Id Trinity | FTRINITY_DN58788_c0_g1_i3 |
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Name Transcript | Ll_transcript_33218 |
Sequence | TGGAAATATTACAATCACTCCAAAATTCCATCTTTTAGTACTTATTTACATTTAAATCCAAATTCATTGTTCCTACCCAAACACAAATTTTCTGTTTCAT TACATTTGAAATTAAATTAAGAAAAAAAAATATTAGGGTTTTCAGAATAATTTTCAATTCCCGAATTTTACCAGATCTGATTCATCTGGATTCCAATTCC TCAACTCAATCGCATTCCACGTCAATCATTATCATTATCCCCCTAACAATTTGAACTTTCCATTTCATCTCTGACCCTTCAAAAGTGAGAGAAAGAGAGG GAAAAACAAAAACCCATTATCAAAATGTTTCGTTTGGAGCAGGAAAAGATCCGAAAACGATTTTGATTTCAAAAGTTCTCTCCTTTTCCTCTATCAAGTG GTGGGTTTTTCCATGGCTGACGCTCTCACGGTGATTCCGGCAGCCGTACTCCGCAACCTTTCTGATAAGCTTTATGAGAAGCGAAAGAATGCTGCTCTTG ATGTTGAAGGGATAGTGAAGCAGCTTGCTAGTAATGGGGAACATCATAAAATAACTGCTGTTATCAATTTGTTGACCAATGAATTCACTTATTCATCACA AGTAAATCAGAGGAAGGGAGGATTGATAGGATTAGCTGCAGTAACTGTTGGTTTGACTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCTCCTGTT TTAAATTCTTTCTCCGACCAAGATAGCAAAGTTCGTTATCATGCGTGCGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGGGACTTTATTATATTCT TCAACCAGATCTTTAATGCCTTGTGCAAGCTTTCTGCAGACTCAGACGGCGAAGTACAAAGTGCTGCTCACCTCTTAGATCGGCTTGTGAAGGATATTGT GACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCACTGTTAAGGGAGCGCATGAATGTATTAAATCCATTTGTCCGCCAGTTTTTGGTTGGATGG ATAACGGTATTGGACAGTGTCCCAGATATTGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTAAGTGATTCTAGTCATGAAA TACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAGATCAAGAACTCACCGTCTGTAGATTATGGTCGAATGGCTGAAATATTGGTACAGAG GGCAGGTGCTCCAGATGAATTTACTAGGTTAACAGCAATCACATGGATAAATGAGTTTGTCAAACTCAGTGGAGACCAGCTTGTTCCATATTACGCGGTC ATTCTTGCAGCCATTTTGCCTTGCATATCAGATAAAGAAGAGAAAATTAGAGTGGTTGCTCGTGATACCAATGAAGAGCTACTTGCCATCAAGGCTGATC TGGCTGAAGCGTTTGATGTAGAAGCAGTCCTCTCAATTGCTAGGAGGTGTAGTTTTTCTGACCTGGGAAAAGTGGCTAGGTTTGAATTTTCTAATACTTG CAATTGAAACGTTATGGATTTGTATAGTGGTTTGACCACCTTAGTAGCCATCGTGAAATGATTGGGAGGGTCCTTTTTTTAGCCAACTCTGTTAAGCACA GTGTTTTCTGTAGAATGATTTTTGAATGGTTTGACTGATCAGGCAAATATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACC CTTTTAAACAGATACCGTACCGAGGTGACTGGGTTGTTTGAGTTTAGGCTGTTGTAAATCTGTAGAGTTCTTCTTTCTTAAGATGCCCATTGAAGTTCCG CTTCTATGTCATTTCAGCTCAACTTCATGACCCATTTTTTGTTTATATTTATTTATGTGGAAACCAGCTATTTTTGATATACTATATCATAATAGGTTTT TGATTTCACTGTATAGGAGCTTTAGTTCCATTGGTGGTTGATGGTTGGTAATTCTCTGTAACAAACTTACAATGCTATTCATTTTTATGTGTGCCTTCCC AGTAGGCAGCATAGTTTCGTTGAAGTTTTTCTAGAAATTATAAATTTCATATAATGATTATTTGACCTGGTTTAATTCTATGACGTCACTTAATAATTAT GATGTTTTCAGGTCTAACAAATAATATATAATTTACCTGCGAAACTTTCATTTTGCAAACGTTTTTCTATTAAAGCCAACCCCAGTTTATACTATTTCTG TTCACCTGACGTGTTAAGGTTTTTGTGTGATATACTTTATCCAATGAGAAATTTTGGTATCCCATGCTCTATGTTGACTTTCAATGTCTGAAACAGGTTT TGCAATTTCTGGATGACATATTTGACACCCTAGTTAAGGCACTTTCAGATCCATCTGATGCGGTTGTGCTTCTAGTTCTCGATGTTCATGCATGCATTGC AAAAGATCCTCAGCACTTTCGGCAGCTTGTTGTTTTCCTGGTACACAATTTCCGAGTTGACAATTCCCTTTTGGAGAAGCGCGGTGCTTTGATAATTCGT CGGCTTTGTGTGCTTTTGAATGCTGAGAGAGTTTACCGTGAACTTTCAACAATACTTGAAGGGGAATCTGATTTGGATTTTGCATCACTTATGGTTCAGG TTGGTTGGTACTTGGTACTTTTCCAAGAGCTTAAATAAAAAGCTGCATTACACTCTAGGTCTATCTCCCACTGAACCCAAAAAACAAATATTTTAATGGA ACAGCTACTGAAGCATGTGCCATCTAGTTAATATTATTTATCTGCATGTATCTATGGTCAGGTTATGGTCTACGTCTAATGTTTTTTCCCATTGTTAGCT AATTTATTTTGTGCTTAAACACGAGAAGCCCTATAAGAACTTCATTGTTAGATAATAGACCTACTTCCTCGTTGTCTGTGTTGTACACTAATGAAATTGA TATTGATTCATTGCCTAATCCTGCAGGTTGTTTCTTTGACAATATTAAGTGCAATCACTATTTTCGTAAATCATAAATGTTGTCTTGTTGTAGGCTTCAC TCAATTATGATCTACTTAACTTCAGCTATAAAAAGAATATTATAGAAATATATGTTAAATTCAGAGCCTATGTTTTGCTTGACCACATTGCAAACAGTTC TATGCCTATAGTTGTGGTCCTCAGTTCCTTCGCGTTATTTTCAAAACATGTACAGTTGTCTTTTTGTTTATCGCTGTATTTAGTTTTCCTTTTTTATGAG CCTGACCTTTACAATCCATTGTGGTGGAGTGGTATTCATCTGCATTTGTTTTTCTTTCTCCCATATAAAAAATTTCCAGGCTTTGAATTTGATCTTGCTT ACATCACCGGAGCTCTCTGAAATTCGAGAACTTTTGAAGCAATCGTTGGTAAATACCGCGGGAAAGGATTTGTATGTTTCATTGTATGCCTCATGGTGCC ATTCTCCAATGGCAGTTTTAAGTCTTTGCTTATTAGCTCAGACCTACCAGCATGCGAGTGCCGTGATTCAATCTCTGGGAGAGGAGGATATGAACACCAA ATTTTTAGTCCAGCTGGATAAATTGATTCGCTTGCTGGAAACTCCAACCTTCACATGTCTTAGATTGCAGCTTCTCGAACCTGGAAGACATATATGGTTG TTCAAAACGTTATATGGTCTACTGATGTTGCTTCCTCAGCAAAGCCCCGCTTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCATATCCTTTCA ATGGTGAGCAATCGAAGAGAACACTCCCAGGGAATCCCTACCAATTTCTTCATCACACTGAGGATGGCAACATAACTGTGGATGGTGGAAACTCACATAA TGGTATAAATTTTGCCGCGAGGCTACAACAGTTTAAGCAAATGCAGCACCAGCATCATGTGCACTGGAAAACACAGGCACTGTCACGCAAAATTTCTACG TCATTACCAAAGGATCCACAAAGACAGGAAGAACCACGATTGAGTGATGTTGCTACTTCAAGATCATCAAAGAGAGGCTCAGGGTAGCAAAAATGTTGCT TCTGGACCAATATTTTAGTCTTATTTGTGCACTGATCTTAGTGCAATGTGAACTCTGAATAGGATGAGATATTGATTTGTATAATTGTAAATCATAGTAG CTTGTTTTATTGTACTCATCATAGAAGGTTGGGTTTTGGAATCAAGGATAAAAGCTTGGTCTTTGCTGAGCTCTATTGTTTTGACCATGTAAAAGAGATA CCCACATGGTTCTGTTGTTTTTGTTGAAAACCATGTGGGAGTAGAGGGGATATTTCATTTAGAAAAGATGCATTTGCTTTATCTGTTACTCATTTACTGC CACTTTATAATATAATAAGCTACTTAATTTTGTATATTTGGAGTAAAAAGTGATTTTTTTTATCCTGGTCAAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_80118; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_33218
Blastp | Protein VAC14 homolog from Arabidopsis with 84.35% of identity |
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Blastx | Protein VAC14 homolog from Arabidopsis with 84.35% of identity |
Eggnog | vac14 homolog (S. cerevisiae)(ENOG410XP6E) |
Kegg | Link to kegg annotations (AT2G01690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432671.1) |
Pfam | Vacuolar 14 Fab1-binding region (PF12755.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |