Ll_transcript_52190

• Id Trinity: FTRINITY_DN58821_c2_g1_i17
• Name Transcript: Ll_transcript_52190
• Sequence: GGAAGAGATGGGAAGTATGATTTGATTTCCTGGGCCCATGAGTTTTCATTTATTGCATCTATGCCTTGCAAGACAGCAGAAGAAAGACAAGTCCGTGATA GAAAAGCATTCCTTCTTCACAGTCTATTCGTTGATGTCGCCATTTTCAGAGCTATTAAGGCTGTTAAACATGTGATGGAAGAACCAGATTTAAACTGCTC TATCTCAGAAAGTAATATTCTTTACACCGAGACAGTTGGTCATTTGAGTATTGAAGTCACAAAAGATGCTACTGTTGCAAGTTGTAAAGTCGATACTAAA GTGGACGGAGTTAAAGCCACAGGAGTAAATCAGAAGGATCTATTAGCTCGAAATCTATTGAAAGGAATTACTGCTGACGAGAACACTGCAGCCCATGATA TTACCACTTTAGGTGTTATTAATGTGAGATATTGTGGTTATGTGGCTTATGTGAAAGTTGAGGGTGGAGAAAACGACAATTTTGACTCTTCATCTTATCA AAATACTGAATTTCTTGATCAGCCAGAGGGTGGCGCCAATGCACTCAACATTAACAGTTTGAGATTACTTCTCAACACAACACAGTCAGAGAACAATAGA ACAGTGACTGAGATACAAACGCTTGAGAATGAAGAGCTTGGAGCCTCCCATGCTTTTGTGGAGAGGCTGATTAAAGAAAGCCTTTCTAAGCTTGAGGAAG AGGAAACAGGTTTGGACAATTTCGTCAGATGGGAACTTGGAGCCTGCTGGTTACAACATTTGCAAGATCAAAACAACACTGAAAAGGACAAGAAACCATC GTTGGATAAGGCTAAAAATGAAATGAAGGTTGAGGGGCTAGGGAAACACCTAAAAGCCCTCAAGAATAATAAAATTAAATCCGATCTAACTGACCTTAAA TCGGCATCTGAAAACTCCAAACCTCCTCATGTGTGTGTTAATCGGGAGGCTGAAAGTGCTTCACTGCTTTCAGCAGAATCTCAATATGAAACTACCACAG CAGAAAATGAGCTTGTGCTGAAGGGGATGTTATCTGAAGCAGCATTTACCCGACTAAAAGAATCTGGAACTGGACTTCACCGCAAGTCAATTCAAGATCT GATTGACTTGTCTCAGAAATATTACATTGATGTTGCTCTCCCAAAACTGGTAGCAGATTTTGGCTCATTGGAACTCTCGCCTGTTGATGGCCGCACCCTA ACTGATTTTATGCATACTAGGGGTCTACGAATACGGTCTCTTGGACATGTTGTCAAGCTATCTGAAAAGCTATCACATGTGCAATCACTTTGTATTCATG AGATGATAGTTCGAGCTTTCAAGCACATCCTGCAGGCTGTGATTGCAGTTGTTGACAAGGAGAAAGTGGCTACTACAATAGCTGGTGCATTGAATTTGCT GCTTGGTGTTCCTGAAAATAGAGAATCAGATAAACCGTGCAAAACCCATCCCCTTGTGTGGAAATGGCTAGAGGTGTTTCTGAAGAAGCGATTTGATTGG GATGTTAGCAACTTGAATTACAATGATGTGAGGAAGTTTGCAATTTTACGTGGGTTATGTCACAAGGTATTGGAACTAGGCCATAAATAAAATTCACAGT CTATGATTGTGTTGGGTTTTTGTTTGTAGATTGCATAGCAATGACATCATACATTTGCATGTTTGTCATATTTCCATATTCTCGGAGTACGCCAGGCTAA ATTTTATGGTTCATCATCACAATTAAATGATGATTGTGATATGTATATCGTGTAGGCTAACTGGATTTTCTTCTTGAATATAGTGGCATTTCTCAGAAGT TGAAATTGTCTGTAATTATTATTTGTTAGTAGAAAAAGAACAAGTTTGCATGATGAATTGCTTCTTTGATGGCCTTTTGATATATAATTGAATTCATCAT CTCATAACAAAGTATTTTAATAGAGCATGCATGTGAACCTTGTGGTGAATTAAATAAACCCACTTTTCTCCTTTACTCTTCTTTTCCTTCAACTGTAATA AATTCCAGATAGAAATTTATGGTAGTTAAATTGTCCAAGATATGCGTATCTTTGTTTCTTTGAAGTATAAATTATCTACTTGTGCTTGTAAAATGGTGAC ATTGAAAAAGATGATGCCCTTCTAAAGAGTAGTTGAAGACATAAAGGTAGACTACTTAGAAGGATAGAGCACTGTGGAATACTAAATTAAAAATCTTATC ACACCATGTAGTCGACCACACTTAGTTTCAATAAGGCTTGGTTGTTTATTGACAATTTGTTTCCCACTATCATGTCTCATCTTCTATTTTAGGTTGGCAT TGAGCTTGTTCCA
• Tissue: flowers
• Gene name: LI_gene_80392;
• Additional information: details;

Expression of Ll_transcript_52190

FPKM

• FPAB: 0
• FPNAB: 0.1
• LF1: 0.3
• LF2: 0.7
• LF3: 0.3
• LF4: 0
• UF1: 0.2
• UF2: 1
• UF3: 0.4
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_52190

• Blastp: Protein TSS from Arabidopsis with 48.82% of identity
• Blastx: Protein TSS from Arabidopsis with 49.05% of identity
• Eggnog: Involved in proper cytoplasmic distribution of mitochondria (By similarity)(ENOG410XQUQ)
• Kegg: Link to kegg annotations (AT4G28080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440436.1)
• Pfam: Translation initiation factor eIF3 subunit 135 (PF12807.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;