| Id Trinity | FTRINITY_DN58821_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_52171 |
| Sequence | TCGACATCGTCGCCTGCACCACCATCTACGGCCCTTCGTCGGCGCCGGAGAAGAATTCCACCACCACCACCACCACCGTCACCACCACCACGAAGTCTCC GGCGGAGGTTGTTGACGGAGACTGTGAGATAAGCCACTCGTGCCCGAAGCTTGGAAGCTTCTACGAGTTTTTCTCTCTTTCGCATCTCACTCCACCACTT CAATATATAAAGAAAACAGTGAAACGACAGGTTCAGGAGATATCAAACGCGGATCATTTCTTCTCCCTTGATGTGAAGCTGTGTAATGGGAAAGTTGTAC ATGTTGAAGCATGCAGAAAAGGATTCTACAGTATTGGAAAACAGAGGATTCTGTGTCATACTCTTGTTGATCTGTTGAGACAGCTTAGTAGACCTTTTGA TGCTGCTTATGATGACCTCTTGAAAGCATTTTCGGATCGTAACAAGTTTGGGAATATCCCCTATGGATTAAGAGCCAACACATGGCTTGTTCCTCCGATT GTGGCACAATCACCATCATTTTTTCCTCCTCTTCCCGTGGAGGACGCAAATTGGGGAGGAAATGGTGGTGGTTTTGGAAGAGATGGGGAGTTTGATTTGA TTCCTTGGGCCAGCGAATTTTCATTTATTGCATCTATGCCTTGCAAGACCTCAGAAGAAAGACAAGTTCGTGATAGAAAAGCATTCCTTCTTCACAGCCT ATTCGTTGACGTTGCCATTTTCAGAGCTATTAATGCTGTTAAACATGTTATGGGAGAACCAGATTTAAGCTCTCCCGTCTCAGAAAATGGGGTTCTTTAT ACCGAGAGAGTTGGTCACATGAGTATCAAAGTCATGAAAGATGCTACTGTTGCAAGTTCTAAAGTTGATACTAAAATTGATGGAGTTGAAGCCACAGGAG TAAATCTAAAGGAACTAGTAGCTCGAAATCTATTGAAAGGAATTACTGCTGATGAGAACACTGCAGCCCATGATACTACCACTTTAGGTGTTATTAATGC GAGATATTGTGGTTATGTGGCTGTTGTGAAAGTTGAGAGTGGAGAAATGGACTGTCCATCTTATCAAAATACTGAATTTCTTGATCAGCCAGAGGGTGGC GCCAATGCACTCAACATTAACAGTTTGAGATTACTTCTCAACACAACACAGTCGGAAAACAGTAGACCAGTTACTGAGATACAAACACTTGAGAATGAAG AGCTTGGAGCCTCCCATGCTTTTGTGGAGAGGCTGATTAAAGAAAGCCTTTCTAAGCTTGAGGAAGAGGAAACAGGTTTGGACAATTTCGTCAGATGGGA ACTTGGAGCCTGCTGGTTACAACATTTGCAAGATCAAAACAACACTGAAAAGGACAAGAAACCATCGTTGGATAAGGCTAAAAATGAAATGAAGGTTGAG GGGCTAGGGAAACACCTAAAAGCCCTCAAGAATAATAAAATTAAATCCGATCTAACTGACCTTAAATCGGCATCTGAAAACTCCAAACCTCCTCATGTGT GTGTTAATCGGGAGGCTGAAAGTGCTTCACTGCTTTCAGCAGAATCTCAATATGAAACTACCACAGCAGAAAATGAGCTTGTGCTGAAGGGGATGTTATC TGAAGCAGCATTTACCCGACTAAAAGAATCTGGAACTGGACTTCACCGCAAGTCAATTCAAGATCTGATTGACTTGTCTCAGAAATATTACATTGATGTT GCTCTCCCAAAACTGGTAGCAGATTTTGGCTCATTGGAACTCTCGCCTGTTGATGGCCGCACCCTAACTGATTTTATGCATACTAGGGGTCTACGAATAC GGTCTCTTGGACATGTTGTCAAGCTATCTGAAAAGCTATCACATGTGCAATCACTTTGTATTCATGAGATGATAGTTCGAGCTTTCAAGCACATCCTGCA GGCTGTGATTGCAGTTGTTGACAAGGAGAAAGTGGCTACTACAATAGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAATCAGATAAA CCGTGCAAAACCCATCCCCTTGTGTGGAAATGGCTAGAGGTGTTTCTGAAGAAGCGATTTGATTGGGATGTTAGCAACTTGAATTACAATGATGTGAGGA AGTTTGCAATTTTACGTGGGTTATGTCACAAGGTTGGCATTGAGCTTGTTCCAAGGGACATTGACATGGATTCTCGTATTCCTTTCCACAAATCTGATAT AGTCAGCTTGGTCCCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTTCTAGAGTCATCAAAAACAGCTTTAGACAAGGGAAAGCTT GAAGATGCAGTTACGTATGGGACAAAGGTATCCATCTCAAGATCCCTTTGAAGAAAAATCTATGAACTACTGAAAATTGGCTTCAATAGCTAATATATTT TGGTAATCTATTATGACTGCAATAATTTGTTGGTGACAGGCTCTTGCCAAGCTGGTAGCGGTTTGTGGTCCTTATCATCGAATGACAGCGGGAGCATACA GCTTACTTGCTGTAGTCTTATATCATACTGGAGATTTCAACCAGGCTACAATTTATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTCTGGA TCATCCAGATACGATGAAGAGTTATGGGGATCTTGCAGTTTTCTATTATAGACTTCAACATACAGAGCTGGCTCTAAAGTATGTAAAGCGTGCTCTATAT CTTCTGCATCTGACATGTGGTCCATCTCACCCAAACACTGCCGCAACATACATTAATGTGGCTATGATGGAGGAAGGTCTGGGAAATGTGCATGTTGCTC TCAGATATCTCCACAAAGCTTTGAAGTGCAACAAAAGATTACTTGGTCCAGATCATATTCAGACGGCTGCCAGTTATCATGCAATAGCAATAGCACTTTC ATTGATGGAAGCATATCCTTTGAGTGTGCAGCATGAGCAAACAACTTTGAAAATTCTGCGGGCAAAACTTGGCCCAGATGACTTGCGTACACAGGATGCT GCTGCATGGCTTGAGTATTTCGAGTCCAAGGCTTTTGAACAACAAGAGGCTGCACGTAGCGGTGCTCGAAAGCCTGATGCATCAATAGCTAGCAAAGGCC ACCTAAGTGTGTCAGATCTGCTTGATTACATTAATCCTAATGATGATGCCAAAGGAAGAGATGTGGCAGTAAAGAGAAGAAGCCAGATAGCAAAGGTGAG GACAAAATCTAACCAGAACAATGGCTCAGCAAGTTCTGACGAGTCTTCAAAAGAAACTTCAAAAGAGACTTCAGATGAGGATGTACATATACCTGTACCA GGAGTTTCTGCAAATGCTGAGCAGGAGACAAAGTCTGTGCCCGATTCAGAACAGCCTATTTTAGAAAAGACCTCAGATGAAAAACAACATATTTGGGGTA ACTCGTCTGAGGCAAATGCTGATGGAGAGGATGGATGGCAACCAGTTCAACGACCAAAGTCTTCCGGTTCATATGGCCAGCAACGGAAGCAAAGACGAGC AACAATTAACAAAGTTTCTTACCAGAAGAAGAATGTGGAATCTGGCACAGACCATCCTTCTGTAAGGAGTACTAATCAGAGTGGGAGATATTACTTTTCG AAGAAGCGAACAATATCCCATGGGAGTTCTACTGATAATCATTCAGAAAACGTAGCCCAGGGCTCTAAATTTGGGAGGAAAGTGGTCAAAGCTGTTACGT ACAGGGTCAAGTCCGTTTCTGCAGTTACAGATACTACTGCAAAGGATACATCAAAAATCATAGATCACCTATTTAGTTCTAACACGGCAGAACTCAGTTC AAATTCTTCATCAAATGATGTCAATCCTGTCAAGACTTCTATGGTTAGTCTTGGAAAATCTCCTTCATATAAGGAAGTGGCATTGGCTCCTCCTGGGACA ATCTCCAAGTTGCAGGTCTATAATCCCCAAAGTGAGATTCCTGGTAGTAATGACCGCGGTGTTGGAAAACATGAAGAGGAAGATACTGAAGCACATGCTA ACTCTAACCCAACCGTAGAAGAAGTAAACAATATATTTGAACAGAAGGACGCAGATTTTTCTGAGAAGAGAGACGGAACACAGTTTGCTGATGTTGCACA ATATAATCTTGAGAGTGCTAAGAGACTTGAATCTGGGGATGTTGAGGCTCATGAAGCAGCTGATAATATCATAATGATTGATGCAGTGGAGGATCCTGTG GATTCTCACAAACTAGAACTTGATACAAGTGCATCTCGCAGTTTTGAAATACCTAATAGTGATACAAATATCATCTCACAAGAAGGTGATGATTTACGGG TCAATATCTCTCCATCAAGTAAGAAGTTGTCTGCGTCTGCAGCTCCATTCAACCCATCGCCAGGTATTGCACGCCCTGCACCAGTTTCCATGAACATAAC TCTTCCTTCTGGTCCAACCATTTGCCCCTGGCCAGTAAATATGAATGTTCACCGTGGACCTGCTACTTTGTTACCTGCAGTTACCGCAATGTGTTCCTCT CCTCACCATGCATACCCTTCACCTCCGGCAACACCAAACATGATTCAACCATTGCCATTTATGTATCCTCCTTTCACTCAACCTCAATCAATACTAACCA CCAACTTTCCAGTTACCACCAGTGCATTTCATGCCAATCATTTTGCTTGGCAATGTAATATGAACCAAACAGTACCTAAGTTTGCTCCCAACCCTGTCTG GCAGGGGTGCCATCCTGTAGAATTTTCTCTTCCAGCACCTGTCCTTGAACCAATTCCTGATCACATTTTGCAGCCACAGGAACAGTGTAATGTTTCTCAA ATTCCAGGTTCTACATTGGTTCTTCCGGAGGACGCGAATAATGTCAGGGAATCTAACGAAGAGGTGAAAGTTCTCGAATCAAAGACTAGTGAATATGAGT TTGGTAAAGTTCATCCAGAAATCGTAAAGGAAAATGCTGGGAACATGACAAATCATAATATCGGCTTGAATGAAAGTGTTGGCAATAGTGAAGAGAACTT GGACGGTGGGAAAACTGTCAGCATTTTGATTCGGGGAAGAAGAAACCGGAAGCATTCTTTGAGAATGCCGATAAGTTTGCTTACTAGACCCAACAGCTCT CAGTCGTTTAAAGCTGTTTATAACCGCGTAATTAGAGGAAATGACGCCGTTCCGAAGTCCATCAACTTGTCTTCTGGTAAAGATTGTATAGCTACTGCTT AACTCAGTTCTTATTGTTACTAACAAGAAATAGTAGCAGAATTACTGCTGGTAACGAAGAGAGATACTTCATAATGTCACATACAGAAGGAGATGTGGTG CTTTAATCATCTTTGGAACTCAATTACAGTTTTCCTGCAGCTGTGTGGCTGCACTACCTTTTGGAATGTTAGGTATTCCACTTCTAAACCCTTCTTTTTG TTGAAGTTACAATTTTGGAAAGTATTTTTTATTCATCTAAACAAAGCATGCTCACATAAAAAGAAAACTCATTTATATCTAATTTGAAGAGACTGTTTGC ATCAATGAAGTCCTTTTATCATTGGATTTGGATTTGGATTTGACTAACTTTATCATAATTACTTATAAAAACTTGCAGATTCTTCTACATGGAGGTGGAT GACTGGAGTTTTTTCTTCAATTTGAGGTACTCTAACTAACAAAAACTATAGCTTTTTATTGATCATTTAAATTACTTTGTAGCTCCCTCTACTTTTCTAT GAATAAATTCAAATAGGCCCCTAAATTTTTTGTTTGTTGCGATCGGGTCCATGAGTGCATAGAAATTTATATCCGGGACATATTTCAAATTTTCCAAAAA AATCCAGGGACCTATTTGAAATCTGCTAAAAGTGCAGATTTTAGGACCTAAAGTGTACCTAAACTTAATTGATTGAGTTGTTGGAGCTAGTCCACGTTGT TATGTGTAGAACACTCTTAGCACATTGGGTTAATTTAGTTGCCACATAGAAATGTTCAATGTTGATGTGAATTAACTTTACATAGAAGTTTGTGTAGAAA AGTTATTGATGGCAGTTATGTTGTTTACTATGCAGGTTCTTTGCAGTGAGTTTGGGTTACAGAGGTGAACCTTCAATGTAACAAATTCAGTTAGGAAATT TTGATATTCTGAATTAAATCATTAAAGACAGTTTCTAATTTTTTCTCAGTATTTTTAACACCATTTACAATGACATTGTCAATTAATTTGGGTCATTTGT ATAGACTTATCAATAATTTGCCAGGAATTAGTGGTTTTTTTTGTTGGTTGACTTGAGATTTAATCTAATTCTTATAATTGAAATCATGTGATGGATAAAT TTTGAGTGATATATTTTTCATAAATGGCAAGGAACTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80392; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_52171
| Blastp | Protein TSS from Arabidopsis with 43.8% of identity |
|---|---|
| Blastx | Protein TSS from Arabidopsis with 49.17% of identity |
| Eggnog | Involved in proper cytoplasmic distribution of mitochondria (By similarity)(ENOG410XQUQ) |
| Kegg | Link to kegg annotations (AT4G28080) |
| CantataDB | Link to cantataDB annotations (CNT0001002) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440439.1) |
| Pfam | Tetratricopeptide repeat (PF13424.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |