| Id Trinity | FTRINITY_DN58762_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_35848 |
| Sequence | TTTTCATGGAGGTGAAAATTGGAGTTATAAATGGCACCAGATATTAATAGTTTTCACAAAAAAAAAATAATAAAAAGAAAATACACTTGACGAAACGAGA GTAGATCCCATCATTCACACAACAAAATAGTTAACTCTAATCAAATCTGAGAGAGGTTCTATTCATCCTCTATTTCAATTCTTCCTTTTCATTATTCTCT TTATATTATTTTCGTTTTCCGATGCAGTGTTTTTTGTTTCGTTTTTACGTAGAATAATCACAACAATAAGATGCTGACGAAATTTGAGACGAAGAGTAAC AGAGTGAAGGGTCTTAGTTTCCACACTAAGAGGCCATGGATCCTTGCGAGTCTTCACAGCGGTGTTATTCAGTTATGGGATTATCGAATGGGTACTCTCA TTGATAGATTCGATGAACATGATGGTCCTGTTAGAGGTGTTCATTTTCATAATTCTCAACCCCTTTTTGTATCTGGAGGGGATGATTACAAGATTAAGGT TTGGAACTACAAGCTGCATAGGTGCTTGTTTACTCTTCTTGGACACCTTGATTATATTCGTACGGTGCAATTTCACCATGAAAGCCCATGGATCGTTAGT GCCAGTGACGATCAGACCATCCGCATCTGGAACTGGCAGTCACGTACTTGTGTATCTGTTTTAACTGGCCACAACCACTATGTTATGTCTGCTTTGTTCC ATCCAAAAGAGGATCTTGTTGTGTCAGCCTCTCTGGATCAGACCGTCCGTGTTTGGGATATTAGTTCTCTCAAGCGGAAGAATGCTTCTCCTGCAGATGA CCTGCTACGATTAAGTCAGATGAATACTGACCTTTTTGGTGGTGTTGATGCAGTTGTTAAATATGTGTTGGAAGGTCATGACCGGGGAGTCAATTGGGCT TCTTTCCATCCTACACTGCCTCTCATTGTCTCTGGAGCTGATGATCGACAAGTGAAATTGTGGAGGATGAATGACACAAAGGCTTGGGAAGTTGACACAT TGAGAGGGCACATGAATAATGTTTCATGTGTTATGTTCCATGCAAAACAGGATATTATTGTGTCAAATTCCGAAGATAAAAGTATTCGAGTATGGGATGC AACAAAGAGGACTGGAATTCAAACATTCCGCCGAGAGCATGATCGGTTTTGGATTCTTGTAGCACATCCTGAATTGAATCTTTTGGCAGCTGGTCATGAC AGTGGCATGATTGTTTTTAAGCTGGAGAGAGAAAGGCCCGCATTTGCTGTTACTGCTGATTCCTTATTATACATAAAGGACCGATTTCTGCGTTCCTATG AATTTTCAACCCAAAGAGAGACACAGCTACTTCCAATTCGACGACCTGGTTCTCTAACCTTGAATCAGAGTCCAAAGACTCTTTCCTACAGCCCAACTGA AAATGCAGTTCTTCTCTGTTCAGATGTAGACGGCGGATCTTATGAGTTGTATTCTCTATCCAAGGACAGCTATGGTAGGGGTGATGTCCAAGATGCAAAG AAAGGTCTTGGAGGATCAGCAGTCTTTGTGGCTCGGAATAGGTTTGCCGTGCTTGACAAAAGCAACAACCAAATCCTTTTAAAAAATCTGAAGAATGAGC TTGTTAAAAAGAGTGCCCTTCCGATTGCTACTGATGCTATATTCCCTGCAGGAACAGGCAACTTGATTTGTAGGTCGGAAGATAAGGTTGTTGTATTTGA TCTTCAGCAGAGGATTGTTCTTGGTGAACTTCAGACCCCATTCATCAAGTATGTTGTCTGGTCTAATGACATGGAAAGCGTTGCTTTGCTCAGCAAACAT GCCATAATCATTGCTAACAAGAAGCTTCTGCACCAATGCACTCTCCATGAGACAATCCGCGTAAAAAGTGGAGCCTGGGACGACAATGGTGTTTTTATCT ACACGACATTGAATCACATTAAATACTGTCTTCCAAATGGAGATAGTGGGATAATAAAAACACTGGATGTCCCGATTTATATGACAAAGGTGTCTGGAAA TACCATCTTTTGCTTGGACCGGGATGGGAAAAACAGGGCCATAGTTATTGATGCAACTGAGTATATATTTAAGCTTTCCTTGTTGAGGAAAAGATTTGAC CATGTTATGAACATGATAAAGAATTCACAGCTTTGTGGGCAGGCTATGATTGCTTATCTCCAGCAGAAAGGATTTCCTGAGGTTGCCCTCCATTTTGTGA ATGATGAGAAAATTCGATTCGATCTGGCTTTAGAGAGTGGAAACATTCAAATTGCAGTTGCATCCGCTACAGCAATTGATGAGAAAGATCACTGGTACCG CTTAGGGGTTGAGGCTCTTCGTCAAGGCAACGCTGGTATAGTTGAGTATGCATATCAGAGGACAAAAAATTTTGAGAGACTGTCTTTTCTTTATCTCGTC ACTGGAAACTTGGAGAAACTTTCGAAGATGTTAAGGATTGCTGAAGTGAAGAATGATGTGATGGGTCAGTTTCACAATGCCTTGTATATGGGTGATGTCA GAGAACGTGTTAAAATCTTGGAGAGTGTGGGTCATTTGCCCCTTGCTTACATCACTGCATCAGTCCACGGGCTTCATGATGTTGCTGAAAGGCTTGCAGC CGAACTTGGGGACAACGTTCCTTCTTTGCCTGAGGGGAAAGCACCATCTCTTCTAATACCGCCTTCACCAGTCATGAGTGGTGGTGATTGGCCTCTTCTC AGGGTCATGCGAGGCATATTTGATGGTGGGTTTGAGAATAAGGGCCGGGGTGTTGCTGACGAAGAGTATGAAGCAGCTGATGCTGATTGGGGTGAGGAGC TTGACATGGTTGATGCGGATGATTTACAAAACGGAGAAGTGGCTGCAGTTTTGGATGATGGAGAAGTGGCTGAAGAAAATGAAGAAGGTGGATGGGAGAT GGAAGATTTGGAGCTACCCCCTGAAGTTGACACCCCAAAAGCTTCTATCAATACCCGATCTTCTGTTTTTGTGGCCCCGACACCTGGCGTGCCAGTAAGC CAGATATGGGTTCAGAAATCATCTCTTGCAGCAGATCATGCGGCTGCTGGCAACTTTGATACCGCAATGCGGTTACTGAACCGTCAACTTGGGATAAAAA ACTTTGCTCCCTTAAGATCCTCGTTTATTGATCTCCATAATGGCAGTCATTCCTATCTGCGTGCATTATGGTCTGCTCCAGTAATATCTTTTGCTGTCGA AAGAGGTTGGACTGAGTCATCGAGTGCAAATGTAAGAGGCCCACCAGCACTGCCTTTCAAATTGTCTCAGTTGGATGAAAAGCTCAAAGCTGGTTATAAG TCAACAACTGCTGGGAAATTTACCGATGCTCTTCGGACATTCATCAGCATTCTTCATACTATTCCCTTGGTTGTAGTTGAGTCAAGGAGGGAAGTGGATG AAGTGAAGGAACTGATTATCATAGTCAAAGAATATGTTTTGGGTCTGCAGATGGAGTTAAAGAGAAGGGAAATTAAGGACAACCCAGCACGGCAACAGGA ACTTGCAGCATATTTTACCCACTGCAACCTTCAGCCACCACACTTGAGGCTAGCTCTGCTGAATGCAATGAGTGTCTCTTACAAGGCAAAGAATCTTGCC ACAGCCTCTAACTTTGCCAGGAGGCTACTTGAGACCAATCCTACCATTGAAAACCAAGCTAAGACCGCAAGGCAAGTGCTGGCAGCTGCAGAGAGGAATA TGAATGATGCCACAGAGTTGAACTACGATTTCAGAAACCCATTTGTGATATGCGGCGCAACCTATGTGCCGATCTATCGAGGACAAAAGGACGTCTCTTG CCCATACTGTACTTCCCGTTTTGTTCCTAGCCAGGAGGGACAGCTTTGTACCGTGTGTGATCTTGCGGTCGTTGGTGCAGATGCTTCCGGATTGGTATGT TCACCTTCTCAGATACGTTGATTGTGCTCGTGGGCCAGAAACAGTTTTTTCAAGTCATTTCAGGTAAATTTTCAGCAGCAACACCGAGACTGCCATTGAT CTATTAAAATTTCCTGCTTGAACTTATTAGATTTAATCAGGAAGAATTGATGTTTCTGTTTTTTTGTTTCTCTCTGTACTTTTTACCTTTTACTTCTCTG AAGAATTTTTATGATGTGATAAATTTACTTCATATTTTAGGGGTGCCATTAGTTTTTATAGACAAGAAAGTGAGAGGGTGTACTTGTATTAGATGATGGC TATAAACTGCAACACTTGCAATTGCAGTTGGTTTATTTGGCAAAATATAATGTCTGTGTTTAGTTGGGGTCCACTCCCCTTGGTTGTAAAAGGGAGTAAT ACTAAACTAAGGTAACTAACTCTTTGTTTTTTCCTGTGTGTTTGTTACTGTGTGCAACTTCATGTTTCCTACTGTATCTGTGAACACCCGCAAAAAATAC CCGCAATGGGTCGAGTCTGAGTCATGTTTTTGGATCCGTGGGTAATTAAGACCCAAAATTTTAAGATCCGTTGTTGGATGAGTTTGAATCCGGGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79866; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_35848
| Blastp | Coatomer subunit alpha-1 from Arabidopsis with 82.61% of identity |
|---|---|
| Blastx | Coatomer subunit alpha-2 from Arabidopsis with 82.18% of identity |
| Eggnog | Coatomer protein complex subunit alpha(ENOG410XPZS) |
| Kegg | Link to kegg annotations (AT1G62020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437248.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |