| Id Trinity | FTRINITY_DN58817_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_51218 |
| Sequence | CTCCTCTATAAAGGAGGTCCCAAGTTAATGGTTGTAAGTGAAGTAGCCACCTTTTAGATTCCACATTATCTCTTTAAGTTGGAATATTTGAGTAGTGAGT GAGCATTGAAAAATGGAGAAGATTAATCTAGAAATCAAAGCTGAAGAGGCTCATAATGTTGAGATGAAATGGGTTCATGATTCTTCAGTTGATTACAAAG GCAGTGTTCCACTTCGAGCCTCAACTGGTTCTTGGAAAGCTTCTATCTTCATTGTTGCTATTGAATTCAGTGAGAGGTTAAGTTACTTTGGAATAGCAAC TAGCTTGGTTCTTTACCTCACAAAGGTTATGCATCAAGATCTGAAAACAGCAGCTAGGAATGTGAATTATTGGTCTGGTGTTACCACTTTGATGCCATTG CTTGGAGGATTCATAGCTGATGCATACTTGGGTCGTTACTCCACTGTCTTTGCTTCATGCATTGTTTATCTCATGGGTTTGGTTCTCCTTACTATGTCAT GGTTCTTACCAAGCTTAAGGCCATGTGATAATCCCAACATGTGCACCAAGCCTAGGAAAATTCATGAAGTTGTTTTCTTCCTAGCCATCTACTTAATATC TGTGGGAACAGGAGGGCACAAACCTTCATTAGAAAGCTTTGGAGCTGATCAATTTGATGATAATCATGAAGAAGAAAGAAGGCAAAAAATGTCATTCTTC AATTGGTGGAGTTGTTCCCTATGCAGTGGACTTATTGTAGGAGTGACCCTTATTGTTTATATACAAGATAACATAAATTGGGGTGTTGCTGATATTATAT TCACAGGAGTTATGGCTTTTTCATTGCTTATTTTCATAGTTGGAAGGCCATTTTATAGGTATTTGGCACCACTTGGTAGTCCTTTAACTCCAATGTTGCA TGTTCTTGTTGCTGCTATTTCCAAAAGAAACCTTCCATATCCTTCAGATTCTGCTCAATTGTATGAAATTCCTGAGTCTCACTGCAATGGAAGATTCCTG TGTCACACAAACAAAATCAAGTTGTGGACTTGCAAGTTTTTCTTGCACCTCGTATTACTTAAAAGCCTTTGGTTCCAAGTTGTCCTTGCTTTGCCAACAT CTATGTCTCCCTCATGGAAAAGCCACATGTTGACTTTGGGCTAAAGCTTGTAGGGGCTGATCTTATGTCTATTCCTGGTGTCTACAGGTTTGTTCAGGTA TAGGACAATGTCTTTTTGATCTGATTTATTTATTTTCCCCGTTTTTCTTATCTTAATGTTTGAGTCTTAAAGTTGCTTACATTCATCTTTTACTGTTAAG GGGAAGTAGTCACTGCCTTGCATAATAGACCGTCTCCCCTTTGGTAAAAATGAACCAACGCCTGCTCAGGCAAATCTTATTTTGAAATATGTGATCTTCT CAATGCATCCCATTGATTTGTTTATGTATAAAGTATCTTCTTGCCTGCTTGGATGAGAGAACTATCATGGAACTAGTTCTGGATCAAACTAGAGTTACTA TTTGCATGTAATGGATAGGAATTTGATGGCTTGAGAAGTAAGAACCGCTTTCTTTCTATCCTCCTCTAAGCCATGTTAGTAATTGAATGACTTATATATT GTCGATGATACTATTAACAAAAATAGAGATCTGTGTTGAATGGTTTGTGGGCTTGTTACTGTTCATTGAGGGTAAAATTGTAGGTTCTTGTAGATGAATA TAGACTTAAAGTGACGTGTGGTGCCAGAAGGGTGCTGTTACCCTTTGTAATCTGGTATTTTTGAAATTAGCCATACAGTAGCTGTATTGATTATAAGGGA AAATTTGATTTGATTGGACACATCTGCTGGGTTGAAAGATTTTGATGGTCATATTAATTGCTTTCCATTCTATCATTTATACTGTTCTCTCTTAAGTTTT ATCATAAAGAACAAAGTTAAATTAGAAAAGGGAAAATCAGTTATAATATTGTGGCACATATATCACATATTCTTTGGTCTGGGGACATTTGCGGTTTGTG GCTCATAGTGAAGATACAAAAAATATCCTTTATAGCATATCACTGCTCTTGGCATTGTCCTTTATTAGTACCTCATTGAAAGATTTGTGGTTTTTAAACT AATCTGAAGTGTGATGTTTTCAGGATCTTATCAAAGAGCAGGTTGCAAACATGTATCTATGGCCCAAATCCCTGGAAGTTCAAATAGTAGATCCAACAAA GTATGTTTCTGGATTTTTCTAAATTATTTGTTACGATGGTACTTTAATTGTAACACCTCTGTTTTTCTTTTAAATGCTATTGGGAACCTCAGAGCCATGA GGAGGCCTGTTGGAATTTTACACGTGAAAGTTCTGAGAGCAATGAAGTTAAAGAAGAAAGATCTTCTTGGTGCATCTGACCCTTATGTGAAGCTAAAGAT GAGTGATGATAAGATGCCGTCGAAAAAGACTACTGTCAAGCACAAGAACTTGAATCCTGAATGGAAGGAGGAATTTAATTTGGTTGTCAAAGATCCCGAG TCCCAGGTTTTAGAGATTAATGTTTATGACTGGGAGCAGGTTGGGAAGCATGACAAAATGGGTATGAATGTGATCTCTTTGAAAGACGTCCCCCCTGAAG AGCCTAAAGAATTTACTCTTGCCCTCCTAAAAAATATGGATTCTAATGATGTCCAAAACGAGAAGTCACGTGGGGAGGTTGTTGTAGAATTGACATATAA ACCCTTCAAGGAGGATGAGTTGGACAAGGGTTTTGAAGAGACACAGGCAGTACAAAAAGCTCCGGAAGGTACTCCTGCTGGTGGAGGTCTGCTTGTAGTT ATACTCCATGAAGCTCAAGATGTTGAAGGGAAGTACCACACTAATCCATATGCCCGGGTTACTTTCAGCGGGGAGGAGAAGAAGACTAAGCGTATTAAAA AGAACAGAGATCCAAGATGGGATGAAGAATTCCAATTTACGTTGGAGGAACCTCCCACTAACCAAAGGTTACATGTGGAGGTTATCAGCACTTCATCAAG AAACCTGCTTCATCAAAAGGAATCATTGGGTTATATCGACATAAGTCTGGCAGATGTTGTTTCTAACAAGAGAATCAATGAGAAGTTTCATCTTATTGAT TCCAAGAATGGGCGCATCCAGGTAGAGTTGCAATGGAGAACTTCATAAGCACCATCACAAATTATTCTTCATACTTGTGTTTCCTTTTTATTTGTCAATC ATGTACAAGCTTCTAATAAAAATTGTTGAAAATATATAAACTATATGAATGATTAATGATGTGTATTTATTTTGGTATGCCTCTTTCCTTCCCTCACTTG TATCTTTATTTTCTTATTGTAACTTAGTGGTATTTCTAGCATCTTTGGCTTTTAACATAAGCACTCAAGAATTCACTGGTGCATTTTGGAGGGAATAATA AAAGGATTTGCATATTTTATCCAAAAAACATTATTTTTGAGATAAAAATAGTAAATGAAAGATGGATATAATTTTGTTTGTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80364; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_51218
| Blastp | Synaptotagmin-2 from Arabidopsis with 69.47% of identity |
|---|---|
| Blastx | Protein NRT1/ PTR FAMILY 5.6 from Arabidopsis with 65.25% of identity |
| Eggnog | Domain-Containing protein(COG5038) |
| Kegg | Link to kegg annotations (AT1G20080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450261.1) |
| Pfam | C2 domain (PF00168.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |