Id Trinity | FTRINITY_DN58799_c0_g1_i9 |
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Name Transcript | Ll_transcript_33890 |
Sequence | AGTTAGGATCCCAAACAGACACAAGGCTTAGTTCCTCGGACAAGGCAACCACTTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTGCCCTCAGATCAAC TCCATCGAGAAGTACTGGATCTGTAGATCCAACAGCTAAGTTCATTACTTCTGGGTCCCTTGGTAAAGCAGTTTTAGATCGATCAGGATCATCTATTTCG AATAACTCTGATGATGAGGCCCACCGGTACTGGCATTGTCAGCTCCCTGATGATATCACCCCTGACTTCAAGGCCATGGAAGAAGATGAGTCCCAAGGTC TTAACAATCTCTCTTTGGCTGGCTTATCGATACATGATGATGATGAATCTTCAAGGTTTCCTTCTATGGGAAGTAGATTCATATTAAGTGAGAAGCAGCA CCTCAATGAAAATAATATTGCTGCTGATAAATTTAGGTTTTCAAATTCAAACTACAGGGTGGAACCATCTTCCGCAAGCCTTTTGAGCCCGTTAGCAAAG CCTTGGGATAGGCAAATTGGGAATGCCAACCAGCATGTTATTGGTGGTCGAGAGGGACTTATTTATGATGACAACTCTAAACATGGATTCTTAAATGATA TTTTGTCTGATAATGTAATTGTTGATGATACTAGTGCGAACCCTTTGGAGTTTTTAGCTTCTCTTTTCCCTGGCTTTGCGTCAGAAAGCCTGGCCGAAGT TTACTTTGCCAATGGATGTGATTTACATCTGACCATTGATATGCTCACTCAGTTAGAGGGAAGAGCTGGTGCAATTATAAAGTTGTAAGGCGACTCCGGT TTGTAGTTACTGATTCCTGAATCCTGACACCCCATGTGATTCATGCTATGAAGGAGTTATTGGCATTTTATTAGCATTATTTCGATATATAATCATTTAT TGGTATAAGATATAGTAATACAACCATGTCTCTAGATTGTCTTTCATTGTGTTGTTGTCATTGTGACTTGTCATGAACGCTACTCATTTCTTTGGCGTCC TTCTTAATGAAGGAATTATATGTTGATCACCTCCATTTTTTCCCTTCCAAACTTGTAGCTTCAAGTTGATGATAGCTTCAATCAGAATCTGAGTTCAAAG GCCTTGTCAGCTCCCAATCTAACGACAATGGACTTTCCTGCACTTACCTCACCAAATGGTCAGATCACTTATGCAAAATATGGTATGGATAATGCCCAAC AAAGTGGCAATCATTACCTATCATCTGGAAAAGACATGCTCATGTTCAGAACCAGCTCTTCGATTCCATCTAGAGGTGCTATCGACTTTGCTTCAGCTGT CAGGAAATTâBLAST |
Tissue | flowers |
Gene name | LI_gene_80205; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_33890
Blastp | Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 50.61% of identity |
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Blastx | Polyadenylate-binding protein-interacting protein 7 from Arabidopsis with 50.61% of identity |
Eggnog | smr domain containing protein(ENOG4111EZQ) |
Kegg | Link to kegg annotations (AT2G26280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436179.1) |
Pfam | Ataxin-2 C-terminal region (PF07145.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |