| Id Trinity | FTRINITY_DN58820_c2_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_51681 |
| Sequence | CCAAAGACCAAAAAAAATACTTGTTTTTGTTGTTGCTTTTCTCTCACTTTGCCACCCCATTAAGAAAAATCAATCCTTTCTCTCTTTCCACACTTCTCCC CTCTCTCTCTCTCTCTCTCTCTTACTCTTCTCCATGTTTCTTCATTCAATCACTTAGTTACTATTGCAATCCTCCATGTTTCTTATCTCTACCAAGAGGT TTATTCATATTTTTTGAAATACCATAATTTAATATTACACTTACCCCTAAGTAAAATGTAAAATGTAAAATGTTATAAAAATGAAAATGTAGTAAAGTCC TATAAAAAAGAGTAATAATGAGGATTGATGAACCTTGGTGACTGGGATACATATCTCATTTTTATGTGTATGTCAACATTACTGGTGTATCTCACCGGTT CATTTATGAGCCTAGTTTTCTTAAAATAATCAAACACGAATAGTAATATTGTACACCTTTGCTTAGTTCTTACTCTACTTTATTTCTTTGAATCTCACTA CTATCTAGTTCTACTCTTTTCTTGATCTCAATCTCAGTTGACTTCTGCTCTCTTTATTCATTGGGGTGAAAGCTAAATAGGCTTCATTCTTTTCTATGCA TTGTCAAAACTATCAGATGCAGTTGGAAGGAATATAAATATAAATATGGATATTTGTGATGTTTATTGAATGACAAGATAACGTTGGACAGGTTGGTGCA TCCCAGGAATTATAACACTTTGTACTTGTGTTTTTTTAGAGATTTGGTCCTTATATTTCAATTTGACCGTGTAAAATTGTATCTGGCATTAGTTTAGGTT GTTGAGTAGTACAACACTGCAAATTGTTCCCTTTAAAAAATATTTTTAAGCTTTTCTGGGGATACAATTTGTAGAATTAGTCATTCACCAAGATGTCAAA ATTCGAGGGTGTTATTGTCTCGGATCAATGGCTTCATAGCCAGTTTACGCAGGTCGAACTTCGCAGCCTCAAATCCAAATTTGTCTCTTTAAAGAATCAG AATGGTAAAGTTACATATGGTGATTTGCCACCTTTGATGGTGAAACTAAAGGAATTCAGAGACACATACAATGAGGATGAGATTAGAGTTATCTTGGGAG AGTCAGATGCTAACGTGACCGATGATATTGATTTTGAAGCCTTCTTAAGGGCATATTTGAATTTGCAAAACCAAGCTACGGTGAAACAAGGCGGTAGAAG GCACTCTTCATCATTCCTTAAGGATAGCATAACTACCCTTCTTCATACAATCAGTGATTCAGAACAAGCTTGTTATGTTGCCCACATAAACAGCTACCTT GGTGACGATCCATTTCTGAGTCAATTTCTTCCCCTGGACCCGGCTACAAATGATCTTTTCGATCTTGCAAAGGATGGCGTTCTTCTGTGTAAGCTTATCA ATGTTGCTGTGCCTGGGACGATAGATGAACGAGCCATCAACGCCAAACAAAATCTCAGTCTTTGGCAGAAGAATGACAACCATAATTTATGCCTCAATTC TGCCAAAGCTATTGGCTGCACAGTGGTTAACATTGGTGCGCAAGACTTACTTGAAGGAAGACCTCATCTTGTTCTAGGGTTGATTTCCCAAATCATAAAG ATCCAACTCTTGGCAGATCTCAACCTTAAGAAGACACCCCAGCTTGTGGAATTGGTTGATGACAGCCAGGATATTGAAGAGCTTCTTAGTTTGTCCCCTG AAAAGGTCCTACTAAAATGGATGAATTTTCATATCAAGAGAGGGGGTTACCAGAAAACTGTCAAAAACTTTTCTTCTGATGTTAAGGTATGTTGGCACTT CTTTAGAACATTTAATGATGAAACAATGATGCTTTATATTGGATTAACTAGTATATGATTTTTTTGTAACTATACCTGTATACCTGGAGCACAACTAGTT GAGGATAAGTGTAATTCGAGGAGTTTAAACTTGCATAGAAGAGATATAGTGTAAAATGTCATGGAAGAGGTATAATGTAAAGAATTGACTTTCTGCTTAC TACATATAAAAGGATGGAGAGGCTTATGCTTATCTGCTTAATGTCCTTGCTCCTGAGCATAGCAGTCCAGCAACCCTGGACACCAAGGACGCCTATGAAA GGGCAAATCTGGTTCTTGACCATGCAGAGAGAATTGGCTGCAAAAGATACTTGTCAGCAAGGGACATCAGAGAGGGTTCCTCAAATCTGAATCTTGCATT TGTCGCACAATTGTTTCATCACAGGAGTGGCTTATCTACAGACACTAAAAAGGTCTCCTTTGCTACGATGATGACGGATGATGTGCAAACATCTAGAGAA GAGAGATGCTTCCGGTTGTGGATCAATAGTCTTGGAATTTCTACGTATGTATATAATGTATTTGAGGATGTCAGAAATGGATGGATACTTTTAGAAGTGC TAGACAAGATTTTTCCTGGATCGGTTAACTGGAAACATGCAACAAAACCTCCGATTAGGATGCCGTTCAGAAAGGTAGAGAACTGCAACCAGGTTGTAAA AATTGGTAAACAACTGAGATTCTCACTAGTCAATGTAGCTGGTAATGACATTGTGCAAGGAAATAAGAAGCTCATTCTTGGTAATCCCTACATCTCAATG TGTCTTCCATCCTTCCATACTTAATTTTATGGTCATAATTTGCTTTTTGTAAATTTTTTTTTTGTATTCTTAAATTCTGTCAGTTTTAGCTTTCTATTTG TGAGCATTGCACAATTGGATCCAGCGATTTCCTCCAGCCCTCATTTCAAAGAGTTTAACGCACATTACTTAGATGGAAATTGGTCTTGTGACAATATTTA CTATTTAACACTTTCCGGTGCCTTCCTTTCCACTTCTATCTTTGAATTTCGACATATAGGATCTATTGCTTTTCAGGACAGATTAATTGATATTGTTTTT CATGTCCTGATAAGTGCAGTTACTTTTACTTTATTGCCAACCTGAGTTCCTTGACAATAATCTATATTGCACTTAATGATATTGCATAGTGCATCAAAGA AACTTTCTGTTCATAATGCTTCATAGTTTAAAATCTCATATTATTTTTTTGCAGCTTTATTGTGGCAGTTGATGAGATTCACAATGCTTCAACTGTTGAA AAATTTGAGATTGCACTCACAAGGAAAGGAGATAAGTGACGCCGATATCCTCAAATGGGCAAACAGAAAAGTGAAGAGCGCTGGCAGAACGTCTCACATA GAGAGTTTCAAGGATAAGAGCTTGTCAAATGGACTCTTTTTCCTTGAGCTTCTCAGTGCTGTGGAGCCTAGAGTTGTGAATTGGAACCTTGTCACCAAGG GTGAAAAGGATGATGAGAAGAGGTTGAATGCCACCTACATAATCAGTGTTGCTAGAAAGCTTGGTTGTTCCATCTTTTTGTTACCTGATGATATTATGGA AGTTAATCAGAAAATGATGATGACTCTTACAGCAAGTATAATGTATTGGAGCCTGCAACAACAAAGTGAAGATACAGATTCATTTCCTTCACCTGCTGGC ACTGCTACTCCTACCACACCAGAAGCATCACCAGCACCATCACTTTGTGGTGAAGATGAAAGTAGTTCCTCCATTGGTGCTGAATTCTCCAACATATGTG TTGATGATGCCACCTCTGACACAACAGTGTCTTCCTCTGAGGCTGTTCTTGTTGGAGATGACCTATGACTCTATCAGGGTCTGTTCTTAATGTTGTCTAC TTTACATTTTGCAAAGTTTTATTCACAACATGGATGGGTCTGAATTATTTATTTTTTTGGTATAGCTGGAAAATATACATACGTCTCTATGGTCTTAACT TCCAAGAAGTTATGTATTTAATTTATTTAAGCTTATAGGGTATAGATGTGAATAATATGTACAACCAACAATAATGCCATTTTACCATTCAAACACTACA TTTAATTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80385; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_51681
| Blastp | Fimbrin-5 from Arabidopsis with 62.12% of identity |
|---|---|
| Blastx | Fimbrin-1 from Arabidopsis with 69.9% of identity |
| Eggnog | Microtubule associated monoxygenase, calponin and LIM domain containing(COG5069) |
| Kegg | Link to kegg annotations (AT5G35700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456581.1) |
| Pfam | Calponin homology (CH) domain (PF00307.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |