Ll_transcript_36004

• Id Trinity: FTRINITY_DN58798_c0_g5_i2
• Name Transcript: Ll_transcript_36004
• Sequence: AACATAAAACCTTATTGTACAAAGTATAAAGACAGAATACCAAACTGAATGATTAATCAACTGAAGTTTGAATACAAAGTATCCATACATAATACTGAAA TTACATAGAACATAATAAAGGTGTACACATTCTAACTCCCACTAAACTAAAAAATCCTCACATTGTAAAACACCCATGTGAGCAATATGCTCATTAAAGA CCTTGGGTGTGATAGCTTTTGTAAGAGGATCCGCAATCATGGAGTTAGTGCCTAAGTGTTTTATGGAAAGTTGTTCACTTTGTACTTTCTCTTTAACTAG GAACTTAATGTCGATGTGTTTCGACTTTGCTGAACTCCTATTGTTGTTGGAGAACAACACGGCTGACCTATTGTCACAATATAACTTTAGTGGTCTTTCA ATTCCTTCCACAATTCGCAGCCCAATGACAAAATTTCTCAGCCATGTTGCCTGATGTGATGCCTCATAACATGCTATATATTCAGCTGTCATGGTGGATG AAGTCACAAGAGTTTGCTTGGCACTACGCCAAGAAACTGCACCACCAACCAACAAATAGACATAGCCCGAAGTGGATCGTCTACTATCTTGAATCCCACA AAATCGGAGTCAGAATACCCAATGATCTCTAATTGGTCTGATCTCCTATATGTGAGCATATAATCTTTTGTTCCCTTTAAGTACCTCATGACCATTTTGG CTGTTTTCCAATGATCCATTCCTGGATTACTCATATATCTGCCTAAAACCCCAACTATGAACGCTACATTCGAACGCGTAAATACTTGAGCATACATAAG ACTCCCTACAGCTGATGCATAAGGGATCTTTTGCATTTCCTGAATTTTCAGATTTCCTTTAGGGCACTGATTGAGACTAAATTTATCTCCCTTAGCAACT GGAGTATCAATTGGTTTACAATCCTGCATGTCATATCTTTTAAGTACTTTTTCTATATAGCTCTTTTGTGATAATCCAAGAATACCCCAAGATTTGTCTC AGTGTATCTGAATTCCTAATACAAATGAAGCTTCACCAAGATCTTTCAGTTCAAAATTACTAGATAGAAATTTTCTGGTTTCTAACAAGGTACCCACATC ATTAGTGGTAAGCAGTATGTCATCCACATACAAGAGCAAGAAAATATACTTGCTCCCACTGAACTTGTGATACACACAATCCTTGACTGAAGTCATCTCA AAACTAAAAGAGAGAATCACCTCATGAAATTTGTGGTACCACTGACGAGACGCCTGCATTAGCCCATAAATGGATTTTGTCAATTTGCAAACCATATTCT TTTGGTCTCCCATTATAAAGTTTTCTGGTTGCACCATATAAATCTTTTCATCAATGTTTCCATTGAGTAAAGTTGTCTTGACATCCATCTGATGAAGCTC CAAATCATAATGTGCTACAAGAGCCATGATTGTCCTGAGAGAGTCTTTCGATGAAACTAGAGAGAAAGTCTCTTTATAGTCAATCCTTTCCTTCTGAGTA AAACCCTTAGCTACAAGATGAGCCTTATACCTCTCCACATTACCATTAGAATCCTGCTTGGTCTTAAAAATCCATTTGCAACCAATGGGTTTCTTACCTT CTGGTAATGGGACAAGTTCCCAAACTTTATTGTCTTGCATGGATTTATACTCCTCTTTCATTGCTTCAATCCACTTTTCCGAATTGGAACTTTGGATGGC TTCACGAACGTTTAATGAATCATTATCCATTAAGCCATCACCCTCATGTTCCAGGAGATAGCAAATGTAGTCATCTGAAATTGCATTTCTCCTTTCTGTA GTGGATCTACGCAAAGCTATTGGCTCTAGCAACTCTTGTCCATGTTCTTGAGGGTTTTGAGTTTGTTCTTGAGGGTTTTGAGGAGATACCATATGAATCG CATCTGGAATTGATGTTGATTCTTCCTCTAAGACAAAGTTTCTAACTTTATTCATTTTCCCTTCAAACTCAATATCCTCAAAGAACGTGACTATACCCGT CTCAAATATGGATTTTAAATTTGGGTCATAAAATTTATAGCCCCTTGGTTTTTCAGAGTAACCGATAAAGTAGCTGCTCACTGTACGGGAGTCCAATTTC TTTTCATGAGGCCTACGAGGCCTTGCCTCAGCTGGACATCCCCACACATGAAAATGCTTTAGACTAGGCTTTCGCCCAGTCCAATGCTCATAAGGTGTTT TGGCAGTTGCCTTAGTTAGCACCCTATTAAGAATATAAGCTGCAGTCTTAAGTGCCTCTCCCCAGAGTGACTTTGATAAGGTAGAGTGACAAATCATACT CCTCACCATATCCTTAAGTATCCGGTTTCTTCTTTCAGACACACCATTCATGTTAGGCGATCCTGACATGGTGTACTGTGGGACTATATCACATTCCTCT AGGTATTTGGCAAAAGGCCCTGGACGTTGTTCACCTGAACCGTCATATCTACCGTAGTATTCACCACCACGGTCAGATCTGACGTACTTAATCCTTTTGC TGAGTTCATTTTCAACTTCAGCCTTAAAAGTTTTGAACACGTCCAATGATTGGGACTTTTAATGGATAAGAAAAATGTATGCATAACGAGAATAATCGTC TATGAATGATATGAAGTATTGTTGACCATTCCAGGAAGCCGTAGGGAATGGCCCACAAATATCCGTATGTATCAATTCTAAGACGTCTGAAGCTCTATAT GCACCAGATTTCGATTGTTTGGTCTGTTTTCCTTTTGTGCATTTAACACAAACACTAAGGTTTGTGAAGTCAACGGGATGCAAAATCCCATCTGACACAA GACGCTCAATTCTCTTTTGAGAAATGTGACCTAGGCGCTTGTGCCATAATGCACCTGAATTATTATTTTCAATTTTACGCTTAGTACCACGTGATTCCAC ATTTAGAATTTCGCTATAATCAGCTATAGTATTCAACATATAAAGATTGTCATTTAACATAAGTGAACCAGTTCCAACAACATTTGAATTTAAAGACAAC TGAACCGAATTGTTTCCAAATAAACAATAATAACCAAATTTGTCCAAATAAGAAACAAAAATTAAATTCCGTCTAAAAGACGGTACAACAAAGGTGTCTT TCAAATCCAAATAAAAACCAGTACATAATAACAATCTAAAGTGTCCTATAGCTTCCACTGCTACCGATTTTTCATCGCCAACATAGATGTATCTTTCAAC ATAATTAGGCTTTCGGTAGCTCAAGCAACCCTGCATTGAAGCACTGATGTTAGAAGTTGAACCGGACTCTAACCACTAGGTGTTTCCAGGTACTGAAGTT AAATTGACCTCAGAACAGACCAAAGTAAGAAATATACCTTTCTTAGCACGCTAGGCGTGATACTTTACACATTTCTTCTTTATAT
• Tissue: flowers
• Gene name: LI_gene_80201;
• Additional information: details;

Expression of Ll_transcript_36004

FPKM

• FPAB: 0.1
• FPNAB: 0
• LF1: 0.1
• LF2: 0.1
• LF3: 0.1
• LF4: 0
• UF1: 0
• UF2: 0.1
• UF3: 0.1
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_36004

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 38.59% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 36.61% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020987654.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;