Ll_transcript_50437

• Id Trinity: FTRINITY_DN58815_c2_g1_i16
• Name Transcript: Ll_transcript_50437
• Sequence: ATTATGAGTTGGCTCTTCCTCAAGATTCCAAGGTTCATAACGTTTTCCATGTGTCACTCTTGCGACAATACTTTGGTCCTTCACCACCAGTGACCACGGT GGTCCTTCCCACATCGAGTGCATCTGCTGCATCTCCGCTGGTCACAGTGGGTGACAAGGTTGGCCACCTTGCTACCTCGGTGTCTGCTAATGAAGAAGAC TCCGTTCAGATTGGACAGAACTTTATAGTGGGGAAGCAATCTGTAGTTGGTTTTTTTAATGGAAGAGAAAATGATGTTGAGGCTGTTGAACTTAGGGAGA GTGAGGAAGTAGAGGGTGAAATTCCTTTCACTAAAGGGCTCTCACGGTTCCGAGGACTTTGAATGAAGTGTTTAATGAGAGTGCAGAGTTTGAAGGTGAT TTACGGTTGGAAAGGGGTCCACGGTTTAATGACAAAGTGGGTCAAAAGACACTTAATGATTCTGAGTTATTGCAGGAGAGAGAGAGACTTAATGCTTCAC GTGGCTCTATGGATGGCTTTACACGGTTCCTACGCAAGCCCACCCCTGCCTGTCCATTAATTGCTAGCTCTGCACAGGGACCCACCTCTGTTCCCACGCC TGCTGCTTTTTCTCTGCCCAAGACCATCACACGCATTCCTTCTTCCCAGGCTGTATCTCCACCATTCATTGCTGCCAGTTGTCCTTCACTAAAAAAAAAG GAGCCGTTGGGTGTTGAGTCTCCCACGCAACCACACCAGCTAGCACACGGTTTTGAGAAACCGGTACAGAAGGTGGATTTGGGAGCACACGGTTTTGAGA AACCGGTTCAAACGGTGACTTTGGGACACACTATGCCATTTGCTTTGGACAGTCCACCTGGGCCTTTATTTTCTGCTGGATCCGGAAGTGATCAGCCCAA CCTTGAGGTCAAGGTTCCTTTTCAAGGATTGGGCAATGATGGGCTGACCGAATATCACAAGCCCAAGAGGGTGACCCAACCATCTAAGAAGCTCCAGGAT TACATATGGAAAGGAATATAAATAATTAGTGTTATTTGCTATTATGTTTTCTCTTCATTTCTGAATTTACTGTTGCAATTATGGGCTTCAGCTTTTGGCC CAATATGTTCAGTTGTAATCACCTACTTAAGGTGTGACTTTCCTTTTATCAATATGATGAATATTTCAGATATTTTCTTTCTTCTTCTTGCAGTTTCACT CCTAACAAATACTTTCAAATTTCAATGATAGATTTAACAACTATGTTTCAAATTAGAGCCCGTTTGTTAAGTTTTTCTTTCTTCCTTAAAAGCACACCTT TTTATTACACTTGTGAATTGTGATGTTTATAAGCTTGTTTGGTTGGGTTTCACTTAAAGCCTTTATTATTTTTTTCTTAAAAGAATGTTATTTTATTTAT TAAAAAATCACTTGTGAATTGTAATGTTTATAAGCTTGTTTGGTTGGGCTTTACTGATAACCTTTTTTTTGAAATAAGCTGAAATTTAGAACCTGTTTGT TTTACGTTCTTACCAAACATTTTTGGGAAATCACTTTTTTGAGAATCCTTAGAAAACAGGTTTTTAATCTTACAGCTTGTATGGCTATACAGTCCAAATG TTAATGTTATGTGCTTATTGTATCGAGTGTAGTAGAATCTCGTAGTATGCAAGAATCTCTCCAAATGGAGTGTTTTAGATAAGATGTTCATATCCTATTG GTGTTTGCCCCCCACCCCCCACCCACCCATTGCTTTGATGTGATTTTGTTGGAAATGTTGGCTGTTCTTGGAGAATGACTATCTTTCTTGATTGCTTATA ACATAAGTATTCTTAATATTGGTGTTTTCTCCTTTACTTTGAAACAGGTTTTGGCGTTACCATTGCCACACAGACCACTTTTCCCTGGATTTTACATGCC AATCTATGTTAAGGATCCGAAATTGTTGGCAGCTTTGCAGGAAAGTCGAGAACGACATGCCCCTTATGCCGGTGCTTTCCTCCTTAAGGATGAGCCAGGG TCTGATCCTAGTGTAGTAACTGGCTCTGAGACAGATAAAAATGTATATGATTTAAAAGGAAAAGAGTTGTTTAACCGCCTTCATGAAGTTGGGACTCTTG CTCAAATTTCAAGCATCCATGGGGATCAGGTGATCCTGATTGGTCATCGGCGTCTGCGCATAACAGAGATGGTTAGTGAGGATCCACTTACTGTAAAAGT TGATCATCTTAAGGACAACGCGTTTAACAGAGATGATGACATTATAAAGGCCACATATTGTGAGGTTATATCAACCCTAAGGGATGTTCTTAAAACAAGT TCCCTTTGGAGAGATCATGTTCAGACCTACACTAAGCATATTGGTGATTTTACCATTCCAAGGCTTGCAGATTTTGGAGCTGCAATATCTGGGGCAAACA AACTGCAATTACAACAAGTCCTTGAAGAGCTAGATGTGTATAATCGATTAAAACTTACATTGGAGTTGGTAAAGAAAGAGATGGAAATCAGCAAGATTCA GGAATCAATTGCAAAAGCAATTGAAGAAAAAATAAGTGGTGAGCAGCGCCGTTATTTGTTAAATGAGCAGCTTAAGGCCATAAAGAAGGTACAAAGCCCT CATGATTTGGTTACATCCGCGTGCCTTGAATTCTAGACATGTTTGTATTTTTCTCAAATCAACCAGATTTTCCACATCCGAGATTGGTTCATTACATTTC ATCACATCAGAGATTGAACATATCTGTTACATTATTAGTTATTACTTCGTTCTTACCAAGTCTTGGATTTCAGAATAACTTTCATGTCCCATTAAAGGAA TACTCCTAATGACCATATCTTTTTAGTGGGCTTTATCCTGAGGTGAAGAAAGTTTAGGTGTCGACCTAGGTCTTTGATCTTTCTGGTGTCATTTCCTTTA TCCTAATCAGTGCAATTATATGTATGTCATACTTTCCTGAATTTTCTACTATTCTAGTTGGTCTTAAATTTATTTTCTATTTGCAGGAATTAGGACTGGA GACTGATGACAAAACTGCTCTCACTGGTTGGTTCTGATCTACGATAGTCGTATATTTCTTTTTATAACTCATTTCCCAAAGGATAGATCTAATATGCATG CATGTAGGAAAGGTCGTTGTAGAACCTACAACCATGTGATTAAAGTCTGTGTTACTAAACATTGTTTACCTAACTGGTTGTTTTCTTCTTCAAATATTTT GACTACATAGTGAGCATGTAAATATTCTTTATATCATACGTTTTCTATGTATCCAGTGGTCTGTGTTTATTGTCACATGATCGAATTTGCGTTATATAGC TTCCATCCATTAGTTCACGAAGTGAAATGGTGGTTGGGGTATTTTCTGGTGAAATTTGTCGCTATCATTACATTAACTTTACTTTTCAGGTAAGTTCAGA GAAAGAATTGAACCAAAGAGAGAGAAATGCCCGCCTCATGTTTTACAAGTTATAGATGAAGAGCTGACTAAACTGCAGCTGTTGGAGGCTAGTTCTAGTG AATTCAGTGTTACCCGTAACTACTTGGACTGGCTGACTGCACTGCCTTGGGGAGAATACAGTGATGAGAATTTTGATGTTACTCGAGCACAAATGATTCT TGATGAAGACCATTATGGATTAACGGATGTGAAGGATAGGATATTGGAATTCATAGCTGTTGGGAAATTAAGAGGGACTTCACAAGGAAAAGTTATCTGT CTTTCTGGTCCACCTGGGGTGGGCAAAACAAGTATTGGCCGTTCAATTGCACGTGCCTTGAACCGGAAGTTCTTTAGATTCTCTGTAGGAGGATTAGCTG ATGTGGCTGAAATCAAGGGTCATCGTCGAACCTATATTGGTGCTATGCCAGGGAAGATGGTACAATGCCTTAAGAACGTGGGAACAGCCAACCCTCTTGT TTTGATTGATGAAATTGACAAGTTGGGCAGAGGACATGCTGGTGATCCAGCAAGTGCTTTGTTAGAGCTTCTAGATCCGGAGCAGAATGCTAATTTTCTG GACCACTATCTGGATGTTCCCATTGATCTATCAAAGGTTCTCTTTGTTTGTACTGCAAATGTAGTGGAGATGATTCCCAATCCTCTATTGGATAGGATGG AGGTTGTTTCTATTGCTGGGTATATTACTGATGAGAAAATGCACATTGCAAGAGACTATCTGGAGAAGAGTACACGTGAAGCATGCGGAATAAAGCCTGA ACAAGTGGAAATGACCAATGCTGCTCTTCTTTCCCTAATAGAAAATTACTGCCGAGAAGCTGGGGTCCGGAATCTCCAAAAGCATATAGAAAAAATTTAT CGAAAGATAGCACTACAACTCGTGAGGCAAGGGGAGACAATTGATGCTACAATTGCTAGTGCTCAGTCTATTGAACCTAAGAATGCCAAAGTTGATTTTG ATGAATCAGTTCAAAGGGATGAAACCTCTGAAGAGGATGACAAGGTACAAATAGATCTCCCAGCTGAGCAATCTCCATGTCCTGACAATCAATCTACAGA TAATGAGGTTGCAAAAAAAGGTGAGGAAGATAAGGAAACTGAAACAAAGACAATAGAGAAAGTCTTGATTGATAAATCAAATTTAGGTGACTATGTTGGA AAGCCTGTCTTCCATGCTGACCGCATCTATGATCGGACGCCTACCGGGGTTGTTATGGGTCTTGCCTGGACTTCAATGGGTGGTTCCACTCTGTATATAG AGACCACACTCGTTGAGGAAGGGGAAGGAAAAGGAGCATTGCATGTCACTGGTCAATTAGGAGATGTGATGAAAGAAAGTACTCAGATAGCTCACACAGT TGCCAGAGCAATACTGCTGGAGAAGGAACCAGAAAATCCCTTCTTTGCAAATTCAAAGTTACACCTCCATGTTCCTGCAGGGGCTACACCAAAGGATGGA CCTAGTGCTGGCTGCACGATGACCACATCATTGTTGTCCCTTGCCATGAAGAAGCCTGTGAAGAAGGATCTAGCAATGACCGGGGAAGTGACACTTACTG GCAAAGTTCTTCCTATTGGCGGGGTTAAGGAGAAAACCATAGCCGCGAGAAGGAGTGAAGTTAAGACTATTATATTCCCTTCTGCTAACAGGAGAGATTT TGATGAACTGGCACCTAATGTCAAGGAAGGTCTTGATGTTCATTTTGTTGATGACTACAGACAGATCTTTGATTTGGCTTTTGGTGATGAACTGTCTCAG AATGTAGAGAACTAAGTCTGCAGAATCTTCATTCTTTCTTCATCCTGGACCTGAGTTTTGTACTTTATTGATTTAGTACCAATGGTTTTGGGAGTTTTTA TTCATCTCTGAGGCAAAGTATCATTTTCTTTCTCAGAGTGGCTTATCTAATTGTAATAATATGTACATTTATTTGTATTTGAGGGAATGCTATTTAATAT TTTATTTTTATCAAGGTGGGACTATTCATACTAAACATTCTAATACAATAATCGGTCCATTAGTTGGGGTAGGCTACTTAAACATTCTCATATTTGCAAT AAAACAATTACTTTTCAGATTTATCTTTTGGGTATGAATTGAAAATTTAAGCAGTTGTATTCTTT
• Tissue: flowers
• Gene name: LI_gene_80352;
• Additional information: details;

Expression of Ll_transcript_50437

FPKM

• FPAB: 0.3
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0
• LF3: 0.2
• LF4: 0.1
• UF1: 0
• UF2: 0.2
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_50437

• Blastp: Lon protease homolog 1, mitochondrial from Arabidopsis with 78.38% of identity
• Blastx: Lon protease homolog 1, mitochondrial from Arabidopsis with 78.44% of identity
• Eggnog: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (By similarity)(COG0466)
• Kegg: Link to kegg annotations (AT5G26860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428610.1)
• Pfam: Holliday junction DNA helicase ruvB N-terminus (PF05496.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;