Ll_transcript_33816

• Id Trinity: FTRINITY_DN58738_c1_g1_i1
• Name Transcript: Ll_transcript_33816
• Sequence: CGAACGGAAAAAACAAGAAGACGATGGAAGCCTCTAGTACATTCTTGTTATTGTTGTTGGGAAACATCAAGAACCATTGCGATTCATCTTATACGTTAAC AAATACACTCCTTCTCATAACACCAAATACTGACTCATCTTTCATTCTTCCATTTTCACAAAGATTCCATCTTTATTACCCAAAGGTTTGAAATGAATCC TGATAAGTTCACTCACAAGACTAATGAGGCTATTGCTGGGGCTCATGCACTTGCATTGAATTCTGGGCATGCTCAATTCACTCCCCTACACCTTGCATCT ACTCTGATTTCTGATACCAGTGGCATTTTCTTCCAAGCAATTTCAAATGCTTCTGGTGAAGAATCAGCACGTGCTGCAGCAAGAGTGTTCAACCAAGCCT TGAAGAAACTACCAATACAATCTCCTCCACCAGATGAGATACCTGCAAGCACAACACTCATCAAATCCATTAGAAGATCACAAGCAGCACAGAAGTCGCG TGGTGACACGCACTTAGCGGTTGATCAATTGATTCTTGGCATTGTAGAAGATTCTCAGATTGGGGACTTGTTCAAGGAAGCTGGTGTTGCCACTTCAAGG GTTAGATCAGAGGTCGAGAAGCTTCGCGGGAAAGAAGGGAAGAAGGTTGAGAGTGCTACTGGTGACACAACTTTTCAAGCTCTTACAACTTATGGAAGGG ACTTGGTTGACCAAGCTTGGAAGCTTGATCCCGTGATCGGGCGCGACGAAGAGATAAGAAGGGTTGTGAGAATTTTGTCAAGGAGGACTAAGAATAATCC TGTTTTGATTGGAGAGCCAGGAGTTGGCAAAACTGCTGTGGTGGAAGGTTTGGCACAAAGGATTGTTAGAGGTGATGTTCCTAGCAATCTTGCTGAGGTT AGGCTTATTGCATTGGATATGGGAGCATTGGTTGCTGGTGCAAAGTATAGGGGAGAATTTGAAGAGAGGTTGAAGGCGGTTTTGAAAGAAGTAGAAGAGG CTGAGGGGAAAGTTATTCTCTTTATTGACGAAATTCATTTGGTACTTGGTGCTGGTAGAACTGAAGGATCAATGGATGCTGCTAATCTCTTCAAGCCTAT GCTTGCTCGCGGCCAGCTTCGATGCATTGGTGCTACCACTCTTGAGGAGTATAGAAAGTATGTTGAGAAGGATGCAGCATTTGAAAGAAGGTTCCAACAG GTTTATGTGGCTGAACCTAGTGTGGTTGACACCATTAGTATTCTTCGTGGGATAAAGGAGCGTTATGAAGGACATCACGGTGTTCGGATTCAGGATCGTG CTCTGGTTGTTGCTGCTCAATTGTCTAGTCGCTACATTACTGGACGTCATCTTCCTGATAAGGCAATTGATTTAGTTGATGAGGCTTGTGCGAATGTTCG GGTTCAGCTTGATAGCCAGCCCGAGGAAATTGATAAACTTGAAAGAAAGAGGACGCACCTTGAAGTGGAGCTTCATGCTTTGGAGAAAGAGAAGGACAAA GCTAGCAAAGCTCGTCTTGTCGAAGTAAAGAAGGAACTTGATGACTTAAGAGACAGACTACAACCTTTGATGATGAAGTACAGAAAAGAGAAGGAGAGGG TTGATGAGATTCGAAAGCTTAAACAGAAAAGAGAGGAGCTTCTCTTTGCTCTGCAAGAGGCTGAGAGAAGATATGATCTAGCTAGAGCTGCAGACTTGCG ATATGGTGCGATTCAGGAGTTGGAAACTGCAATCCAACAACTTGAAGGGAGCACTGATGAGAACTTAATGCTGACAGAAACTGTAGGACCAGAGCAGATA GCAGAGGTCGTAAGCCGCTGGACCGGGATACCGGTCACAAGGCTTGGCCAAAATGAGAAAGAAAGGCTCATTGGACTTGGTGACAGATTGCACCTTAGAG TTGTTGGACAAGACCAAGCAGTTAATGCTGTTGCTGAAGCTGTATTGAGATCAAGAGCTGGGCTAGGAAGGCCACAACAACCAACTGGTTCATTCTTGTT CTTAGGTCCAACTGGTGTTGGTAAGACTGAACTTGCTAAGGCTCTTGCCGAGCAGCTTTTCGATGATGAAAATCAGTTGGTGAGAATTGACATGTCCGAA TACATGGAGCAGCATTCAGTTTCAAGATTGATCGGTGCCCCACCAGGGTATGTTGGACATGAGGAAGGAGGTCAATTAACTGAAGCTGTAAGGAGAAGGC CTTACAGTGTGGTACTTTTTGATGAAGTGGAAAAGGCACATACATCAGTGTTCAACACTCTTCTTCAAGTATTAGATGATGGGCGGTTAACGGATGGCCA AGGCCGCACCGTAGACTTTAGAAACACCGTCATCGTCATGACTTCAAATCTTGGAGCAGAACACCTCCTGACTGGACTTTCAGGAAAATGTACCATGCAA GTTGCGCGTGATAAAGTAATGCAAGAGGTAAGAAGGCATTTTAGGCCAGAATTGTTGAATCGGCTTGATGAAATTGTGGTGTTTGATCCTCTTTCACATG AGCAACTGAGGAAGGTTGCAAGGCTGCAAATGAAGGATGTTGCTAGTCGTCTTGCTGAGAGAGGAATTGCCTTGGCAGTCACAGATGCAGCATTGGACTA TATACTAGCTGAGAGCTATGATCCTGTTTATGGTGCTAGACCAATAAGGAGGTGGCTTGAGAGGAAGGTGGTGACAGAGTTATCTAGAATGCTTGTAAGG GAAGAAATTGATGAGAATTCAACAGTTTACATAGATTCTGGGGCTAAGGGGAATGAGTTGGTGTACCATGTAGAAAAGAATGGAGGGGTTGTTAATCCTG CAACAGGCCAGAAGTCAGAGATATTGATTCAGATACCAAATGGACCAACAAAAACTGATGCTGCTCAAGCAGTCAAGAAGATGAAGATTGAGGAAATTGA TGGTGATGAAGAAATGGAAGAGTGAAGAATCTTATGATGTGGACCAGAAAATTCTAAGTTGTTTCTGTTCCTCCTTAAAAGTCCTCTTTTTCTGTCTAAT TTTGTAAATAGTCTTCCCAATAGGTGAGGTTGAAAAAGGAAAAAATTGTTGTACTAACAGCTATTTGTCTCATCAACAATTCATTGGATTTGGAAATCCA ATAGTTTACATTTATCACTAATTTAAATTGTTAGATTTTTCTAAAATTGATGATTATGATGAATAAATCTTTTAAACTTACTATTGGAATAATTTCATCT ATCAGTGTAATTTTGAATGAGAAAAACTAATAACATATTTCGTCAAGGCTATGAAAG
• Tissue: flowers
• Gene name: LI_gene_79648;
• Additional information: details;

Expression of Ll_transcript_33816

FPKM

• FPAB: 1.8
• FPNAB: 3.3
• LF1: 1.4
• LF2: 1.2
• LF3: 1
• LF4: 1
• UF1: 2.8
• UF2: 1.3
• UF3: 0.8
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_33816

• Blastp: Chaperone protein ClpB1 from Arabidopsis with 86.32% of identity
• Blastx: Chaperone protein ClpB1 from Arabidopsis with 86.38% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT1G74310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451648.1)
• Pfam: Clp amino terminal domain, pathogenicity island component (PF02861.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;