTACCAAATGATGAAATTGTTGGAAGGGTAGCAAAACAGGTTTTATCATTGTTCCCATCAGCTCAAGGTTTAGAAGTGACTTGGTCATCTGTTGTTA AAATTGGACAATCTTTGTACCGCGAGGGACCCGGTAAAGACCCATTTAGACCTGATCAAAAGACACCAGTGAAAAATTTCTTTCTTTCTGGCTCTTACAC AAAGCAGGTAAGTTCAAATACCTTGCACCTTCTTAACTAGCATTATAATCGTGCTTGTCTTATGCATATACGATGTAACCCTAAAAAATGCGTGGATTCA AGAATTATTTTAGCTGAAATGTACGAGATCCTATAGTGTAGTCAGTTTAAATATGTCTAAAATTTCAGGAGTGCAAAATTTCCTAATGTGTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79625; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_34203
| Blastp | Zeta-carotene desaturase, chloroplastic/chromoplastic from Lycopersicon with 84.72% of identity |
|---|---|
| Blastx | Zeta-carotene desaturase, chloroplastic/chromoplastic from Lycopersicon with 77.17% of identity |
| Eggnog | Desaturase(COG3349) |
| Kegg | Link to kegg annotations (543629) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453327.1) |
| Pfam | NAD(P)-binding Rossmann-like domain (PF13450.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |