| Id Trinity | FTRINITY_DN58820_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_51670 |
| Sequence | CCAAAGACCAAAAAAAATACTTGTTTTTGTTGTTGCTTTTCTCTCACTTTGCCACCCCATTAAGAAAAATCAATCCTTTCTCTCTTTCCACACTTCTCCC CTCTCTCTCTCTCTCTCTCTCTTACTCTTCTCCATGTTTCTTCATTCAATCACTTAGTTACTATTGCAATCCTCCATGTTTCTTATCTCTACCAAGAGGT TTATTCATATTTTTTGAAATACCATAATTTAATATTACACTTACCCCTAAGTAAAATGTAAAATGTAAAATGTTATAAAAATGAAAATGTAGTAAAGTCC TATAAAAAAGAGTAATAATGAGGATTGATGAACCTTGGTGACTGGGATACATATCTCATTTTTATGTGTATGTCAACATTACTGGTGTATCTCACCGGTT CATTTATGAGCCTAGTTTTCTTAAAATAATCAAACACGAATAGTAATATTGTACACCTTTGCTTAGTTCTTACTCTACTTTATTTCTTTGAATCTCACTA CTATCTAGTTCTACTCTTTTCTTGATCTCAATCTCAGTTGACTTCTGCTCTCTTTATTCATTGGGGTGAAAGCTAAATAGGCTTCATTCTTTTCTATGCA TTGTCAAAACTATCAGATGCAGTTGGAAGGAATATAAATATAAATATGGATATTTGTGATGTTTATTGAATGACAAGGTTTTTGTTTTTCTGAATAATAA CTAATCTAACAAATTCCCATGTATTTTCTTTTATCTGTTTCTTGTTATCCTTCTTATGTTTTCCTTATTTAGTATATCTTTTTGTTTTATGTTTTCTGTC AGATAACGTTGGACAGGTTGGTGCATCCCAGGAATTATAACACTTTGTACTTGTGTTTTTTTAGAGATTTGGTCCTTATATTTCAATTTGACCGTGTAAA ATTGTATCTGGCATTAGTTTAGGTTGTTGAGTAGTACAACACTGCAAATTGTTCCCTTTAAAAAATATTTTTAAGCTTTTCTGGGGATACAATTTGTAGA ATTAGTCATTCACCAAGATGTCAAAATTCGAGGGTGTTATTGTCTCGGATCAATGGCTTCATAGCCAGTTTACGCAGGTCGAACTTCGCAGCCTCAAATC CAAATTTGTCTCTTTAAAGAATCAGAATGGTAAAGTTACATATGGTGATTTGCCACCTTTGATGGTGAAACTAAAGGAATTCAGAGACACATACAATGAG GATGAGATTAGAGTTATCTTGGGAGAGTCAGATGCTAACGTGACCGATGATATTGATTTTGAAGCCTTCTTAAGGGCATATTTGAATTTGCAAAACCAAG CTACGGTGAAACAAGGCGGTAGAAGGCACTCTTCATCATTCCTTAAGGATAGCATAACTACCCTTCTTCATACAATCAGTGATTCAGAACAAGCTTGTTA TGTTGCCCACATAAACAGCTACCTTGGTGACGATCCATTTCTGAGTCAATTTCTTCCCCTGGACCCGGCTACAAATGATCTTTTCGATCTTGCAAAGGAT GGCGTTCTTCTGTGTAAGCTTATCAATGTTGCTGTGCCTGGGACGATAGATGAACGAGCCATCAACGCCAAACAAAATCTCAGTCTTTGGCAGAAGAATG ACAACCATAATTTATGCCTCAATTCTGCCAAAGCTATTGGCTGCACAGTGGTTAACATTGGTGCGCAAGACTTACTTGAAGGAAGACCTCATCTTGTTCT AGGGTTGATTTCCCAAATCATAAAGATCCAACTCTTGGCAGATCTCAACCTTAAGAAGACACCCCAGCTTGTGGAATTGGTTGATGACAGCCAGGATATT GAAGAGCTTCTTAGTTTGTCCCCTGAAAAGGTCCTACTAAAATGGATGAATTTTCATATCAAGAGAGGGGGTTACCAGAAAACTGTCAAAAACTTTTCTT CTGATGTTAAGGTATGTTGGCACTTCTTTAGAACATTTAATGATGAAACAATGATGCTTTATATTGGATTAACTAGTATATGATTTTTTTGTAACTATAC CTGTATACCTGGAGCACAACTAGTTGAGGATAAGTGTAATTCGAGGAGGTGAGTTTTAAAGAATCTAAAATTTGGTTTACTCTATAATATTTTAGACTCT GAAGCATGTTAAACAATTGACTTTCAGTTTAAACTTGCATAGAAGAGATATAGTGTAAAATGTCATGGAAGAGGTATAATGTAAAGAATTGACTTTCTGC TTACTACATATAAAAGGATGGAGAGGCTTATGCTTATCTGCTTAATGTCCTTGCTCCTGAGCATAGCAGTCCAGCAACCCTGGACACCAAGGACGCCTAT GAAAGGGCAAATCTGGTTCTTGACCATGCAGAGAGAATTGGCTGCAAAAGATACTTGTCAGCAAGGGACATCAGAGAGGGTTCCTCAAATCTGAATCTTG CATTTGTCGCACAATTGTTTCATCACAGGAGTGGCTTATCTACAGACACTAAAAAGGTCTCCTTTGCTACGATGATGACGGATGATGTGCAAACATCTAG AGAAGAGAGATGCTTCCGGTTGTGGATCAATAGTCTTGGAATTTCTACGTATGTATATAATGTATTTGAGGATGTCAGAAATGGGTATGTGTCCCTTCTA TTAAACCACATCAATTCTTTCTTTTGTCATAATCAAAAGCCTTACATATATATCCACCCATTTTTTGAGTCTTAAGAGGAAATGACTGAATGAGCCACCA AACATATTTATCCACCCATTTCTCTTTCACTGAATTAGCCACAGGCACATATTCATGTATTTGTGATATCCAATCTAATTTACTGTAGATGGATACTTTT AGAAGTGCTAGACAAGATTTTTCCTGGATCGGTTAACTGGAAACATGCAACAAAACCTCCGATTAGGATGCCGTTCAGAAAGGTAGAGAACTGCAACCAG GTTGTAAAAATTGGTAAACAACTGAGATTCTCACTAGTCAATGTAGCTGGTAATGACATTGTGCAAGGAAATAAGAAGCTCATTCTTGGTAATCCCTACA TCTCAATGTGTCTTCCATCCTTCCATACTTAATTTTATGGTCATAATTTGCTTTTTGTAAATTTTTTTTTTGTATTCTTAAATTCTGTCAGTTTTAGCTT TCTATTTGTGAGCATTGCACAATTGGATCCAGCGATTTCCTCCAGCCCTCATTTCAAAGAGTTTAACGCACATTACTTAGATGGAAATTGGTCTTGTGAC AATATTTACTATTTAACACTTTCCGGTGCCTTCCTTTCCACTTCTATCTTTGAATTTCGACATATAGGATCTATTGCTTTTCAGGACAGATTAATTGATA TTGTTTTTCATGTCCTGATAAGTGCAGTTACTTTTACTTTATTGCCAACCTGAGTTCCTTGACAATAATCTATATTGCACTTAATGATATTGCATAGTGC ATCAAAGAAACTTTCTGTTCATAATGCTTCATAGTTTAAAATCTCATATTATTTTTTTGCAGCTTTATTGTGGCAGTTGATGAGATTCACAATGCTTCAA CTGTTGAAAAGATTGAGATCTCACTCCCAAGGAAGGGAGATAAGTGATGCTGATATCCTCAAATGGGCAAACAGAAAAGTGAATAGCACTGGCAGAACAT CTCACATAGAGAGTTTCAAGGATAAGAGCTTATCAAATGGACTCTTTTTTCTGGAGCTTCTCAGTGCTGTGGAGCCTAGAGTTGTGAATTGGAACCTTGT CACCAAGGGTGAAAAAGATGATGAAAAGAGGTTGAATGCTACCTACATAATCAGTGTTGCACGAAAGCTTGGTTGTTCTATCTTTTTGTTACCTGACGAT ATTATGGAGGTTAATCAGAAGATGATTCTCATTCTTACAGCAAGTATAATGTATTGGAGCCTTCAACAACAAACCGAAGATACAGATCCATTTCCTTCAC CTTCTGGTACAGCTACCACTACGACACCAGAAGCATCACCAGCACCATCACCAGCACCATCAGTTTATGGTGAAGATGAAAGTAGTTTCTCCCTTGGTGG TGAATTCTCCAACATAAGTGTTGATGATGCCACCTCTGACATATCAGTGTCCTCTGAAGGTGTTCTAGTTGGAGATGAGCTATGAGGGGTTGTTCTTGTT CTTAATGTTATATACAACATCATGAGCCTAGTTTACATTTTGCAATGCTTTCATAGTATGATTTGGTTTTTTTGGTAGAGTTGGAAATTATAACAATGCT CAAGAAACATATCTATTATGGTCTTAATTTCCAAGAAGTTAAGTGTGTAATAGGGAATAGATGTGAATAATGTGTACAAAAATATATTGTTCTTTAGAGA GTAATGAGAATTGAGAGGGGACAGAATAAAGGGTAGAGGGAAAACAAATGCAAGAGATCAATAAGTGTATCTTAACAATTTTTTGATGAATTCTTCTGTA AGCAGATTCCAACTTGTTTTGCATTTAGTCATATTTCAATATGTTGCTACCAAGTACCAACAATTGTTGCATTTTACCATGCAAACAGAAAAGGTAATTT GGTAAAAATAGTTAAGGTACCCTATTTTGACAGTTTTTCATGATAAAGCTACATTTAAATTAAGAAGTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80385; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_51670
| Blastp | Fimbrin-1 from Arabidopsis with 68.91% of identity |
|---|---|
| Blastx | Fimbrin-1 from Arabidopsis with 69.9% of identity |
| Eggnog | Microtubule associated monoxygenase, calponin and LIM domain containing(COG5069) |
| Kegg | Link to kegg annotations (AT4G26700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456581.1) |
| Pfam | Calponin homology (CH) domain (PF00307.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |