Ll_transcript_50427

• Id Trinity: FTRINITY_DN58815_c2_g1_i7
• Name Transcript: Ll_transcript_50427
• Sequence: ATTATGAGTTGGCTCTTCCTCAAGATTCCAAGGTTCATAACGTTTTCCATGTGTCACTCTTGCGACAATACTTTGGTCCTTCACCACCAGTGACCACGGT GGTCCTTCCCACATCGAGTGCATCTGCTGCATCTCCGCTGGTCACAGTGGGTGACAAGGTTGGCCACCTTGCTACCTCGGTGTCTGCTAATGAAGAAGAC TCCGTTCAGATTGGACAGAACTTTATAGTGGGGAAGCAATCTGTAGTTGGTTTTTTTAATGGAAGAGAAAATGATGTTGAGGCTGTTGAACTTAGGGAGA GTGAGGAAGTAGAGGGTGAAATTCCTTTCACTAAAGGGCTCTCACGGTTCCGAGGACTTTGAATGAAGTGTTTAATGAGAGTGCAGAGTTTGAAGGTGAT TTACGGTTGGAAAGGGGTCCACGGTTTAATGACAAAGTGGGTCAAAAGACACTTAATGATTCTGAGTTATTGCAGGAGAGAGAGAGACTTAATGCTTCAC GTGGCTCTATGGATGGCTTTACACGGTTCCTACGCAAGCCCACCCCTGCCTGTCCATTAATTGCTAGCTCTGCACAGGGACCCACCTCTGTTCCCACGCC TGCTGCTTTTTCTCTGCCCAAGACCATCACACGCATTCCTTCTTCCCAGGCTGTATCTCCACCATTCATTGCTGCCAGTTGTCCTTCACTAAAAAAAAAG GAGCCGTTGGGTGTTGAGTCTCCCACGCAACCACACCAGCTAGCACACGGTTTTGAGAAACCGGTACAGAAGGTGGATTTGGGAGCACACGGTTTTGAGA AACCGGTTCAAACGGTGACTTTGGGACACACTATGCCATTTGCTTTGGACAGTCCACCTGGGCCTTTATTTTCTGCTGGATCCGGAAGTGATCAGCCCAA CCTTGAGGTCAAGGTTCCTTTTCAAGGATTGGGCAATGATGGGCTGACCGAATATCACAAGCCCAAGAGGGTGACCCAACCATCTAAGAAGCTCCAGGAT TACATATGGAAAGGAATATAAATAATTAGTGTTATTTGCTATTATGTTTTCTCTTCATTTCTGAATTTACTGTTGCAATTATGGGCTTCAGCTTTTGGCC CAATATGTTCAGTTGTAATCACCTACTTAAGGTGTGACTTTCCTTTTATCAATATGATGAATATTTCAGATATTTTCTTTCTTCTTCTTGCAGTTTCACT CCTAACAAATACTTTCAAATTTCAATGATAGATTTAACAACTATGTTTCAAATTAGAGCCCGTTTGTTAAGTTTTTCTTTCTTCCTTAAAAGCACACCTT TTTATTACACTTGTGAATTGTGATGTTTATAAGCTTGTTTGGTTGGGTTTCACTTAAAGCCTTTATTATTTTTTTCTTAAAAGAATGTTATTTTATTTAT TAAAAAATCACTTGTGAATTGTAATGTTTATAAGCTTGTTTGGTTGGGCTTTACTGATAACCTTTTTTTTGAAATAAGCTGAAATTTAGAACCTGTTTGT TTTACGTTCTTACCAAACATTTTTGGGAAATCACTTTTTTGAGAATCCTTAGAAAACAGGTTTTTAATCTTACAGCTTGTATGGCTATACAGTCCAAATG TTAATGTTATGTGCTTATTGTATCGAGTGTAGTAGAATCTCGTAGTATGCAAGAATCTCTCCAAATGGAGTGTTTTAGATAAGATGTTCATATCCTATTG GTGTTTGCCCCCCACCCCCCACCCACCCATTGCTTTGATGTGATTTTGTTGGAAATGTTGGCTGTTCTTGGAGAATGACTATCTTTCTTGATTGCTTATA ACATAAGTATTCTTAATATTGGTGTTTTCTCCTTTACTTTGAAACAGGTTTTGGCGTTACCATTGCCACACAGACCACTTTTCCCTGGATTTTACATGCC AATCTATGTTAAGGATCCGAAATTGTTGGCAGCTTTGCAGGAAAGTCGAGAACGACATGCCCCTTATGCCGGTGCTTTCCTCCTTAAGGATGAGCCAGGG TCTGATCCTAGTGTAGTAACTGGCTCTGAGACAGATAAAAATGTATATGATTTAAAAGGAAAAGAGTTGTTTAACCGCCTTCATGAAGTTGGGACTCTTG CTCAAATTTCAAGCATCCATGGGGATCAGGTGATCCTGATTGGTCATCGGCGTCTGCGCATAACAGAGATGGTTAGTGAGGATCCACTTACTGTAAAAGT TGATCATCTTAAGGACAACGCGTTTAACAGAGATGATGACATTATAAAGGCCACATATTGTGAGGTTATATCAACCCTAAGGGATGTTCTTAAAACAAGT TCCCTTTGGAGAGATCATGTTCAGACCTACACTAAGCATATTGGTGATTTTACCATTCCAAGGCTTGCAGATTTTGGAGCTGCAATATCTGGGGCAAACA AACTGCAATTACAACAAGTCCTTGAAGAGCTAGATGTGTATAATCGATTAAAACTTACATTGGAGTTGGTAAAGAAAGAGATGGAAATCAGCAAGATTCA GGAATCAATTGCAAAAGCAATTGAAGAAAAAATAAGTGGTGAGCAGCGCCGTTATTTGTTAAATGAGCAGCTTAAGGCCATAAAGAAGGAATTAGGACTG GAGACTGATGACAAAACTGCTCTCACTGGTTGGTTCTGATCTACGATAGTCGTATATTTCTTTTTATAACTCATTTCCCAAAGGATAGATCTAATATGCA TGCATGTAGGAAAGGTCGTTGTAGAACCTACAACCATGTGATTAAAGTCTGTGTTACTAAACATTGTTTACCTAACTGGTTGTTTTCTTCTTCAAATATT TTGACTACATAGTGAGCATGTAAATATTCTTTATATCATACGTTTTCTATGTATCCAGTGGTCTGTGTTTATTGTCACATGATCGAATTTGCGTTATATA GCTTCCATCCATTAGTTCACGAAGTGAAATGGTGGTTGGGGTATTTTCTGGTGAAATTTGTCGCTATCATTACATTAACTTTACTTTTCAGGTAAGTTCA GAGAAAGAATTGAACCAAAGAGAGAGAAATGCCCGCCTCATGTTTTACAAGTTATAGATGAAGAGCTGACTAAACTGCAGCTGTTGGAGGCTAGTTCTAG TGAATTCAGTGTTACCCGTAACTACTTGGACTGGCTGACTGCACTGCCTTGGGGAGAATACAGTGATGAGAATTTTGATGTTACTCGAGCACAAATGATT CTTGATGAAGACCATTATGGATTAACGGATGTGAAGGATAGGATATTGGAATTCATAGCTGTTGGGAAATTAAGAGGGACTTCACAAGGAAAAGTTATCT GTCTTTCTGGTCCACCTGGGGTGGGCAAAACAAGTATTGGCCGTTCAATTGCACGTGCCTTGAACCGGAAGTTCTTTAGATTCTCTGTAGGAGGATTAGC TGATGTGGCTGAAATCAAGGGTCATCGTCGAACCTATATTGGTGCTATGCCAGGGAAGATGGTACAATGCCTTAAGAACGTGGGAACAGCCAACCCTCTT GTTTTGATTGATGAAATTGACAAGTTGGGCAGAGGACATGCTGGTGATCCAGCAAGTGCTTTGTTAGAGCTTCTAGATCCGGAGCAGAATGCTAATTTTC TGGACCACTATCTGGATGTTCCCATTGATCTATCAAAGGTTCTCTTTGTTTGTACTGCAAATGTAGTGGAGATGATTCCCAATCCTCTATTGGATAGGAT GGAGGTTGTTTCTATTGCTGGGTATATTACTGATGAGAAAATGCACATTGCAAGAGACTATCTGGAGAAGAGTACACGTGAAGCATGCGGAATAAAGCCT GAACAAGTGGAAGTGACCAATGCTGCTCTTCTTGCTCTAATAGAAAATTACTGCCGAGAAGCAGGGGTACGAAATCTCCAAAAGCACATAGAGAAAATTT ATCGAAAGATAGCACTACAACTCGTGAGGCAAGGGGAGACAATTGATGCTATAATCGCTAGTTCTCAGTATATTGAACCTAAGAATGCCAAAGTAGATGT TGATGAATCAGGTCAAAATACAATTAAAAAAGAAAACTTGTTAGGGAGTAGTAATCCTGAACAAGTCGGTGGAACCTCTGAAGATGACAAGTTGCAATTA GATCTACCAGCTGAGGAATCTCTATGTCCTGACAATCAATCTACAGATAATGAGGTTGCAAAAGAAACAGAGGAAGATAAGGAAACTGGAACAGTGACAA TAGAGAAAGTCTTGATTGATAAATCAAATTTAAATGACTATGTTGGAAAGCCTGTCTTCCATGCTGATCGCATCTATGATCGGACTCCCACCGGGGTTGT TATGGGCCTTGCCTGGACTTCAATGGGTGGTTCCATTTTGTATATAGAGACCACACTCGTTGAGGAAGGGGAGGGAAAAGGAGCACTGCATGTCACTGGT CAATTAGGAGATGTGATGAAAGAAAGTACTCAGATAGCTCACACAGTTGCCAGAGCAATACTACTGGAGAAGGAACCAGAAAATCCTTTCTTTGCAAATT CAAAGTTACACCTCCATGTTCCCACAGGGGCTACACCAAAGGATGGACCAAGTGCTGGTTGCACCATGACCACTTCACTGCTGTCCCTTGCCATGAAGAA GCCTGTAAAGAAGGATCTAGCAATGACTGGGGAAGTGACACTTACAGGGAAAATTCTTCCCATTGGCGGGGTTAAGGAGAAAACCATAGAGGCGAGAAGG AGTGAAGTCAAGACTATTGTATTCCCTTCGGCTAACCGGAGAGATTTTGATGAGCTAGCACCTAATGTGAAGGAAGGTCTTGATGTTCATTTTGTTGATG AATACAGCCAGATATTTGATTTGGCTTTTGGTGATGAACCCTCTCAGAATATAGAGAAATAAGTCTGCAGGATCCTGAGATGAAACTCAATTCTTTCTTG AGCTTTTGGAAGTTTTTATTCAGCTCGAGGCAAAGTATCATTTCTTTATCAGAGTGGCCTATCCAATTGTAATAAGATGTATATTTATATGTGAAGGAAT GCTAATTAATTTGTTTGTTTTCACTAACCTGGGGGAGTATTATTGTTTGCGTAGTTTGCAACAATTATATCAGGTACGAGATAGTCTTTACTGGCTGAGT TACGACCAGGTCGCTCTCCTTAAGACGTTTCGTGGTACTGCTAAAATTGTGCAAGCAGACTATCAACCACACCGTCCCCAGAATAAAACAATCCAGCG
• Tissue: flowers
• Gene name: LI_gene_80352;
• Additional information: details;

Expression of Ll_transcript_50427

FPKM

• FPAB: 10.1
• FPNAB: 6.9
• LF1: 7.6
• LF2: 11.3
• LF3: 11.8
• LF4: 10.6
• UF1: 7.8
• UF2: 10.8
• UF3: 12.2
• UF4: 9.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_50427

• Blastp: Lon protease homolog, mitochondrial from Oryza sativa with 74.09% of identity
• Blastx: Lon protease homolog, mitochondrial from Oryza sativa with 75.08% of identity
• Eggnog: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (By similarity)(COG0466)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452276.1)
• Pfam: Holliday junction DNA helicase ruvB N-terminus (PF05496.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;