Ll_transcript_50435

• Id Trinity: FTRINITY_DN58815_c2_g1_i14
• Name Transcript: Ll_transcript_50435
• Sequence: TTCCCGTTTCAGCACCATCCACCGCTTTTTTAAGAACAACTTAAAATTAAAAGCCGCAATCTATTCTTTCAATTTTCTGAATCTCATTGCCGCAACCAAT GTTGAAGCTTATTTTATCCTCCTCCGCCCACCGCCTTCCTCAGACGGTGGTTCCGACGCTACGACCCGCAACGCTGTCCACCTCGCCGTTGCATAAAGTG CTAGGTTCTCTCAGGGGAGGCAGGTTGTTTTTCTGTTCCGGTTCGGGTGACGGAGCTGATGCCGAAGCTAAAGTTGTCGAGTCAGGCTCGGGTGTCGAAG AGTCTCAAACAAAGGCTTCTTCTGCTATCGTTTCCACTAATCCTAGGCCCGAAGATTATCTCACTGTTTTGGCGTTACCATTGCTACACAGACCACTTTT CCCTGGATTTTACATGCCAATCTATGTTAAGGATCCGAAATTGTTGGCAGCTTTGCAGGAAAGTCGAGAACGACAAGCCCCTTATGCTGGTGCTTTCCTT CTCAAGGATGAGCCAGGGTCTGATCCTAGTGTAGTAACTGGCTCTGACACAGATAAAAATGTATACGATTTAAAAGGAAAAGAGTTGTTTAACCGCCTTC ATGAAGTTGGGACTCTTGCTCAAATTTCAAGCATCCATGGGGATCAGGTGATCCTGATTGGTCATCGGCGTTTACGTATAGCAGAGATGGTTAGTGAGGA TCCACTTACTGTAAAAGTTGATCATCTCAAGGATAAGGCTTATAACAAAGATGATGACATGATAAAGGCCACATCTTCTGAGGTTATATCAACCCTAAGG GATGTTCTTAAAACAAGTTCCCTTTGGAGAGATCATGTTCAGACCTACACTAAGCATATTGGTGATTTTACACCCCCAAGGATTGCAGATTTTGGAGCTG CAATATCTGGGGCAAACAAATTGCAATGCCAACAAGTCCTTGAAGAGCTAGATGTGTATAATCGATTAAAACTTACATTGGAGTTGGTAAAGAAAGAGAT GGAAATCAGCAAGATTCAGGAATCAATTGCAAAAGCAATTGAAGAAAAGATAAGTGGTGAGCAGCGCCGCTACTTGTTAAATGAGCAGCTTAAGGCCATA AAGAAGGAATTGGGACTGGAGACTGATGACAAAACAGCTCTCACTGGTAAATTCAGAGAAAGGATTGAACCAAAGAGAGAAAAATGCCCGCATCATGTTT TGCAAGTTATAGATGAAGAGCTCACAAAACTGCAGCTGCTGGAGGCTAGCTCTAGTGAATTCAGTGTTACCCGTAATTACTTGGACTGGTTGACTGCTCT GCCTTGGGGAGAATACAGTGATGAGAACTTTGATGTTACTCGGGCACAAAAGATTCTTGATGAAGATCATTATGGATTAACAGATGTGAAGGATAGGATA TTGGAGTTCATAGCTGTTGGGAAATTAAGAGGGACTTCACAAGGAAAGATTATCTGTCTTTCTGGTCCGCCAGGGGTGGGAAAAACAAGTATTGGCCGTT CAATTGCACGTGCGTTGAACCGGAAGTTCTTTCGATTCTCTGTAGGAGGTTTAGCTGATGTGGCTGAAATCAAGGGTCATCGTCGAACCTATATTGGCGC TATGCCAGGTAAGATGGTACAATGCCTTAAGAATGTGGGAACAGCCAACCCTCTTGTTTTGATTGATGAAATTGACAAGTTGGGAAGAGGACATGCTGGT GATCCAGCAAGTGCTTTGTTAGAGCTTCTAGATCCGGAGCAGAATGCTAATTTTCTAGACCACTATCTTGATGTTCCCATTGATCTATCAAA
• Tissue: flowers
• Gene name: LI_gene_80352;
• Additional information: details;

Expression of Ll_transcript_50435

FPKM

• FPAB: 3.5
• FPNAB: 6.1
• LF1: 8.2
• LF2: 6.4
• LF3: 4.8
• LF4: 4.5
• UF1: 5.7
• UF2: 7.9
• UF3: 3.6
• UF4: 2.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_50435

• Blastp: Lon protease homolog, mitochondrial from Zea with 79.31% of identity
• Blastx: Lon protease homolog, mitochondrial from Zea with 79.31% of identity
• Eggnog: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (By similarity)(COG0466)
• Kegg: Link to kegg annotations (732810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428611.1)
• Pfam: ATP-dependent protease La (LON) substrate-binding domain (PF02190.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;