| Id Trinity | FTRINITY_DN58762_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_35839 |
| Sequence | TACATGGCACAACTTAAGAGAGTGTTGTGAAAATAAATGATGTAATAATTTTGTTGAATTGAGCGAGAATTGCGTAATTTTACATACATGGCACAACTTA AGAGAGTTTTGTGAAAATAAATAATACACAGATGTGGAAGCACTACCAGATCTGTTATATTGGATCTTCACCCTTTTGCATCCAATTTTCTTCACTCTAT TCAGATCTATAACTTTCTTTCTCTATTTCCATTTCCATTTCCATTCTCATTTCAACAACTTTCACTTTTTCAATTTCAATAATAAACATGTTGACAAAAT TTGAGACAAAGAGTAACAGAGTGAAGGGTCTGAGTTTCCATATCAAGAGGCCATGGATCTTAGCGAGTCTTCATAGTGGTGTTATTCAGTTATGGGATTA TCGAATGGGTACTCTCATTGATCGATTTGATGAACATGATGGTCCTGTTAGAGGGGTTCATTTTCATAATTCTCAACCTCTTTTTGTTTCTGGAGGGGAT GATTACAAGATTAAGGTTTGGAACTACAAGACGCACAGGTGTTTGTTTACTCTTCTAGGACACCTTGATTATATTCGTACGGTGCAATTTCATCATGAGA GCCCATGGATAGTGAGTGCCAGTGACGATCAGACCATTCGCATCTGGAACTGGCAGTCACGGACTTGCATATCTGTTTTAACTGGCCACAATCATTATGT TATGTGTGCCTTGTTCCACCCGAAAGAGGACCTTGTTGTGTCTGCCTCTCTGGATCAGACTGTTCGTGTTTGGGATATTAGTTCTCTTAAGAGGAAGAAT GCATCTCCTGCAGATGACATACTGCGATTGAGTCAGATGAATACAGACCTTTTTGGTGGTGTTGATGCTGTTGTTAAGTATGTCTTGGAAGGTCATGACC GAGGAGTCAATTGGGCTTCTTTCCATCCTACACTGCCTCTCATTGTCTCAGGAGCTGATGACCGACAAGTGAAATTGTGGAGGATGAATGACACAAAGGC GTGGGAAGTGGACACATTGAGAGGGCACATGAATAATGTTTCATGTGTTATGTTCCATGCAAAACAGGATATTATTGTGTCAAACTCTGAAGATAAAAGT ATTCGAGTATGGGATGCAACAAAGAGGACTGGAATTCAAACATTCCGCCGAGAGCATGATCGGTTTTGGATTCTTGTAGCACATCCTGAATTGAATCTTT TGGCAGCTGGTCATGACAGTGGCATGATTGTTTTTAAGCTGGAGAGAGAAAGGCCCGCATTTGCTGTTACTGCTGATTCCTTATTATACATAAAGGACCG ATTTCTGCGTTCCTATGAATTTTCAACCCAAAGAGAGACACAGCTACTTCCAATTCGACGACCTGGTTCTCTAACCTTGAATCAGAGTCCAAAGACTCTT TCCTACAGCCCAACTGAAAATGCAGTTCTTCTCTGTTCAGATGTAGACGGCGGATCTTATGAGTTGTATTCTCTATCCAAGGACAGCTATGGTAGGGGTG ATGTCCAAGATGCAAAGAAAGGTCTTGGAGGATCAGCAGTCTTTGTGGCTCGGAATAGGTTTGCCGTGCTTGACAAAAGCAACAACCAAATCCTTTTAAA AAATCTGAAGAATGAGCTTGTTAAAAAGAGTGCCCTTCCGATTGCTACTGATGCTATATTCCCTGCAGGAACAGGCAACTTGATTTGTAGGTCGGAAGAT AAGGTTGTTGTATTTGATCTTCAGCAGAGGATTGTTCTTGGTGAACTTCAGACCCCATTCATCAAGTATGTTGTCTGGTCTAATGACATGGAAAGCGTTG CTTTGCTCAGCAAACATGCCATAATCATTGCTAACAAGAAGCTTCTGCACCAATGCACTCTCCATGAGACAATCCGCGTAAAAAGTGGAGCCTGGGACGA CAATGGTGTTTTTATCTACACGACATTGAATCACATTAAATACTGTCTTCCAAATGGAGATAGTGGGATAATAAAAACACTGGATGTCCCGATTTATATG ACAAAGGTGTCTGGAAATACCATCTTTTGCTTGGACCGGGATGGGAAAAACAGGGCCATAGTTATTGATGCAACTGAGTATATATTTAAGCTTTCCTTGT TGAGGAAAAGATTTGACCATGTTATGAACATGATAAAGAATTCACAGCTTTGTGGGCAGGCTATGATTGCTTATCTCCAGCAGAAAGGATTTCCTGAGGT TGCCCTCCATTTTGTGAATGATGAGAAAATTCGATTCGATCTGGCTTTAGAGAGTGGAAACATTCAAATTGCAGTTGCATCCGCTACAGCAATTGATGAG AAAGATCACTGGTACCGCTTAGGGGTTGAGGCTCTTCGTCAAGGCAACGCTGGTATAGTTGAGTATGCATATCAGAGGACAAAAAATTTTGAGAGACTGT CTTTTCTTTATCTCGTCACTGGAAACTTGGAGAAACTTTCGAAGATGTTAAGGATTGCTGAAGTGAAGAATGATGTGATGGGTCAGTTTCACAATGCCTT GTATATGGGTGATGTCAGAGAACGTGTTAAAATCTTGGAGAGTGTGGGTCATTTGCCCCTTGCTTACATCACTGCATCAGTCCACGGGCTTCATGATGTT GCTGAAAGGCTTGCAGCCGAACTTGGGGACAACGTTCCTTCTTTGCCTGAGGGGAAAGCACCATCTCTTCTAATACCGCCTTCACCAGTCATGAGTGGTG GTGATTGGCCTCTTCTCAGGGTCATGCGAGGCATATTTGATGGTGGGTTTGAGAATAAGGGCCGGGGTGTTGCTGACGAAGAGTATGAAGCAGCTGATGC TGATTGGGGTGAGGAGCTTGACATGGTTGATGCGGATGATTTACAAAACGGAGAAGTGGCTGCAGTTTTGGATGATGGAGAAGTGGCTGAAGAAAATGAA GAAGGTGGATGGGAGATGGAAGATTTGGAGCTACCCCCTGAAGTTGACACCCCAAAAGCTTCTATCAATACCCGATCTTCTGTTTTTGTGGCCCCGACAC CTGGCGTGCCAGTAAGCCAGATATGGGTTCAGAAATCATCTCTTGCAGCAGATCATGCGGCTGCTGGCAACTTTGATACCGCAATGCGGTTACTGAACCG TCAACTTGGGATAAAAAACTTTGCTCCCTTAAGATCCTCGTTTATTGATCTCCATAATGGCAGTCATTCCTATCTGCGTGCATTATGGTCTGCTCCAGTA ATATCTTTTGCTGTCGAAAGAGGTTGGACTGAGTCATCGAGTGCAAATGTAAGAGGCCCACCAGCACTGCCTTTCAAATTGTCTCAGTTGGATGAAAAGC TCAAAGCTGGTTATAAGTCAACAACTGCTGGGAAATTTACCGATGCTCTTCGGACATTCATCAGCATTCTTCATACTATTCCCTTGGTTGTAGTTGAGTC AAGGAGGGAAGTGGATGAAGTGAAGGAACTGATTATCATAGTCAAAGAATATGTTTTGGGTCTGCAGATGGAGTTAAAGAGAAGGGAAATTAAGGACAAC CCAGCACGGCAACAGGAACTTGCAGCATATTTTACCCACTGCAACCTTCAGCCACCACACTTGAGGCTAGCTCTGCTGAATGCAATGAGTGTCTCTTACA AGGCAAAGAATCTTGCCACAGCCTCTAACTTTGCCAGGAGGCTACTTGAGACCAATCCTACCATTGAAAACCAAGCTAAGACCGCAAGGCAAGTGCTGGC AGCTGCAGAGAGGAATATGAATGATGCCACAGAGTTGAACTACGATTTCAGAAACCCATTTGTGATATGCGGCGCAACCTATGTGCCGATCTATCGAGGA CAAAAGGACGTCTCTTGCCCATACTGTACTTCCCGTTTTGTTCCTAGCCAGGAGGGACAGCTTTGTACCGTGTGTGATCTTGCGGTCGTTGGTGCAGATG CTTCCGGATTGGTATGTTCACCTTCTCAGATACGTTGATTGTGCTCGTGGGCCAGAAACAGTTTTTTCAAGTCATTTCAGGTAAATTTTCAGCAGCAACA CCGAGACTGCCATTGATCTATTAAAATTTCCTGCTTGAACTTATTAGATTTAATCAGGAAGAATTGATGTTTCTGTTTTTTTGTTTCTCTCTGTACTTTT TACCTTTTACTTCTCTGAAGAATTTTTATGATGTGATAAATTTACTTCATATTTTAGGGGTGCCATTAGTTTTTATAGACAAGAAAGTGAGAGGGTGTAC TTGTATTAGATGATGGCTATAAACTGCAACACTTGCAATTGCAGTTGGTTTATTTGGCAAAATATAATGTCTGTGTTTAGTTGGGGTCCACTCCCCTTGG TTGTAAAAGGGAGTAATACTAAACTAAGGTAACTAACTCTTTGTTTTTTCCTGTGTGTTTGTTACTGTGTGCAACTTCATGTTTCCTACTGTATCTGTGA ACACCCGCAAAAAATACCCGCAATGGGTCGAGTCTGAGTCATGTTTTTGGATCCGTGGGTAATTAAGACCCAAAATTTTAAGATCCGTTGTTGGATGAGT TTGAATCCGGGAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_79866; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_35839
| Blastp | Coatomer subunit alpha-1 from Arabidopsis with 82.69% of identity |
|---|---|
| Blastx | Coatomer subunit alpha-2 from Arabidopsis with 82.35% of identity |
| Eggnog | Coatomer protein complex subunit alpha(ENOG410XPZS) |
| Kegg | Link to kegg annotations (AT1G62020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437248.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |