| Id Trinity | FTRINITY_DN58784_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_34768 |
| Sequence | CACTGAAAAAGCTGAACCCCATTCATCTTCTGAAATTTCTTACACATTTCATTTCATTTTCATTTCAATTTCATTTCCATTTCATCATCCTTCTTCTTTC TTCTTTCTTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTCTTCCTATGACTCTTCTTATTCAATCCCTTTCTCCCATTTCTATGGCCACCTTTTCCAA CCAGATTCGATTTCTTCTCAATTCCTTCAACCACCTCAACTTTCACTCCGTTTTTCATCACCTCATTCAGTTCACTGAATTTGGCACTGTTGGGAGCATT TTGTTGCTTCAAACATGCTTGGATCACTTCAACTTTGCCAAAAGAGATGTGAAAGACATTCAGCCCGAGCAAATTCTTGTGGATGTCGTCAAGTACCTCT TGGACAAACCTAACTTCAATGCAGTGTTTTCTGAGTCCATGAAGAATGTGGAAATCAATGAAAGCTTTTTAGAAAGTTTTTGCAATGGATTGAAGTTGTC TTTAATGGAAAAAATTGCCATCGGTCTTTCTTTATCTGATTCTGAAAATCCCGATGCCAAGCTTTGCGGCAAGAATTTTTGCATGGCTCAGATTGAGAAA TTGTGTGCCAATCCTGGTTCCTTGAATTGCGATGAGCTAATTCACGATATTATCATGTTCCTCAAGCAGTCTGAGGGTCTTTCCAAGTATTTAGATTCCT TTATGCAGATATTATCGCTGGTGCAGTTCAAGGACACACCGTCTTTTGTTCTGAATCCGTTGCTACCTGATGAGATGCGCGAGGCTGAGTTTTTAAGGAA TATGGAGCTGTTCCATGTGGGCGGAGATAATGATTTTGATGCTATTTTGGCTGACATCCAGAAGGAAATGAACATGGGAGAGATTGTGAATGAATTAGGC TATGGATGTACAGTTGATGTCTCACAGTGCAAGGAAATCTTTTCGCTCTTCACACCTTTAACCGATAACACCCTCTCTAAATTACTTGGTTCTATTGCTC GTACCCATGCTGGGCTGGAGGACAACCAGAGCACATTCTTAACTTTCGGCGCTGCCCTTGGCTACAATTTGCCTGAGCTGCCACCACTGAACTCTTGGAA GATCGATGTCTTGATAGATACAATCAAGCAGCTTGCACCTCAGACCAATTGGGTACAGGTTTTTGAAAATCTTGATCATGAAGGATTTTTCCTTCCTAAT GAGGAAGCGTTCTCTTTTCTCATGTCTGTATATAAACATGTCTGCAAGGAACCGTTTCCTCTCCATGCCATATGTGGGTCTGTATGGAAGAATACTGAGG GCCAACTATCTTTCCTCAAATTTGCTGTATCAGCTCCACCAGAAGTGTTTACCTTTGTCCACTCTGCAAGACAACTGGCATTTATCGATGTGGTTAATGG TTATAAGTTTCAGAATGGGCATTCCAACCATGCATGGCTGTGTCTTGACCTGTTGGATGTCCTTTGCCAGCTAGGTGAGAGGGGTCATGCCAGTTCTGTC CGACCGGTCTTTGAGTATCCCCTGAAACAATGCCCTGAAATCTTGCTTCTTGGGGTGGCACATATCAATACTGCTTACAGCCTCTTCCAGCGTGAAGTAT GTCAGATTGTTTTCCCCATGATAGTGAAAAGGGCCGGTGGCAGTGAAATGATTCTACACCTTTGGCATGTTAATCCTAATCTGGTTTTGCGAGGGGTTAT GGATTCTCAAAAGAACGACATAGACATTCTTACAAGAATTGTGGACATCTGCCAGGAGCTAAAGATTCTGTCATCCGTGGTCGAAATTATTCCCTCTTTC TATGGCATTAGGTTAGCAGCTGTTTCTGGTAGAAAAGAATATCTTGACCTCGAGAAGTGGTTGAATAACAACTTAACTACATACAAGGATGTCTTCTTTG AGGAGTGCCTTAAGTTCCTAAAGGATGTTCATCTTACTGGAGCACAAGACCTATCTGGCAAATCTTTTCATCAGTCTGGAGCTGTTCTGAATCTATATGC CGAGTCTACTGCTACCTTCTTGAAGGTTCTTAAATCTCATGCGGACTTGGTTACCTCTAGGCAACTTTCTGAGGATCTGAAGAGGTTGCATATATTTATA GATTCAAATCCAAGGCTGCAAAATGGAGGGACAACTGATTCATCTGCTTCTGATGGATATGCGGATGATATTGAAGCAGAAGCAAACTCCTACTTCCATC AAATGTTTTCTGATTCGCTAAGCATGAGTGAAATGGTGGAAATGCTTGCCCGATTGAAGGAGTCTTCTGTGAAGAGGGAGAAATCAATTTTTGAATGCAT GATCGCAAATTTGTTTGAGGAGTATCGGTTTTTCCAGAAATATCCTGAAAGGCAACTCAGAATTGCTGCTCTTCTCTTCGGTTCTGTGATCAAGCACCAA CTTGTAACTCATATTTCGCTGGGGATTGCTCTTCGTTATGTTCTTGATGCATTACGCAAGCCTACAGACTCAAAAATGTTTATGTTTGGAAGTATGGCAT TGGAGCAGTTTGTGGATCGTCTTCCTGAGTGGCCTCAGTATTGTAATCATATTCTGCAAATTTCCCATTTGCGCATTACGCATTTGGAGGTAGTTGGTTT CATTGAAGAGACTCTTGCCAGGATTTCCTCTGGTCATTCAGACGGAGAAGGGGTGAGCCTTGCTTCTGGTATTAGTAGCCACAATTCTGCACCAGCTACA CTAGGGCATGTAGAGGTAAAAGTAAATTATCTTCTCCATTTTTGTCAGTTTTTTTCACCACCCCATTCTTTGTTTTTTATTTTATTTTCGGCAGAACTAC TAAATTCGTGCTCCAAGTTTCTTGTTTTCAAGTAGGTCCTATAAGTTTTTTGTTTGAAACATCTTTGTTATTTTCTGTTTCTAATTGGTCGTAAAAGTTT CCCCCTACTTGTTTTCTAGCTTAAAACTCAATTTTTATTTGTATGACACCAGAGTTGTGAATTTTGGTGGTGAATTAAGAGGATTTAGGAGTAAAAACTG CGGGGCAGGACCAAATTGAAAAGAGAACCTTACTTCAAGGACCAATCTAGTAGTTTGTCCTTTACTTTTTGTAAATGCGAGACATATTTTGTACTTATTT TAATGAAAAAGAAAATGACAAGCCATATATCCTTGTAGATGCACATGTTCGTTATTTTCAACTTCTAAAATTATGTATGGTAGTACAATATGATCTTACT TCAGTTGGTTCTTTTGAAGCATTTGGATCTGGTCGAAAATTAGTCAATTAGCAATGTGGAGATATTTCTATAGAAGAGAAAGAAAAAAAGATATGCCGTT GTGGTAATTTTCTGTTTGATGTAATCTTTTTGTATACGCCTTGTCCTTTTGGCAGTTCAATGCATCTAGCATCACACAACCTGGGCAGCAACATATGCCT CTGCAGCTTCAACAGAGACGTGACATTCCCCTGGATCATCGTTACAAAGCTTCCGTCGGACTTGGTTCATCTACAGATGTGAAACCACTCTTATCTTCTC TAGGGCAATCTTCAGTTGTTACACCTCCTGATGCTTCTAATACCAATAAGTTACATAGCACAGTCAGTGCCTCGTCAATGCTAGCTTCTGGTTTTGCCCG TCCTTCCCGTGGAGCCACTTCTGCTAGGTTTGGGTCCGCCTTGAATATTGAAACTTTGGTTGCCGCTGCTGAGAAAAGAGAAACTCCCATTGAGGCTCCA GGATCGGAGGTTCAGGACAAGATATCATTTATAATTAATAATATTTCTGTTTCTAATATTGATACTAAAGCTAAAGAGTTCACTGAAATTATGAAAGAAC AGTACTATCCATGGTTTGCGCAGTATATGGTTATGAAAAGGGCGAGCATTGAGCCTAATTTCCATGATTTGTACCTGAAGTTCCTGGATAAAGTTAATTC GAAGGCTTTGAACAAAGAGATTGTCAAGACAACTTATGAAAATTGCAAGGTTCTTTTAGGATCAGAGCTTATAAAGTCAAGTTCAGAAGAGCGTTCTTTG CTTAAAAATCTGGGAAGCTGGCTAGGAAAGTTAACGATTGGGCGCAATCAAGTACTGAGGGCTCGTGAAATAGACCCAAAATCTTTGATTATAGAGGCAT ATGAGAAGGGACTGATGATTGCTGTTATTCCATTTACTTCAAAGATCCTTGAACCATGCCAAAGCAGTCTTGCATATCAACCCCCTAATCCTTGGACAAT GGGCATTTTGGGATTGCTTGCTGAGATTTATTCAATGCCGAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATTCAAAAACTTAAGCGTAGAT TTGAAGGATGTTACCCCTACTTCTCTCCTGAAGGATCGCAAAAGAGCAATTGAAGGAAATCCTGATTTCTCTAATAAAGATGTAGGAGTTTCTCAAGCAC AAGTGATTTCCGATATCAAATCTGGCCCTGTACCTCCAGTAAATCAAGTGGACTTACCACCCGAGGTTACAAATTTATCTAATACTGGGGGTCATCCACA TATGCTATCTCAGTATGCTGGTCCTCTTCATATTTCTATGGGGACATTGATGGAGGAGGAGAAGGTAACACCTCCGGGCTTATCTGATCAACTTCCCTCT GCTCAAGGGCTGTTACAAGCAAGTCCTACCCCGCCACACTTTTCTATTAGCCAGATCCCAACTCAGATACCTAATATTGGGACTCATGTTATTATCAATC AAAAGCTCAGTAGTTTTGGGTTGCAAATGCATTTTCAGAGAGCCGTACCCATTGCAATGGATAGAGCTATCAAAGAGATTGTGTCTAGTATTGTTCAGCG TAGTGTTTCCATAGCAACACAAACAACAAAGGAGCTTGTTTTAAAGGACTATTCCATGGAATCAGATGAGACTCGCATATTAAATGCTGCACACTTGATG GTTGCTAGTCTGGCTGGGAGTTTAGCTCATGTTACATGCAAAGAACCTCTGCGAGCATCAATATCAAGTCAGCTAAGGACTTCACTTCAGAATTTAAGTA TTGGAAATGAAATTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTTGGTTGTGCAGTCATTGAACAAGCTGCTACGGATAAGGCAAT AAACACAATTGACACAGATATTGGTCAACAACTTTCGTTGAGAAGGAAGCATCGAGAAGGTATGGGCTCTACATTTTTTGATTCAAACTTGTATACACAA GGTTCCGTGGGTGGTGTGCCAGATTACCTTCGCCCAAAACCTGGTCAGTTGTCCCTATCACAGCAACGTGTCTATGAGGACTTTGTTCGTCTACCCTGGC AAAATCAGTCTAGCCAGAGCTCAAATTCTATGTCTGCTGTTCAATCTGGCAATGCTGATCTCAGTGGCACCAGTGGTTCTGTAAGCATGGGATACGATGG GGTCTCTCGACAAGTAGATGATATGGCCGAATCTAATCTCGCTTCGCAATTTAGTGCTTCCTCAATTCACAGTAGAACTGCTGACAGTTCTTCCCAGCTT AGCTTGGAGAAAGATTCTGTTGCCTCTTTCCCTTCAACTGCCTCCACCCCTGACTTGCAAGCAGTTGATTCATCTGAAGCTGTGAAAGAATCTGGAGCTT CTTCCCAACCCCAGGTTTCATCAGGTGCTGTGGAGCGTTTTGGAACTAGCTTCTTGGAATCTTCTCTCACTACAAGGGATGCTTTGGATAAATACCAAAT TGTCGTTCAAAAGTTGGAAGCTTTGGTTAACAATGATTCCAGGGAAGCAGAAATACAGGGGGTCATTTCTGAGGTTCCTGAAATCTTACTCAGATGTGTT AGTCGAGATGAGACTGCTTTAGCTGTTGCTCAAAAGGTTTTCAAAGGTTTGTATGATAATGCATCAAACAGCATTCATGTTGGTGCTCATCTCGGGATCC TGACTGCTATTCGTGATGTTTGCAAGCTTGCTGTCAAGGAGCTAACTAGTTGGGTAATTTACTCGGAAGAAGAAAGGAAATTTAACAAGGACATTACTGT TGGTCTCATCCGCAGTGAATTGCTAAATCTTACTGAGTACAATGTTCATATGGCAAAACTTATTGATGGGGGAAGGAACAAGGCTGCTACAGAGTTTTCC ATCTCTCTTCTTCAGACCTTGGTTATTGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTCGTTGATGCTTTGGCAAAGCTTGCTACGAAGCCTGGAT CCCCGGAATCATTACCACAACTGGTTGAGATGGTTAAGAATCCTACTGCTAGTGCTGCTGCTTTATCTGCTGGTAATGCTGGAAAGGACGACAAGGCAAG ACAATCAAGAGACAACAAGGGCCCTGGTCTGCTTGTAGCAAACAAGGAAGAGTTAACCAGTGTAGAGTCTGTTGAACCAGATCCTGCTGGATTCCGTGAT CAGGTTTCCATGTCGTTCGCAGAATGGTATAGGATATGCGAACTTCCTGGTGCCAATGATACTGCTTCTTCCCACTTCATCTTACAGTTGCATCAAAATG GTTTGCTTAAGGGGGATGATTTAACAGATCGCTTTTTCCAGCTGCTGATGGAACTTGCTGTTACACATTGCTTGTCCACTGAGGTGATCAATTCAGGAGG ACTGCAATCTCCTCAACAGCTACAGCCAATGTCATTTCTTGCAATTGATGTCTATGCGAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTCTTT CTTCTTTCCAAGATTCTGTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80074; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_34768
| Blastp | CCR4-NOT transcription complex subunit 1 from Danio with 28.88% of identity |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 1 from Silurana with 35.19% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(COG5103) |
| Kegg | Link to kegg annotations (448949) |
| CantataDB | Link to cantataDB annotations (CNT0002916) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463582.1) |
| Pfam | CCR4-NOT transcription complex subunit 1 CAF1-binding domain (PF16415.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |