| Id Trinity | FTRINITY_DN58762_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_35845 |
| Sequence | TTTTCATGGAGGTGAAAATTGGAGTTATAAATGGCACCAGATATTAATAGTTTTCACAAAAAAAAAATAATAAAAAGAAAATACACTTGACGAAACGAGA GTAGATCCCATCATTCACACAACAAAATAGTTAACTCTAATCAAATCTGAGAGAGGTTCTATTCATCCTCTATTTCAATTCTTCCTTTTCATTATTCTCT TTATATTATTTTCGTTTTCCGATGCAGTGTTTTTTGTTTCGTTTTTACGTAGAATAATCACAACAATAAGATGCTGACGAAATTTGAGACGAAGAGTAAC AGAGTGAAGGGTCTTAGTTTCCACACTAAGAGGCCATGGATCCTTGCGAGTCTTCACAGCGGTGTTATTCAGTTATGGGATTATCGAATGGGTACTCTCA TTGATAGATTCGATGAACATGATGGTCCTGTTAGAGGTGTTCATTTTCATAATTCTCAACCCCTTTTTGTATCTGGAGGGGATGATTACAAGATTAAGGT TTGGAACTACAAGCTGCATAGGTGCTTGTTTACTCTTCTTGGACACCTTGATTATATTCGTACGGTGCAATTTCACCATGAAAGCCCATGGATCGTTAGT GCCAGTGACGATCAGACCATCCGCATCTGGAACTGGCAGTCACGTACTTGTGTATCTGTTTTAACTGGCCACAACCACTATGTTATGTCTGCTTTGTTCC ATCCAAAAGAGGATCTTGTTGTGTCAGCCTCTCTGGATCAGACCGTCCGTGTTTGGGATATTAGTTCTCTCAAGCGGAAGAATGCTTCTCCTGCAGATGA CCTGCTACGATTAAGTCAGATGAATACTGACCTTTTTGGTGGTGTTGATGCAGTTGTTAAATATGTGTTGGAAGGTCATGACCGGGGAGTCAATTGGGCT TCTTTCCATCCTACACTGCCTCTCATTGTCTCTGGAGCTGATGATCGACAAGTGAAATTGTGGAGGATGAATGACACAAAGGCTTGGGAAGTTGACACAT TGAGAGGGCACATGAATAATGTTTCATGTGTTATGTTCCATGCAAAACAGGATATTATTGTGTCAAATTCCGAAGATAAAAGTATTCGAGTATGGGATGC AACAAAGAGGACTGGAATTCAAACATTCCGCCGAGAGCATGATCGGTTTTGGATTCTTGTAGCACATCCTGAATTGAATCTTTTGGCAGCTGGTCATGAC AGTGGCATGATTGTTTTTAAGCTGGAGAGAGAAAGGCCTGCATTCACAGTTAGTGATGATTCATTGTTCTACACAAAAGACCGATTCTTGCGTTTCTATG AATTTTCAACACAAAGAGAGACACAAGTACTTCCAATTCGTAGACCTGGCTCGTTAAGCCTGAATCAAAGTCCAAAGACACTTTCCTACAGCCCTACTGA AAATGCATTTCTTCTATGTTCTGATGCAGACGGTGGATCTTATGAATTGTATATCATATCCAAGGATAGCTACGGTAGGGGTGATGTGCAAGATGCTAAA AAAGGTCCTGGAGGATCAGCAGTGTTTGTGGCTCGGAATAGGTTTGCTGTGCTTGACAAGAGCACCAATCAAGTCCTTCTGAAAAATTTGAAGAATGAGA TTGTTAAGAAGAGTGCCCTCCCAATTGCTACTGACTCTATATTCTATGCAGGAACAGGCAACTTGCTTTGTAGGTCAGAGGATAGGGTTGTTATATTTGA CCTCCAACAAAGGCTCGTTGTTGGTGATCTTCAGACTCCTTTTATCAAATATGTTGTATGGTCTAATGACATGGAAAGTGTTGCTTTGCTGAGCAAGCAT GCCATCATAATTGCTAGCAAGAAACTCGTACACCAATGTACTCTCCACGAGACAATACGGGTAAAAAGTGGAGGCTGGGATGACAATGGTGTTTTCATTT ATACAACATTAAATCACATCAAATACTGCCTTCCCAATGGAGATTGTGGGATAATAAAAACACTTGATGCAACAATTTATATCACAAAGGTTTCTGGAAA CACAATCTTCTGCTTGGATCGGGATGGGAAAAGCAAATCTATAGTTATTGATGCAACTGAATATATATTTAAGCTTTCCCTGTTGAAGAAAAGATATGAC CATGTGATGAACATGATCAGGAATTCACAGCTTTGTGGGCAGGCAATGATTGCGTATCTACAACAGAAGGGCTTTCCTGAGGTTGCCCTTCACTTTGTGA AAGATGAGAGAATACGGTTCAATTTAGCTTTGGAGAGTGGAAACATTCAAACTGCAGTTGCATCAGCTACAGCAATTGATGAGAAAGATCACTGGTATCG CTTAGGGGTTGAGGCTCTTCGCCAAGGAAATGCTGGTATTGTGGAGTATGCATACCAGAGGACAAAGAATTTTGAGAGGTTGTCTTTCCTTTACCTTGTA ACTGGTAACATGGAGAAACTTTCGAAGATGTTAAAAATTGCTGAAGTCAAGAATGATGTGATGGGTCAGTTTCACAATGCCTTGTACATGGGTGATGTTC GAGAACGTATTAAGATCTTGGAGAATGTAGGCCATTTGCCACTTGCTTACATCACTGCATCAGTCCACGGGCTACACGATGTTGCTGAACGACTTGCAGC TGAGTTGGGGGATAATGTCCCATCTTTGCCTGAGGGAAAAGTACCATCGCTCCTGATGCCACCATCACCTGTGATGTGTGGTAGTGATTGGCCCCTTCTC AGGGTCATGAAGGGCATGTTCGATGGTGTGTTTGACAATACAGGTGCAGGTTCTGCTGATGAAGAATATGAGGCTGCTGATGGTGATTGGGGCGAAGAGC TTGATGTAGTTGATGTGGATGGCTTACAAAATGGAGATGTTACTGAGATTCTGGATGATGGAGAAGTGGCTGAAGAAAACGATGAAGAGGGTGGATGGGA GATGGAGGATTTAGAGCTGCCCCCAGAAGCTGAGACCCCAAAAGTTTCTATCAGTTCACGTTCTTCAGTTTTTGTGCCTCCAACACCTGGCATTCCGGTT AGCCAGATATGGATTCAGAGGTCATCACTTGCAGCTGATCATGCAGCCGCTGGCAATTTTGATACTGCAATGCGGTTACTTAACCGGCAACTTGGGATCA GAAACTTTGCCCCCTTGAAATCCATGTTTCTTGACCTTAACACTGGAAGTCATTCCTATCTGCTTGCATTTTCGTTTGCTCCAGAAATAACACTTGCAGT TGAAAGAGGATGGACCGAGTCATCTAGTCCAAACGTGAGAAGCTCACCTGCACTTCCGTTCAAATTGTCTCAGTTGGATGAAAAGCTTAAAGCTGGTTAC AAGTTAACTACTGCTGGGAAATTCACTGAAGCTCTTCGGACATTTGTCAATATTCTTCATACAATTCCATTGACTGTTGTTGACTCAAGGAGGGAAGTGG ATGAAGTGAAGGAATTGATTATCATAGTCAAAGAGTATGTTTTAGGTCTCCAGATTGAGTTGCAGAGGAGGGAAATCAAGGACAACCCTGCACGGCAACA GGAGCTTGCAGCATATTTCACTCATTGCAACCTTCAACTACCACACTTGAGGTTAGCTCTGCTCAATGCAATGGTTGTATGCTTCAAGGAAAAGAACCTC GCCACAGCTTATAATTTCGCCAGGAGGCTACTTGAGACAAACCCTACCATTGAAATCCAAGTAAAGAGAGCGAGGCAAGTGGTGGCAGCTGCAGAAAAGA ATATGAATGATGCCACGCAGTTGAACTATGATTACCGAAACCCATTTGTGATTTGTGGTGCAACATATGTCCCAATCTATCGAGGACAGAAGGATGTCTC TTGCCCATATTGTACTTCTCGATTCGTGCCAGGCCATGAAGGGCAACTATGTACTGTGTGTGATCTTGCAGTGGTAGGGGCAGATGCTTCTGGGTTGCTC TGTTCACCTTCCCAGTTACGTTGATTGAGCTGTGGACCAGGAGTTGATTGAGCGGTGGACCAGGAGTTTTCTCGAACTTTGTTTCAGATCAATTTTATGC AGCAGATGGAACATTATTGATCCATTAATATTTCATGGTAACTAGAAAATTTTGCTTTTCCTTTTATTTTGTCGAAAATGATTTTCAATGTAATAAATAA ACTTTATGTTTTAAGGGTGTTTGTTTCATGCAAAGAAAGCAAGAGGGTGTAGTTATTAAGATCAAATGTTTGTTTTTATGGTGTGCATACTTATGACTTT GGCACATCTTGTTTGGCAATGCATTTCCTTATAGGTTCTATGTCAGTAAGTTATTTTGTGTAATCTTTCATGTTGCATTATGATTAGAAATGGTTACACT TGAGCAGTATCATCAAATCATGGTTAGTCATTTAGCTGGACAAGCTGCAGTGGTTTGAATTATGCTGGTGGAGCTTTTTCCCTCAACTGCACCATACCCT GGCTAAGGTTATTTGCATCTGCATTCCTCAAACTCCACTAAGTCGGAGCCTTTTCCAACTTCTCCGAGGACTTTACTGGTGTTATTTTGGCAGGGAACCT ATTATTAGTCTGTTTTTATTAATCACAAAAACTCTTCCATGTCATTTAGTTCTGGTATGAGTCTTTACAACTTTAAAGCATTTAGTTTATTCATTATGAT GATAAATTAAGTGCTAATGTATCATATCATTATTGACCATGCCAATAACTTTTTAAGATATGTAATTGGTGTTTGTTTTTTCTACTATTAAAAGTATCCC CTCACTTTTTTTAATAAAAAGTTAATCTCTTTCGAGGTTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79866; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_35845
| Blastp | Coatomer subunit alpha-1 from Arabidopsis with 82.69% of identity |
|---|---|
| Blastx | Coatomer subunit alpha-1 from Arabidopsis with 82.2% of identity |
| Eggnog | Coatomer protein complex subunit alpha(ENOG410XPZS) |
| Kegg | Link to kegg annotations (AT1G62020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449811.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |