| Id Trinity | FTRINITY_DN58761_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_36215 |
| Sequence | CTCGAACAAAAAAAATAGGATATGAATAAATGCATGTTAGATTGAAAGTCCGAAAGAGCGACCTAAGCAAAAGTTTGGGCAATGAAAAAGACAATTATCT TGAAAGTCTACTATTATTGGGGTAAGCCAAAATCCTCCATATCTATACACATCAGGTTGGAATTGTAGAAGTTTTGAGCCTAGTGAGATGATATAAGAAG TTCTTGGGAGAATTAAACATGGCTAGCATGATGGTCCAATTATCCGCTTGCGTCGGAGATCAATTGGTGAATGAACAATTACTTTATACCCGGGAAAAAT AGCATTGGTGACAACAAAGCACTTGGTATTGATGGCTACAGTTCTCACTTCTTTAAAGTTGTCTGGGATGTAGTCAAGGTAGATATTTTGAAGGCTGTAA ATGAATTCTTTGAGGAGGAGAGACTACATCCAACTATCAATTGCACTCTAGTGACTATGCTACCAAAACACAATGCAAGTACAATGAAGGACATGAGATC AATATATTGCTGAACTACAATTTATAAAATTATATCCAAGATTCTCACAACAAGGCTAGGTGAAGTTATAGAGCATGTGGTTGATGATAGTCAATCTGCA TTTGTCCCTGTAGAGTCATTCATGATTATATTATCCCAGCCCGGGAACTAGTAAGAGGCTATGGAAGAAAGGTAATATCCCCTAGGTGCATGATCCAAAT GGACATCCAAAAAGCCTATGACGCACTAGAATGGGACTCTCTTAAGAGTATCATGATTAAGCTTAGTTTCCCCCGCAGGTTTATTAGATGGACCATGTTG TGTGTAAGTATTGGGTCTTATACATATTCAGTGAATGACACCCCCTCTAGTGTGCTCCAAGCCAAGAGAGGTTTAAGACAAGGAAATCCCATCTCACCCC TCCTCTTTGTCCTAGTTATGAAGTACTTGCATAGAGTTGTGCAAGAGCTGAAATATGGTCACAAGACTCACAACTACAACTTCCATCCTAAATGTGAAAA AATGGGTATTACAAACTTATGTTTTGCTGATGACCTCCTCCTATTTTGCAGGGGAGACCATAAATCAGTTCAACCGATGATGGAAATATTTAAAATGTTC TCTGAAAGTACAGGTCTAAAGGCTAGAACAACTAAATGCAAAGTCTACTTTGGTGGTGTGGACATGAACACCCAAAAGAGCATACAACAGACCACTGGGT TCAGTAAAGGATGCTTACCTTTCAAGTACCTTGGAGTCCCCCTGGACAGCAAGAAGTTAACAGTGAATCTATGCACTCCTTTGATTGACAAAATAACCAA TAGATTGAAACATTGGAGCACTAGACTGTTGAGTTATGCAGGAAGGCTTCAACTTATTAGAAGTGTTCTTTTTTTCTATCACTAACTATTGGATGCAGGT GTTTCCACCAGTGGTGTTGAATGGCGGCCATGGCGGCGCCATGGCGGATGGCGGTGGCGTTTTTTAGGCTACCGCCATTAGCCATTTCATAATATCCGCC AAATGGCAGCGTCCGCCTTTTGCTAAAAGAAGCCGCCATGGCGGCAATGGCGGACGTTCTTAGTTTCTGGCTGTTTTTTTTAAAAAAAAGGGGCTTTATT TGGCCCTATGGGTTAAAAATAGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79857; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_36215
| Blastp | LINE-1 reverse transcriptase homolog from Nycticebus with 23.89% of identity |
|---|---|
| Blastx | LINE-1 reverse transcriptase homolog from Nycticebus with 23.89% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_006584238.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |