Id Trinity | FTRINITY_DN58820_c2_g1_i28 |
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Name Transcript | Ll_transcript_51692 |
Sequence | CCAAAGACCAAAAAAAATACTTGTTTTTGTTGTTGCTTTTCTCTCACTTTGCCACCCCATTAAGAAAAATCAATCCTTTCTCTCTTTCCACACTTCTCCC CTCTCTCTCTCTCTCTCTCTCTTACTCTTCTCCATGTTTCTTCATTCAATCACTTAGTTACTATTGCAATCCTCCATGTTTCTTATCTCTACCAAGAGGT TTATTCATATTTTTTGAAATACCATAATTTAATATTACACTTACCCCTAAGTAAAATGTAAAATGTAAAATGTTATAAAAATGAAAATGTAGTAAAGTCC TATAAAAAAGAGTAATAATGAGGATTGATGAACCTTGGTGACTGGGATACATATCTCATTTTTATGTGTATGTCAACATTACTGGTGTATCTCACCGGTT CATTTATGAGCCTAGTTTTCTTAAAATAATCAAACACGAATAGTAATATTGTACACCTTTGCTTAGTTCTTACTCTACTTTATTTCTTTGAATCTCACTA CTATCTAGTTCTACTCTTTTCTTGATCTCAATCTCAGTTGACTTCTGCTCTCTTTATTCATTGGGGTGAAAGCTAAATAGGCTTCATTCTTTTCTATGCA TTGTCAAAACTATCAGATGCAGTTGGAAGGAATATAAATATAAATATGGATATTTGTGATGTTTATTGAATGACAAGGTTTTTGTTTTTCTGAATAATAA CTAATCTAACAAATTCCCATGTATTTTCTTTTATCTGTTTCTTGTTATCCTTCTTATGTTTTCCTTATTTAGTATATCTTTTTGTTTTATGTTTTCTGTC AGATAACGTTGGACAGGTTGGTGCATCCCAGGAATTATAACACTTTGTACTTGTGTTTTTTTAGAGATTTGGTCCTTATATTTCAATTTGACCGTGTAAA ATTGTATCTGGCATTAGTTTAGGTTGTTGAGTAGTACAACACTGCAAATTGTTCCCTTTAAAAAATATTTTTAAGCTTTTCTGGGGATACAATTTGTAGA ATTAGTCATTCACCAAGATGTCAAAATTCGAGGGTGTTATTGTCTCGGATCAATGGCTTCATAGCCAGTTTACGCAGGTCGAACTTCGCAGCCTCAAATC CAAATTTGTCTCTTTAAAGAATCAGAATGGTAAAGTTACATATGGTGATTTGCCACCTTTGATGGTGAAACTAAAGGAATTCAGAGACACATACAATGAG GATGAGATTAGAGTTATCTTGGGAGAGTCAGATGCTAACGTGACCGATGATATTGATTTTGAAGCCTTCTTAAGGGCATATTTGAATTTGCAAAACCAAG CTACGGTGAAACAAGGCGGTAGAAGGCACTCTTCATCATTCCTTAAGGATAGCATAACTACCCTTCTTCATACAATCAGTGATTCAGAACAAGCTTGTTA TGTTGCCCACATAAACAGCTACCTTGGTGACGATCCATTTCTGAGTCAATTTCTTCCCCTGGACCCGGCTACAAATGATCTTTTCGATCTTGCAAAGGAT GGCGTTCTTCTGTGTAAGCTTATCAATGTTGCTGTGCCTGGGACGATAGATGAACGAGCCATCAACGCCAAACAAAATCTCAGTCTTTGGCAGAAGAATG ACAACCATAATTTATGCCTCAATTCTGCCAAAGCTATTGGCTGCACAGTGGTTAACATTGGTGCGCAAGACTTACTTGAAGGAAGACCTCATCTTGTTCT AGGGTTGATTTCCCAAATCATAAAGATCCAACTCTTGGCAGATCTCAACCTTAAGAAGACACCCCAGCTTGTGGAATTGGTTGATGACAGCCAGGATATT GAAGAGCTTCTTAGTTTGTCCCCTGAAAAGGTCCTACTAAAATGGATGAATTTTCATATCAAGAGAGGGGGTTACCAGAAAACTGTCAAAAACTTTTCTT CTGATGTTAAGGTATGTTGGCACTTCTTTAGAACATTTAATGATGAAACAATGATGCTTTATATTGGATTAACTAGTATATGATTTTTTTGTAACTATAC CTGTATACCTGGAGCACAACTAGTTGAGGATAAGTGTAATTCGAGGAGGTGAGTTTTAAAGAATCTAAAATTTGGTTTACTCTATAATATTTTAGACTCT GAAGCATGTTAAACAATTGACTTTCAGTTTAAACTTGCATAGAAGAGATATAGTGTAAAATGTCATGGAAGAGGTATAATGTAAAGAATTGACTTTCTGC TTACTACATATAAAAGGATGGAGAGGCTTATGCTTATCTGCTTAATGTCCTTGCTCCTGAGCATAGCAGTCCAGCAACCCTGGACACCAAGGACGCCTAT GAAAGGGCAAATCTGGTTCTTGACCATGCAGAGAGAATTGGCTGCAAAAGATACTTGTCAGCAAGGGACATCAGAGAGGGTTCCTCAAATCTGAATCTTG CATTTGTCGCACAATTGTTTCATCACAGGAGTGGCTTATCTACAGACACTAAAAAGGTCTCCTTTGCTACGATGATGACGGATGATGTGCAAACATCTAG AGAAGAGAGATGCTTCCGGTTGTGGATCAATAGTCTTGGAATTTCTACGTATGTATATAATGTATTTGAGGATGTCAGAAATGGATGGATACTTTTAGAA GTGCTAGACAAGATTTTTCCTGGATCGGTTAACTGGAAACATGCAACAAAACCTCCGATTAGGATGCCGTTCAGAAAGGTAGAGAACTGCAACCAGGTTG TAAAAATTGGTAAACAACTGAGATTCTCACTAGTCAATGTAGCTGGTAATGACATTGTGCAAGGAAATAAGAAGCTCATTCTTGGTAATCCCTACATCTC AATGTGTCTTCCATCCTTCCATACTTAATTTTATGGTCATAATTTGCTTTTTGTAAATTTTTTTTTTGTATTCTTAAATTCTGTCAGTTTTAGCTTTCTA TTTGTGAGCATTGCACAATTGGATCCAGCGATTTCCTCCAGCCCTCATTTCAAAGAGTTTAACGCACATTACTTAGATGGAAATTGGTCTTGTGACAATA TTTACTATTTAACACTTTCCGGTGCCTTCCTTTCCACTTCTATCTTTGAATTTCGACATATAGGATCTATTGCTTTTCAGGACAGATTAATTGATATTGT TTTTCATGTCCTGATAAGTGCAGTTACTTTTACTTTATTGCCAACCTGAGTTCCTTGACAATAATCTATATTGCACTTAATGATATTGCATAGTGCATCA AAGAAACTTTCTGTTCATAATGCTTCATAGTTTAAAATCTCATATTATTTTTTTGCAGCTTTATTGTGGCAGTTGATGAGATTCACAATGCTTCAACTGT TGAAAAGATTGAGATCTCACTCCCAAGGAAGGGAGATAAGTGATGCTGATATCCTCAAATGGGCAAACAGAAAAGTGAATAGCACTGGCAGAACATCTCA CATAGAGAGTTTCAAGGATAAGAGCTTATCAAATGGACTCTTTTTTCTGGAGCTTCTCAGTGCTGTGGAGCCTAGAGTTGTGAATTGGAACCTTGTCACC AAGGGTGAAAAAGATGATGAAAAGAGGTTGAATGCTACCTACATAATCAGTGTTGCACGAAAGCTTGGTTGTTCTATCTTTTTGTTACCTGACGATATTA TGGAGGTTAATCAGAAGATGATTCTCATTCTTACAGCAAGTATAATGTATTGGAGCCTTCAACAACAAACCGAAGATACAGATCCATTTCCTTCACCTTC TGGTACAGCTACCACTACGACACCAGAAGCATCACCAGCACCATCACCAGCACCATCAGTTTATGGTGAAGATGAAAGTAGTTTCTCCCTTGGTGGTGAA TTCTCCAACATAAGTGTTGATGATGCCACCTCTGACATATCAGTGTCCTCTGAAGGTGTTCTAGTTGGAGATGAGCTATGAGGGGTTGTTCTTGTTCTTA ATGTTATATACAACATCATGAGCCTAGTTTACATTTTGCAATGCTTTCATAGTATGATTTGGTTTTTTTGGTAGAGTTGGAAATTATAACAATGCTCAAG AAACATATCTATTATGGTCTTAATTTCCAAGAAGTTAAGTGTGTAATAGGGAATAGATGTGAATAATGTGTACAAAAATATATTGTTCTTTAGAGAGTAA TGAGAATTGAGAGGGGACAGAATAAAGGGTAGAGGGAAAACAAATGCAAGAGATCAATAAGTGTATCTTAACAATTTTTTGATGAATTCTTCTGTAAGCA GATTCCAACTTGTTTTGCATTTAGTCATATTTCAATATGTTGCTACCAAGTACCAACAATTGTTGCATTTTACCATGCAAACAGAAAAGGTAATTTGGTA AAAATAGTTAAGGTACCCTATTTTGACAGTTTTTCATGATAAAGCTACATTTAAATTAAGAAGTCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_80385; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_51692
Blastp | Fimbrin-1 from Arabidopsis with 68.91% of identity |
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Blastx | Fimbrin-1 from Arabidopsis with 69.9% of identity |
Eggnog | Microtubule associated monoxygenase, calponin and LIM domain containing(COG5069) |
Kegg | Link to kegg annotations (AT4G26700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456581.1) |
Pfam | Calponin homology (CH) domain (PF00307.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |