| Id Trinity | FTRINITY_DN58784_c0_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_34781 |
| Sequence | AAACAAAACAGAAATTCCTTAACATATTTCATCATCGTTGTTACTACTTTTACCTTTGTTGTTCAAATCCTTTGTACCCATTACAATGATTTCATTTTCC ATTATAGCTTCCAAGCAGATTCGGTTTCTGCTCAATTCCTTGAACGAAGTCAACTTTCACTCCGTTTTCCATCAACTCATTCAGTTTGCTGAATTCGGAA CCGTTGGGAGCATTTTGCTGCTTCGAATATGCTTGGATCACTTTAATATTGCTAGAAGAGATATGAAAGACATGCAGCCCGAGCGGATTCTTGGAGATGT CGTCAAGTACCTCTTGGAGAAACCTAACTTCAATGCAGTGTTTTCTGAGTCCATGAAGAATGTGGAAATCAACGAGAGCTTTTTAGAAAGTTTCTGTAAT GGATTGAAGTTGTCTTTAATGGAAAAAATTGCAGTTAGCCTTTCTTTATCTGATTCTGAAAATCCCGATGCCAGGGTTTGCGGCAAGAATTTTTGCATGG CTCAGATTGAGGAAGTGGTTGCCAATCCTGGTTCTTTGAATTGCCATGAGCTAATTCACGATATTATCATGTTCCTCAAGCAGTCTGAGGGCCTTTCCAA GTATGTGGATTCCTTTATGCAGATCTTATCGCTGGTTGAGTTCAAGGATATGCCGTCCTTTGTTTTGAATCCATTGCTACCTGATGAGATGCGCGAGGCT GAGTTTTTAAGAAATCTGGAGCTGTTCCATGAGAGTGGAGAGAATGATTTTGATGCTATGTTGGCTGACATCCAGAAGGAAATGAACATGGGAGAGATTG TGAATGAATTAGGCTATGGATGTACAGTTGATGTCTCACAGTGCAAGGAAATCTTTTCGCTCTTCACACCTTTAACTGATACCACCCTCTCTAAATTACT TGGTTCTATTGCTCGTACCCATGCTGGGCTGGAGGACAACCAGAGCACATTCTTAACTTTCGGCACAGCCCTTGGCTACAACAACTTGTCTGAGTTGCAA CCATTGAACTCTTGGAATATCGACGTCTTGATAGATACAATCAACCAGCTTGCACCTCAGACCAATTGGATACAGGTTATTGAAAAACTTGATCATGAAG GATTTTTGCTTCCTAGTGAAGAAGCATTCTCTTTTCTCATGTCTGTATATAATCATGCCTGCAAGGAGCCGTTTCCTCTCCATGCCATCTGTGGGTCTGT ATGGAAGAATACTGAGGGTCAACTATCTTTCCTCAAATATGCTGTATCTGCGCCACCAGAAGTGTTCACCTTTGCACACTCTGCAAGACAACTGGCATAT ATCGATGTGGTTAATGGTTCTAAGCTTCAAACTGGACATTCTAACCATGCATGGGCATGTCTTGACCTTTTGGACGTCCTTTGCCAGCTAGCTGAGAGGG GACATGCCAATTCTGTTCGACCGATTTTTGAGTATCCCCTGAAACAGTGCCCCGAAGTCTTGCTTCTTGGGATGGCACATATCAATACTGCTTATAGCCT CGTCCAGCATGAAGTATGTCTGACTGTTTTTCCCATGATATTAAAAAGTACTGATGGCAGTGGAATGATTCTACACCTTTGGCATGTTAATCCCAATTTG GTTTTGCGGGGGGTTATGGATTCTCAAAATGATGACTTAGACAACGTTACAAGAATCGTGGACATCTGCCAGGAGCTAAAGATTCTATCATCTGTCGTGG AAATTATTCCCTCCTACTATGGTATTAGGTTAGCAGCTGTTGCTGGTAGAAAAGAATATCTTGACCTTGAGAAGTGGTTGGATACCAATTTAACTACATA CAAAGATTTCTTCTTTGAGGAGTGCCTTAAGTTTTTAAAGGATGTACATCTTACTGGATCACAAGACCTATCTGGCAAATCTTTTCACCAGTCTGGAGCT TTTCTGAACCTATATGCCGAGACTACTGCTACCTTCTTGAAGGTTCTTAAATCTCATACCGACTTGGTTACGTCCACACAACTTCCTGACGAGTTGGAGA GGTTGCATATTTCTATTGTAGATTCAAGTCCAAGGCTGCAAAATGGTGGGACTACTGATTCATCTGCTTCTGATGGATATGCGGATGACATCGAAGCAGA AGCAAACTCCTACTTCCATCAAATGTTTTCTGATTCGCTAAGCATGAATGAGATGGTGCATATGCTTTCCAGATTCAAGGAATCTTCAGTAAAGAGGGAG AAATCCATTTTCGAATGCATGATTGCTAATTTGTTTGAGGAGTATCGATTTTTTCAGAAGTATCCTGAAAGGCAACTCAGAATTGCTGCTGTTCTCTTTG GTTCTGTGATCAAGCATCAACTTGTAACTCATCTTTCGCTGGGGATTGCTCTTCGTTATGTTCTTGACGCATTACGCAAGCCTACAGATTCAAAAATGTT TATGTTTGGAAGTATGGCATTGGAGCAGTTTGTGGATCGTCTTATTGAGTGGCCACAGTACTGCAATCACATTCTACAAATTTCCCATTTGCGCAATACA CATTCAGAGATAGTTGGTTTCATTGAACAGGCTCTTGCCAGGATTTCATCTGGTCATGTGGATGTAGATGGGATGAGCTATGCCTCTGGCATTAGTAGCC ACAACTCGGCACCAGCTACATTAGGGCATGTAGAGCCCAATGCATCTAGCATCATACAAACTGGGCAGCAACATATGTCTTTGCAGCTTCAACAGAGGCG TGACATTCCCCTGGATGATCGTTACAGAGCTTCGGTTGGATTTGATTCATCTACCGATGTAAAACCACTCTTATCTTCTGCAGGGCAATCTTCTGTTGTT ACACCTCCTGATGCTTCTAATACCAATAAGTTACATAGCACATTCAGTTCATCGTCAATGCTAGCTTCATCTGGTTTTGTCCGTCCTTCCCGCGGAGCTA CTTCTACAAGGTTTGGATCTGCTTTGAACATTGAAACTTTGGTTGCCGCTGCTGAGAAAAGAGAAACTCCCATTGAGGCTCCAGGATCAGAAGTTCAGGA CAAGATATCATTTATAATTAATAATATTTCTGTTGCTAATATTGAAACTAAAGCAAAAGAGTTCACCGAAATTTTGAAGGAGCAGTACTATCCATGGTTT GCACAATACATGGTTATGAAAAGAGCGAGCATTGAGCCTAATTTCCATGACTTGTACCTGAAATTCCTGGATAAAGTCAATTCAAAGGCTTTGAACAAAG AGATTGTCCAGGCAACTTATGAAAATTGCAAGGTTCTTTTAGGATCAGAGCTTATAAAGTCAAGTTCTGAAGAGCGCTCTTTGCTTAAAAATCTGGGGAG CTGGCTAGGAAAGTTAACTATTGGACGAAATCAAGTACTGAGGGCTCGAGAAATAGACCCAAAATCTTTGATTATAGAGGCATATGAGAAGGGACTGATG ATTGCTGTTATTCCATTTACTTCAAAGATCCTTGAACCATGCCAAAGCAGTCTTGCATATCAACCCCCTAATCCTTGGACAATGGGCATTTTGGGATTGC TTGCTGAGATTTATTCAATGCCGAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATTCAAAAACTTAAGCGTAGATTTGAAGGATGTTACCCC TACTTCTCTCCTGAAGGATCGCAAAAGAGCAATTGAAGGAAATCCTGATTTCTCTAATAAAGATGTAGGAGTTTCTCAAGCACAAGTGATTTCCGATATC AAATCTGGCCCTGTACCTCCAGTAAATCAAGTGGACTTACCACCCGAGGTTACAAATTTATCTAATACTGGGGGTCATCCACATATGCTATCTCAGTATG CTGGTCCTCTTCATATTTCTATGGGGACATTGATGGAGGAGGAGAAGGTAACACCTCCGGGCTTATCTGATCAACTTCCCTCTGCTCAAGGGCTGTTACA AGCAAGTCCTACCCCGCCACACTTTTCTATTAGCCAGATCCCAACTCAGATACCTAATATTGGGACTCATGTTATTATCAATCAAAAGCTCAGTAGTTTT GGGTTGCAAATGCATTTTCAGAGAGCCGTACCCATTGCAATGGATAGAGCTATCAAAGAGATTGTGTCTAGTATTGTTCAGCGTAGTGTTTCCATAGCAA CACAAACAACAAAGGAGCTTGTTTTAAAGGACTATTCCATGGAATCAGATGAGACTCGCATATTAAATGCTGCACACTTGATGGTTGCTAGTCTGGCTGG GAGTTTAGCTCATGTTACATGCAAAGAACCTCTGCGAGCATCAATATCAAGTCAGCTAAGGACTTCACTTCAGAATTTAAGTATTGGAAATGAAATTTTG GAACAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTTGGTTGTGCAGTCATTGAACAAGCTGCTACGGATAAGGCAATAAACACAATTGACACAG ATATTGGTCAACAACTTTCGTTGAGAAGGAAGCATCGAGAAGGTATGGGCTCTACATTTTTTGATTCAAACTTGTATACACAAGGTTCCGTGGGTGGTGT GCCAGATTACCTTCGCCCAAAACCTGGTCAGTTGTCCCTATCACAGCAACGTGTCTATGAGGACTTTGTTCGTCTACCCTGGCAAAATCAGTCTAGCCAG AGCTCAAATTCTATGTCTGCTGTTCAATCTGGCAATGCTGATCTCAGTGGCACCAGTGGTTCTGTAAGCATGGGATACGATGGGGTCTCTCGACAAGTAG ATGATATGGCCGAATCTAATCTCGCTTCGCAATTTAGTGCTTCCTCAATTCACAGTAGAACTGCTGACAGTTCTTCCCAGCTTAGCTTGGAGAAAGATTC TGTTGCCTCTTTCCCTTCAACTGCCTCCACCCCTGACTTGCAAGCAGTTGATTCATCTGAAGCTGTGAAAGAATCTGGAGCTTCTTCCCAACCCCAGGTT TCATCAGGTGCTGTGGAGCGTTTTGGAACTAGCTTCTTGGAATCTTCTCTCACTACAAGGGATGCTTTGGATAAATACCAAATTGTCGTTCAAAAGTTGG AAGCTTTGGTTAACAATGATTCCAGGGAAGCAGAAATACAGGGGGTCATTTCTGAGGTTCCTGAAATCTTACTCAGATGTGTTAGTCGAGATGAGACTGC TTTAGCTGTTGCTCAAAAGGTTTTCAAAGGTTTGTATGATAATGCATCAAACAGCATTCATGTTGGTGCTCATCTCGGGATCCTGACTGCTATTCGTGAT GTTTGCAAGCTTGCTGTCAAGGAGCTAACTAGTTGGGTAATTTACTCGGAAGAAGAAAGGAAATTTAACAAGGACATTACTGTTGGTCTCATCCGCAGTG AATTGCTAAATCTTACTGAGTACAATGTTCATATGGCAAAACTTATTGATGGGGGAAGGAACAAGGCTGCTACAGAGTTTTCCATCTCTCTTCTTCAGAC CTTGGTTATTGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTCGTTGATGCTTTGGCAAAGCTTGCTACGAAGCCTGGATCCCCGGAATCATTACCA CAACTGGTTGAGATGGTTAAGAATCCTACTGCTAGTGCTGCTGCTTTATCTGCTGGTAATGCTGGAAAGGACGACAAGGCAAGACAATCAAGAGACAACA AGGGCCCTGGTCTGCTTGTAGCAAACAAGGAAGAGTTAACCAGTGTAGAGTCTGTTGAACCAGATCCTGCTGGATTCCGTGATCAGGTTTCCATGTCGTT CGCAGAATGGTATAGGATATGCGAACTTCCTGGTGCCAATGATACTGCTTCTTCCCACTTCATCTTACAGTTGCATCAAAATGGTTTGCTTAAGGGGGAT GATTTAACAGATCGCTTTTTCCAGCTGCTGATGGAACTTGCTGTTACACATTGCTTGTCCACTGAGGTGATCAATTCAGGAGGACTGCAATCTCCTCAAC AGCTACAGCCAATGTCATTTCTTGCAATTGATGTCTATGCGAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTCTTTCTTCTTTCCAAGATTCT GTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80074; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_34781
| Blastp | CCR4-NOT transcription complex subunit 1 from Danio with 28.52% of identity |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 1 from Danio with 28.56% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(COG5103) |
| Kegg | Link to kegg annotations (448949) |
| CantataDB | Link to cantataDB annotations (CNT0002916) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463582.1) |
| Pfam | CCR4-NOT transcription complex subunit 1 HEAT repeat (PF16418.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |