Id Trinity | FTRINITY_DN58764_c1_g1_i11 |
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Name Transcript | Ll_transcript_33686 |
Sequence | CTGAAATAAAAATAAGTATACATTAAAGTTTGATTCTGTGGGTTACCTGTTCTGCTTTTCTGGCTTTTCTTGCTTTCTTAATTTTCTTTCAGAGTGGTGT AACTTTGTCTTTTATTTCCCAATACTTTATATCAATACTTCATCTTCACATTAACCCTAATAACAGGGGAGGGGAGGAATATGTGAAAAACTGAGAAAGG GTATATTGAATGTAGGTTGAGGAGCTGTTTTTGGCTAGATAAGGTGTTACTTTCAAAGTGGTGTTGGACAAATGTTGTTTCTTTTTCAAGCTTCATTTAA GATATCTGTAACTTTGTCTTTTATGGAATAGACCATTCTTTATCTTTAACCCTTACATGGGTTATCATTGCTCTACTTTACTTTACTGCTTCATTTTTGT TATATAATTTGTAGGGAAAAAACAAAACCATGCAGACCCTCTTACCTATATAGATTAATTACTCTTTGCTTTCTTAGATGCTTATCAATTCCTGTTTCCC CTGCTTTGACTTTCCTATTATATGCTCTTCTCTTATAATTTTCATTCTTTCTGTTGCTACAAACTTCCATTCCTGCTTGCTCTACCCTCTAGCTGTAAGT GGAAACTATGGTTGTTTCTTTTGTTACTCCTTAATTCCTTATATTCAAACCATTTTGGAAGCTAAATTCTAAAGGGGTTCTGCAAGTTCACTCACTGTAT TTATTGTCTGATATAACAAACATTGTCTGTGAAATTGAAAATTTATGCAAGTTGGTTGGGGACTACCAATTTATGAGTCCTTGAAACTCTGTAGTGCTGC TATTTCAAACCCTGTATAGCTACTAGCTAGTGTACTAAATGTTAAAGCTTTCAATGCATATACAATCCTTTATTTCAGAAGTCAATACACTATCTACTCC TATGACCTTATCTTTGTTTTAGTACTTGGTAGTTGGTATTGAAGGTGAAATGCCTTGACTCTAATGTTTATTGGCCAAACATGTGTTTGTTCAGTTCTAC CTATTTTACCTTATTCACATACACAGGCTACAAATTTTAGGTCAGAGAAATAGTCTTCCAACCCCCTTATAAAGCAAGAGAAGATTAACATTCATTCCTT GCTGCAGCATAGAATAGAAACTGAAAAATGGGGGTGCTGTATAATCTTCAGATTGAAAATTGTTGTATGGGTTGGAATAAATGAAGCAGGAGCTCAAATT TGTTTTTGCTTTTGTTATTAGCTTGCTCTGGATTCAGCATTCATTATGTGATAAACCATCTAATACATCTGTCCTAAGCCAGTGGAAATGTAGATGTTCT TCCTTTCCAGGGAACCAAAGCTACTCTCTTGCTAATTGCTCTAAGTCTTGTGATTGCCATTCAGAGGAGAGCACATCCATATGGACATGCATATGTGACC CCGATGGGTTACCCGAAGTGGAAGCAGATGGTCATAGCCCTAAATGCTTTACTGCCTGCAACTGCACCTCGGGAACTGTCCGCATGTCACTAGGATCAAA GAAACACATTTCCGGAAGAACTGTTGTAATTATTTTATTAACATGTCTTTTGTGCACAACCATTGTGTTTCTGGCCTCCGTTATAATTTATGTCTACCGA AGAGACAAATGTCCTATTCAATTACCAATATTTTCATCAGATAAGGAGACAAGTGGTAGTACAACCAACTTAATTAGTCATAGGATAGAGGTTTGTTCAG TGCCAGAAACAAAATTCACTACAAGTTCTCCTATTTGTCATATTACAGGATGCTTTCCGAAAGCCTCCTTTATATTTGGGATCCAAAAAGAAACTTTGCA TGGAAATATTATTCAATTTTCGTTTGATGAACTAGTGAATGCCACAGAAAGCTTTTCAGCCTCCAACCTAATTGGACTAGGTGGAAGTAGTTACGTATAT CATGGTCGTCTGAAAGATGGTAGTGATGTGGCAGTTAAGCGACTAAAAGATCAAGGAGGGCCGGATGCAGACTCTAAATTTTTCAAAGAGATTGAATTAT TCTCTAGACTTCATCATTGTCATTTGGTACCTTTGCTTGGATACTGCTCAGAATTAAAAGGAAGGCTTGTTCAGAGGTTACTAGTATTTCAGTACATAAT TAACGGAAATTTGAGAGACTGTTTGGATGGAGTTTCTGGACAAAATTTGGATTGGTCTACTCGTGTTGCAATTGCAATAGGAGCTGCAAGGGGCTTGGAA TATCTCCATGAAGCAGCTGCTCCAAAAATTCTTCACAGAGATGTCAAATCATCAAACATTCTTCTCGATGAAAATTGGCAAGCAAAAATAACTGATCTTG GTATGGCCAAAATCTTGAGATCTGATGACCTACCCAGCTGTTCAAGTTCTCCAGCTAGAATGCAGGGAACATTTGGCTATTTCGCACCTGAGTATGCTAT TGTTGGGAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGTGGTCGCCATCCCATCCATAAATCTATGGGCAAA GAAGAAAGCCTTGTTATATGGGCGGTTCCACGTTTAAGGGATAGTAGGCGAGTCATAATGGAGTTGGTTGATCCAAAATTGAATGGAAATTTCCAAGAAG AAGAGGTGCAAATAATGGCATACTTAGCAAAGGAATGTTTACTGCTGGATCCTGACACTCGACCAACCATGAGTGAGGTTGTTCAAGTTCTTTGCAGTAT CTCCCCAGGCAAATCTTGGAGTAGAAGAAAAATTTCAGCTAATCTGTTTCAGGAACATGATGATACAGAGAAGCAAAGACAAGTTCATAGTTCATTGACA CTGGATATTAATCACAAAATTAAAGAAGCAGCTGAGCATGAAGATAATTTCCTCTTGACTTCTAAAGATGAATGCTGGCATGCATCAGAAGAGGAAATTG TAGATCTAACTGAACCACGGTTTGAATCATTTTGCATGACAAATACCCATTCCCCTTGAAAACATAAAGCACCTTCATGAGAAGAAGGCATAAGTTTCTT GAATAGTTACATTGTGGTGCTATATATTTATTACTTGTACTACAAGTTATTATGCATGACTCATAGAGTTCATGCATAAGTTTATCTACATTTTTTCCAC GTTATTTGGAAAGGAAGAGCTCATAGTCATAGACTCAGAGGTTGTGAGGTTAGCACAGAAATACATTGGTTTTATTTTTGTAAAGAAAGAAAACATAGGA TGATAAGAGATTCTAGTTGTATTTGAAGAAAAATCGAACACACATTAAAGGTTTTGGTCATAGAATATAATTATTTTGCAATTATTATATTCTAGTTCCT TGTATTATGCTTCTCCTAATGAAACTGAGCCGGACGTCAAATCGGAATAGGTCTTGTAGTAGGTTTAATTGGTTCAAACGATTAAACTGTCTGGTCTGAC TGAATGATTTAATACATAATTAATATTTTTT BLAST |
Tissue | flowers |
Gene name | LI_gene_79880; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_33686
Blastp | Receptor-like serine/threonine-protein kinase NCRK from Arabidopsis with 50.51% of identity |
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Blastx | Receptor-like serine/threonine-protein kinase NCRK from Arabidopsis with 50.51% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT2G28250) |
CantataDB | Link to cantataDB annotations (CNT0000711) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448749.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |