Ll_transcript_35840

• Id Trinity: FTRINITY_DN58762_c1_g1_i6
• Name Transcript: Ll_transcript_35840
• Sequence: TACATGGCACAACTTAAGAGAGTGTTGTGAAAATAAATGATGTAATAATTTTGTTGAATTGAGCGAGAATTGCGTAATTTTACATACATGGCACAACTTA AGAGAGTTTTGTGAAAATAAATAATACACAGATGTGGAAGCACTACCAGATCTGTTATATTGGATCTTCACCCTTTTGCATCCAATTTTCTTCACTCTAT TCAGATCTATAACTTTCTTTCTCTATTTCCATTTCCATTTCCATTCTCATTTCAACAACTTTCACTTTTTCAATTTCAATAATAAACATGTTGACAAAAT TTGAGACAAAGAGTAACAGAGTGAAGGGTCTGAGTTTCCATATCAAGAGGCCATGGATCTTAGCGAGTCTTCATAGTGGTGTTATTCAGTTATGGGATTA TCGAATGGGTACTCTCATTGATCGATTTGATGAACATGATGGTCCTGTTAGAGGGGTTCATTTTCATAATTCTCAACCTCTTTTTGTTTCTGGAGGGGAT GATTACAAGATTAAGGTTTGGAACTACAAGACGCACAGGTGTTTGTTTACTCTTCTAGGACACCTTGATTATATTCGTACGGTGCAATTTCATCATGAGA GCCCATGGATAGTGAGTGCCAGTGACGATCAGACCATTCGCATCTGGAACTGGCAGTCACGGACTTGCATATCTGTTTTAACTGGCCACAATCATTATGT TATGTGTGCCTTGTTCCACCCGAAAGAGGACCTTGTTGTGTCTGCCTCTCTGGATCAGACTGTTCGTGTTTGGGATATTAGTTCTCTTAAGAGGAAGAAT GCATCTCCTGCAGATGACATACTGCGATTGAGTCAGATGAATACAGACCTTTTTGGTGGTGTTGATGCTGTTGTTAAGTATGTCTTGGAAGGTCATGACC GAGGAGTCAATTGGGCTTCTTTCCATCCTACACTGCCTCTCATTGTCTCAGGAGCTGATGACCGACAAGTGAAATTGTGGAGGATGAATGACACAAAGGC GTGGGAAGTGGACACATTGAGAGGGCACATGAATAATGTTTCATGTGTTATGTTCCATGCAAAACAGGATATTATTGTGTCAAACTCTGAAGATAAAAGT ATTCGAGTATGGGATGCAACAAAGAGGACTGGAATTCAAACATTCCGCCGAGAGCATGATCGGTTTTGGATTCTTGTAGCACATCCTGAATTGAATCTTT TGGCAGCTGGTCATGACAGTGGCATGATTGTTTTTAAGCTGGAGAGAGAAAGGCCCGCATTTGCTGTTACTGCTGATTCCTTATTATACATAAAGGACCG ATTTCTGCGTTCCTATGAATTTTCAACCCAAAGAGAGACACAGCTACTTCCAATTCGACGACCTGGTTCTCTAACCTTGAATCAGAGTCCAAAGACTCTT TCCTACAGCCCAACTGAAAATGCAGTTCTTCTCTGTTCAGATGTAGACGGCGGATCTTATGAGTTGTATTCTCTATCCAAGGACAGCTATGGTAGGGGTG ATGTCCAAGATGCAAAGAAAGGTCTTGGAGGATCAGCAGTCTTTGTGGCTCGGAATAGGTTTGCCGTGCTTGACAAAAGCAACAACCAAATCCTTTTAAA AAATCTGAAGAATGAGCTTGTTAAAAAGAGTGCCCTTCCGATTGCTACTGATGCTATATTCCCTGCAGGAACAGGCAACTTGATTTGTAGGTCGGAAGAT AAGGTTGTTGTATTTGATCTTCAGCAGAGGATTGTTCTTGGTGAACTTCAGACCCCATTCATCAAGTATGTTGTCTGGTCTAATGACATGGAAAGCGTTG CTTTGCTCAGCAAACATGCCATAATCATTGCTAACAAGAAGCTTCTGCACCAATGCACTCTCCATGAGACAATCCGCGTAAAAAGTGGAGCCTGGGACGA CAATGGTGTTTTTATCTACACGACATTGAATCACATTAAATACTGTCTTCCAAATGGAGATAGTGGGATAATAAAAACACTGGATGTCCCGATTTATATG ACAAAGGTGTCTGGAAATACCATCTTTTGCTTGGACCGGGATGGGAAAAACAGGGCCATAGTTATTGATGCAACTGAGTATATATTTAAGCTTTCCTTGT TGAGGAAAAGATTTGACCATGTTATGAACATGATAAAGAATTCACAGCTTTGTGGGCAGGCTATGATTGCTTATCTCCAGCAGAAAGGATTTCCTGAGGT TGCCCTCCATTTTGTGAATGATGAGAAAATTCGATTCGATCTGGCTTTAGAGAGTGGAAACATTCAAATTGCAGTTGCATCAGCTACAACAATTGATGAG AAAGATCATTGGTATCGTTTAGGGGTTGAGGCTCTTCGCCAAGGAAATGCTGGTATAGTAGAGTATGCATACCAGAGGACAAAAAATTTTGAGAGGTTGT CTTTCCTTTACCTTGTAACTGGTAACATGGAGAAACTGTCGAAGATGTTAAAAATTGCTGAAGTCAAGAGTGATGTGATGGGCCAGTTCCATAATGCCTT GTACATGGGTGATGTTCGAGAACGTATTAAGATCTTGGAGAATGTAGGCCATTTGCCACTTGCTTACATCACTGCATCAGTCCACGGGCTACATGATGTT GCTGAACGACTTGCGGCTGAACTGGGAGATAATGTTCCATCATTGCCAGAGGGGAAAGTACCATCTCTCTTGATGCCACCGTCACCTGTGATGTGTGGTG GTGATTGGCCCCTTCTCAGGGTTATGAAAGGCATGTTTGATGGTGTATTTGATAATACAGGTGCAGATGCTGCTGGTGAGGAATATGAGGCTGCTGATGG TGATTGGGGTGAAGAGCTTGACATAGTTGATGCAGATGCCTTACAAAATGGAGATGTTACTGAGATTCTGGATGATGGAGAAGTAGCTGAAGAAAATGAT GAAGAGGGTGGATGGGAGATGGAGGATTTAGAGCTGCCCCCAGAGGTGGACACCCCAAAAGTTTCTATCAGTTCACGTTCTTCAGTTTTTGTGCCCCCAA CTCCTGGCATTCCAGTTAGCCAGATATGGACCCAGAGGTCATCTCTTGCTGCTGATCATGCAGCTGCTGGCAATTTTGATACCGCGATGCGGTTACTTAA CCGGCAACTTGGGATAAAAAACTTTGCCCCCTTGAAGTCCATATTTCTTGATCTTAACACTGGCAGTCATTCACATTTGCCTGCATTTTCGTCTGCTCCA GAAATATCACTTGCAATTGAAAGAGGGTGGACTGAGTCATCTACTCCAAACGTAAGAGGCTCACCTGCGCTTCCATTAAAATTGTCTCAATTAGATGAAA AACTTAAAACTGGTTACAAGTTAACTACTGCCGGGAAATTCACTGAGGCTCTTCGGACATTTGTCAATATTCTTCATACAATTCCATTGGTTGTTGTTGA GTCAAGGAGAGAAGTGGATGAAGTGAAGGAATTGGTTGTCATAGTCAAAGAGTATGTTTTGGGTCTCCAGATCGAGTTACAGAAGAGGGAAATCAAGGAC AACCCTGCACGGCAACAGGAGCTTGCAGCATATTTCACTCATTGCAACCTTCAACTACCACACTTGAGGCTAGCTCTGCTCAATGCAATGGTTATATGCT TCAAGGAAAAGAACCTTGCTACAGCTTATAACTTCGCCAGGAGGCTACTAGAGACAAACCCCACCATTGAAATCCAAGCTAAGAAAGCGAGGCAAGTGTT GGCTGCTGCAGAAAAGAATATGAATGATGCCGCACAATTGAACTATGATTATCGAAACCCGTTTGTAGTTTGTGGTGCGACTTATGTTCCAATCTATCGA GGACAGAAGGATGTCTCTTGCCCATATTGTACTTCTCGATTTGTGCCAAGCCATGAGGGGCAACTATGCACTGTGTGTGATCTTGCAGTAGTTGGGGCAG ATGCTTCTGGATTGCTCTGTTCACCTGCCCAGATTCGTTGATATAGCCGCATGGACCCGTAGTTTTGCTCAAATTTTGTTTCAGGTCAATTTTATGCAGC AGATAGAACACTATTGATCAATTAATATTTCATGGCGGGCTCTAATTTTTTTTTGCTTTCCCTTTTATTCAGTCAAAAATGTTTTTCATTGTCATAAATC AACTTTATATTTTGAGGGTTGCTTGTTTCATACAAAAGTAAAATGTTGTACTTACTATATCAAATGCTTATTTTATGTTGTGCAGACTTAAATTCTGGTA TTTTTATTTGGCAAAATACATTGGTACTTCAATACTCAACTGCAATAGTGATTAATGCTTCTCTGTATTTAATTAAACTCTTCATCTACGAAGGATGTGT TTGGAGGACAACTATATACCTAAAATGATTCAATACCATAAGGGGC
• Tissue: flowers
• Gene name: LI_gene_79866;
• Additional information: details;

Expression of Ll_transcript_35840

FPKM

• FPAB: 8.2
• FPNAB: 14
• LF1: 14.8
• LF2: 12.4
• LF3: 10
• LF4: 9
• UF1: 11.7
• UF2: 12.6
• UF3: 8
• UF4: 7.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_35840

• Blastp: Coatomer subunit alpha-1 from Arabidopsis with 82.21% of identity
• Blastx: Coatomer subunit alpha-2 from Arabidopsis with 81.61% of identity
• Eggnog: Coatomer protein complex subunit alpha(ENOG410XPZS)
• Kegg: Link to kegg annotations (AT1G62020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460729.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;