Ll_transcript_49940

• Id Trinity: FTRINITY_DN58810_c2_g1_i7
• Name Transcript: Ll_transcript_49940
• Sequence: ATAGAGTTCGTCCTCTCTTATTTCATTATTATTAATATTACCATTTGATCAAAGTTATTCAGAGCGATCCGAGTTGTAAACTGAGTTATTCAGGGGGCGA GTCATTGACTCAGTGGATACAGAGACAGACGCCAAATTCTGAAACCTCCACGAGTCATAATCTCTGATCTTCTCTGCTCCCAATTCAATCGAATCTCCAA TTTCCATATAACAGAATCACTTTTTCGTAACTGCGTTGCTTCAAAATCACTCACTCCAACACACTTTCTCTCTCTTTTTCGCTTTTGGACTTCGCTACTA ATTATAATAATCATATTTTTGAGTTCTTCTTCCAATTCAATTCAATTCAATAATAAAGCGATTATCTCTTATTTGAAGAAGTTTCCGTGTTCGAGATTTT GGATATATTGTTTAGAAAGCAGAAGAATGGTTACCGGGAACCTTTTTCATAATAGAAAGAATTCATGGCCTGCTCAGGAGTATATCAGTAAATCCACTTT AAACCTCCTTGATTTTGATGATGCAGCTCCACCTGAACAAGCTTGGAGAAGGAGATTAAACAGTCATGCCAATCTTCTTAAAGAATTTAGTGTCACTTTT ATGGAAGCTATCAAGATGGTTAAGTTAGGTGTACGCATGTGGTCGTATGTTAGAGAAGAGGCTTCTCATGGAAGGAAAGCACCTATAGATCCTTTCACTC GAGAAAGTTGCAAGCCATCTGCAACTCAAGGAGTTCCACTTGGAGGAATGGGAAGTGGCAGCATATCTAGGGGATTTAGGGGTGAGTTCCGGCAATGGCA AATAATTCCTGGTGTATGTGAACCTTCACCTGTCATGGCCAACCAGTTCTCTGTAAGCTCTCTTCTCCCACCTACTACTCCCGACCTCTGTTATATTCTC TAATTGTATAAATCGTGGATTTATTTTACTGGTTAACATGCTACAATTTCATGACATATTATAGTGCAACTTTAGAACTGAGTTGTATCAAATTATGATG TTAGTTTTGAACGTGTACACACACACATGCATGGCATCAATTTTGTACAAGGATCTCTCGCTGTAGCACTTTGCCTGTTTGTCAGTTGAAGGAATCTTAG TACCTCGGTAGATAGAAGGTCTATAAACTACCTGAAGAAGTTAGAAAAAATTTAAAGTAACAATAAAATGATTTCATATTTATTTAATTTAATTTTTGGG ACATGGTTTACTTGTTGGGATGAGATGTGAGTCAGAAAATGCTGAGCTCATGTTGTAAATTGCTTTCTTTTCTTCTGAATGTTTGTGTCATGTCCAAGAA TGTTGCAATTAAACAAGTGAAATATTTTTAGTTGTAATGACAAGAATCACAAAGTAATTGGGCAAAAAAAGTAAAGAATTTACATCTTAATTTGGAATAA ATCTGGAAAGTAAACATGCAATGTGAGGAGTCAGAGGGTTTCTCTACAAAAAGAAATAGAAGTTAGTCCATAGAAACTCTATGTATATTTAGCATCTTAA CTATATTGTGTTCATAATGGCTTTATACTTGGTGATATCCTTGAGCTATTGTCCAGAGAAAAACAAAAAAAACCCTTATATTCTTGCCACCTTTTCTTCT ACATCCTCATCCACACCTTATCTTCCTTTCTATTTCTTTGTCACTTCTATCTCTTCTCTTCCTATCTCTCTCTCATCCCTACACCTCCTACACCTCAAAA AGAGGTGTAGTTGTTATAAAAAGAGAATGAAAGTACTGAGCTTAGTTTCTAGTTTTGATAGTTGTTACAATTTCTACTTCATAAATAGTGGTCGTATATA TGGTTATTGGTTAAAATAAACATCTGTGGGTGTATTTTCCTCCTGTGTTCAACATATTTTTGGTGTATGTGTCTTTTTCTAGAGGAACCTATGGCCTTTC CCCCCGCCCAGTTAACGGGGAATGGTGTTTAATATTTATGTCCATTTGAACTGTCATTTACATTCAAATTATCTGTTTCATAAATCTGTTTTATACATTC ATTTACTTCTCTTGTTACAGATTTTTGTAAGTAGAGATGGAGGAAATAAAAGTTTTGCATCAGTTTTGGCTCCTGGCCAGCATGAAGGTTTAGGATCTCG CAAGAGAGCCGATGATCAAGGTATATCATCATGGGGATGGAATCTAAATGGCCAGCACTCAACTTACCATGCTTTGTTTCCAAGAGCTTGGACAATTTAT GATGGTGAGCCAGATCCAGAACTAAAAGTGTCATGCCGGCAGATATCCCCATTCATACCACATGATTATAGAGAAAGTAGCCTACCTGCTGCTGTTTTTG TTTATACGTTGGTAAATACTGGTAAGGAAAGAGCTAAAGTCAGCCTTCTATTTACTTGGGCGAATTCCATTGGTGGAAACTCACACTTGACAGGAGATCA TGTGAATGAACCGTTCATAGCTGAAGATGGAGTCTCTGGTGTACTTCTACATCACAAGCAAGTTATCAAACCTTATACCTATATGTGACGGTTGGTTTGC ATTTTTATCAGTAGTTGCTTTGCCTTCATGAAAGTAGGACAGCAAAAGGCAACCCTCCTGTTACTTTTGCAATAGCTGCATGTGAAACACAGAATGTTAG TGTTTCTGTTTTGCCATGTTTTGGGCTGACCGACGGAAGTAACATAACAGCGAAAGACATGTGGTGTAAAATGGTGCAGGATGGACAATTTGATCGGGAA AATTTTTCTTCTGGACCTAGCATGCCATCATCACCTGGAGAGACACTGTGTGCTGCTGTTTCAGCTTCAGCATGGGTGGAACCCCATGGAAAATGCACTG TTGCATTTAGTCTTGCATGGTCATCTCCGAAAGTGAAGTTCTCCAAAGGCAGCACATACCACAGGAGGTATACAAAATTTTATGGGGCTTCTGAGGGAGC AGCAGTGGACTTGGCCCATGATGCATTAACACATTACAAACGATGGGAAGAAGAGATTGAGAAATGGCAAAGTCCTGTTCTTAAGGATGAGAAACTACCA GAATGGTACAAGTTTACATTATTTAATGAACTCTACTTTCTCGTTGCTGGAGGAACAATTTGGATTGATTCTCCTCTGCTAGCTTCGAATATGGGAAACG ACCAGGGTCAGTCAAAAGAGTTGGAATGTTCAACTGTCAAAGTAACTGAAGTTAGAGTAGACTGCAGACAAGGTGCAGATGTCGAGTGTATGGAAGATAA CTCCTATGATTCTACCTCTATTAATGGACCAAATCTGGATGAACAAGATGTTGGATATGTTTCTGATGAAAATGAGTCAGTGATTTCTTTTAGAAAAGGG AACTCCACAAGTGCTCTGCACTCCTTAACAATGACGGACCAAGAATATGATAATGATGTTGGAAGGTTCTTGTACTTGGAAGGTGTTGAGTATGTCATGT GGTGCACATATGATGTACACTTCTATGCTTCATTTGCCCTTCTTGAGCTCTTTCCCAAGATTGAATTAAATATACAGCGTGATTTTGCTAAAGCTGTCTT GTGCGAAGATGGAAGAAAAGTAAAGTTTTTGGCAGAGGGAAACTGGGGAATTCGAAAGGTTAGAGGGGCTGTGCCACATGATTTGGGGACGCATGATCCA TGGCATGAAATGAATGCTTATAATATTCATGATACTAGCAAGTGGAAGGACTTGAATCCAAAATTTGTACTTCAGGTGTATCGAGATTTTGCTGCAACGG GTGATATGTCATTCGGAGTTGATGTTTGGCCTGCTGTTCGTACTGCAATGGAGTACATGGACCAATTTGATAGAGATAATGATGGTCTTATTGAGAATGA TGGGTTCCCTGATCAAACATATGATACATGGACAGTCCATGGTGTGAGTGCTTATTGTGGTTGTCTTTGGCTTGCTGCTCTTCAAGCTGCAGCTGCAATG GCCCTTCAACTAGGAGACAGGGATTTTGCAGAAACATGCAAAAGGAAGTATTTGAAGGCTAAACCAGCATTTGAAGAAAAACTATGGAACGGATCTTATT TTAACTATGACAGTGGATCAAGTGGTAATAGTAAATCCATTCAAGCGGATCAATTAGCTGGGCAGTGGTATACAGCATCCTCAGGTCTTCCCTCCCTTTT CGATGATTTCAAGATCAAAAGTGCTCTCCGGAAGGTTTACGATTTCAATGTCATGAAAGTTAAAGGAGGCAGGATGGGTGCTGTAAATGGCATGCATCCC AATGGTAAAGTGGACGAGACATGCATGCAATCTCGAGAAATATGGACCGGTGTGACCTATGGTGTTGCTGCTACAATGATCCTTGCTGGAATGGAAGATG AGGCCTTCACAACAGCTGAGGGTATATTTCTAGCAGGCTGGACAGAGGAAGGATACGGATACTGGTTTCAGACTCCAGAGGGATGGACAATGGATGGGCA CTACCGTTCACTGATATATATGAGGCCACTCTCAATTTGGGGCATGCAATATGCATTAACTCTCCCTAAGGCAATGCTTGAGGCCCCAAGAATTAACATC ATGGATAGAATCCACCTATCTCCTGTTAATGGAGGATTCTCTCATAATGAAACAGGTGTGAGAAAGATTGCAACAAAGTCAGGATGTTTTAGCAACACTA TGTTTCATTGTGCTTGCTGATTATTAAACTTGGAACCTTCAAATTTTTGTATAGGTAAATATAGTCACATTGTTCCTTAACCCTTTTTGAGAAGTCAAAG ATGGGTGTAGTTTTTTTCATTTTGGAACTAAGCAATGCTCGGCTGTAATTTATAGTCTGTTAATGTAAACAATGTAGGGCACATTTCACTATTATTGAAC ATTATTATTTAAGTTCTGAAGATGTGATATGTATTTGGCACATACCAATTTCTTAGTCATCATTTTTTGTTTATAGTAGGATAAATATGGAATGGTGGAT GGATGTGATGACTATTTTGACAATACTAATTGCGTGACAAAAGCTCTTGAGTGGTAAAAAAATGTTGCAAGAGCACCTGCT
• Tissue: flowers
• Gene name: LI_gene_80312;
• Additional information: details;

Expression of Ll_transcript_49940

FPKM

• FPAB: 32.8
• FPNAB: 8.7
• LF1: 3.7
• LF2: 6.3
• LF3: 6.8
• LF4: 4.8
• UF1: 3.4
• UF2: 6.4
• UF3: 6.1
• UF4: 6.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_49940

• Blastp: Non-lysosomal glucosylceramidase from Mus with 50.68% of identity
• Blastx: Non-lysosomal glucosylceramidase from Mus with 50.68% of identity
• Eggnog: Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (By similarity)(COG4354)
• Kegg: Link to kegg annotations (230101)
• CantataDB: Link to cantataDB annotations (CNT0001180)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461194.1)
• Pfam: beta-glucosidase 2, glycosyl-hydrolase family 116 N-term (PF12215.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;