Id Trinity | FTRINITY_DN58799_c0_g1_i21 |
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Name Transcript | Ll_transcript_33911 |
Sequence | GAAATGTAGTGGCCAAAGTCTTGTTTAGTATTTTGTGGTGCTAATGTTCATTCGTATTGGCTAAGAGTTTTTCAAACACAAAATTAAAATTACCAAATAA TATTAATATTATTTTGAGGAACATAAGAGAGAAGGAACAAACCCTCATAATCTAAATCATACTCCTCATACTTACATTCAAACCTCAATTTTCAGCTCCA CGTTTTCTCTCTATCTCGTTTTTCTTCGGATTTCATTTTCCCATGGATCTCCTTAATTTTTTGAGCAAAGTCTGGTTGATCAATGAGCAGGATCAAATTG GGTTTGGTTGAGTCTGACTGGGAACGTGCTGTTATTGTTTATTGAGCATATCTATGTTGTAGTTATTTTGTCCGTACTGTAGTTAATGATGAACTTATCG AAGAAAGGACCTCACACCGATACAAAACTAGGCATTCCAAACAAGGCAACCACTTTGAATCCAAATGCAGCTGAGTTTATTCCCTTTTCGCTCCGATCAT CGCTGTCTAGAACTACTAGCTCAGTTGATTCAACAGCCAGGGGAGCTCTTGGGAAAGCTGTTGTAGATCGAACAGAATCATCCATTTCAAATAATTCTGA TGATGAAGTGCACCAATACTGGCGATGTCAGCTCCCTGATGATATAACCCCTGATTTCAAGTTCACAGGAGAAGAGGATCCCCAGGGTCTGAATGACCTC TCTTTAGCACGCTTATCCATACACAGCGACAATGAAGCCTCGGTGTTTCCTTCTTCTAAAGGGAGTAGATATATATTAAATGAGCATGATGAATTATCTC AACAGCTCATTAACGACAGTAATTTTGCAGATAAATTACGGTTTTCCAATTCAAGCTACAGGGAGAACCTGTCTTCAACAAACTTCCTTAGCACTTCAGC AAAGCCATGGGATATGCCAATAGGGAGTACCGACCACCATGTTAGCAGTGGTCAAGAGGGGCTTACTTATGATGACTACTCTGGACAGGGATTCTCAAAT GACATTTTGGTTGAGAATTCAATTATAGATGATACTGGTTTGAATCCTTTGGAGTTTTTAGCTTCTCTATTCCCTGGTTTTGCAGCTGAAAGCATAATAG AAGTTTACTATGCTAATGGATGTGATTTACATCTGACAACTGAGATACTCAATCAGTTAGAGGTAGTTGATCTTCACTTAATAACCGACGTTTGGTTAAA TTGTGGTTCCTTATAAATCTCCTATTGTGTGTTTGCCTGTAAAAGTGTATATGTTCAGTTATATTCATGTGTGGTATTTATTCCTAGCATATTGTAATGC AATATGTTTTAGTAGAATACTACATCTGATGGGATGGATGCTAAGTATTTAGAGCAATACCTGTGGCTTGTTTTGGCAGGGAAGAGCAATCTCCCCATAA AGTTCTCAAGTGATTCAGGTGTAACACAGCTTCCAGTTTCTAATCCAAGTTGCCTGGTACTGGGGTAGTGGGTTGTTTGAGACTTATAGATAATTTCACC CTTTGGTTTTGATCTGCATCTTTCTGAGTTTGGTTATGTGATGTTGGTCCACTGTCATTTTGTTAGAATTTTTGTGAGAAACATAATCTCTTCTGGCATG TGATCAAGTAGTATACTTTGTTGTTCTTTCTGTGCTGTCATTTTTAATCATAAATTCATTATTACTTATTGCCAAGGCACTTTATACTGATTATCTCTTT TTATTCACCCACCCCCTACAAATGTGTAGCTTCAAGTTGACGGTAATTTCAACCAGAATCTGAATTCCAAGACTTTGTCAGCTCCCGATCTCAGTGCAAT GGACTTTCCTGCACTTACTTCACCAGATGGCCAGACTGCTTCTGTAAGATTTGCTGTAGATAGTGTTCAACAAAGTGGCAATCCTTACCGATCGCCTGAC AAAGACATGCTTTTTTCCAAATCTAGCTCTACAGTTCCATCTAGAGGTGCTGTTGACTTTGCTTCAGCTGTTGAGAAGCTGGCTACTCAGGATTCTGGTA TTTGGAAGTATGATAAAAATGGCTTTGGTGATGTTGCCATTGGCTCAAGTAGGAGCTCTCATGTTCTGGCCAGTGGCTACTATGGTGGACATGGGAGAGC CGACTTTGGTGATAGGTTACAGAGCCGTGGCTCAGCTCGGGCAGCTCCTGTTTGGCTTGAAACCGGTGACACCGTTGCAAATATGTATTCAGAGATGCGG GAGGAGGCTCGTGATCACGCACGCTTATGTAATGCATATTTTGAGCAGGCGCAGCAAGCTTATCTTATTGGCAATAAGGACCTAGCAGATGATCTAAGTG TTAAAGGGCAACTGCACAGCATGCATATGAAAGCAGCTCATGGAAAAGCTCATGAATCTATTTACCGCCAGAGAAACCCAGTTGCTCCAGATATGCAGGG AAATGAAAGGGAACACGAGAGGATGATAGATCTACATGGATTACATGCAAATGAAGCGATTCATGTACTTAAACATGAATTAAGTGTGCTGAAAAGCAAT GCCAGAGCCGCGGAGCAATTTTTACAAGTTTATATTTTTGTTGGCATAGGTCAACATACAAGGGGTTCTCGCATTCCTGCTAGACTTCCAATAGTTGTAC AGCGATTTCTACTCGAAGAGGGCCATGACTTCACAGAACCTCAGCCAGGCGTACTTCGTATTGTGATATACTGAGCCATGTATAATGTGTACAAGTTTTT GACACAGTTAAAAGTCACATGTAGACATTGTAGTCATTCTTGTA BLAST |
Tissue | flowers |
Gene name | LI_gene_80205; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_33911
Blastp | Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 62.8% of identity |
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Blastx | Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 61.56% of identity |
Eggnog | smr domain containing protein(ENOG4111EZQ) |
Kegg | Link to kegg annotations (AT2G26280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414983.1) |
Pfam | Domain of unknown function (DUF1771) (PF08590.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |