| Id Trinity | FTRINITY_DN58821_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_52173 |
| Sequence | TCGACATCGTCGCCTGCACCACCATCTACGGCCCTTCGTCGGCGCCGGAGAAGAATTCCACCACCACCACCACCACCGTCACCACCACCACGAAGTCTCC GGCGGAGGTTGTTGACGGAGACTGTGAGATAAGCCACTCGTGCCCGAAGCTTGGAAGCTTCTACGAGTTTTTCTCTCTTTCGCATCTCACTCCACCACTT CAATATATAAAGAAAACAGTGAAACGACAGGTTCAGGAGATATCAAACGCGGATCATTTCTTCTCCCTTGATGTGAAGCTGTGTAATGGGAAAGTTGTAC ATGTTGAAGCATGCAGAAAAGGATTCTACAGTATTGGAAAACAGAGGATTCTGTGTCATACTCTTGTTGATCTGTTGAGACAGCTTAGTAGACCTTTTGA TGCTGCTTATGATGACCTCTTGAAAGCATTTTCGGATCGTAACAAGTTTGGGAATATCCCCTATGGATTAAGAGCCAACACATGGCTTGTTCCTCCGATT GTGGCACAATCACCATCATTTTTTCCTCCTCTTCCCGTGGAGGACGCAAATTGGGGAGGAAATGGTGGTGGTTTTGGAAGAGATGGGGAGTTTGATTTGA TTCCTTGGGCCAGCGAATTTTCATTTATTGCATCTATGCCTTGCAAGACCTCAGAAGAAAGACAAGTTCGTGATAGAAAAGCATTCCTTCTTCACAGCCT ATTCGTTGACGTTGCCATTTTCAGAGCTATTAATGCTGTTAAACATGTTATGGGAGAACCAGATTTAAGCTCTCCCGTCTCAGAAAATGGGGTTCTTTAT ACCGAGAGAGTTGGTCACATGAGTATCAAAGTCATGAAAGATGCTACTGTTGCAAGTTCTAAAGTTGATACTAAAATTGATGGAGTTGAAGCCACAGGAG TAAATCTAAAGGAACTAGTAGCTCGAAATCTATTGAAAGGAATTACTGCTGATGAGAACACTGCAGCCCATGATACTACCACTTTAGGTGTTATTAATGC GAGATATTGTGGTTATGTGGCTGTTGTGAAAGTTGAGAGTGGAGAAATGGACTGTCCATCTTATCAAAATACTGAATTTCTTGATCAGCCAGAGGGTGGC GCCAATGCACTCAACATTAACAGTTTGAGATTACTTCTCAACACAACACAGTCGGAAAACAGTAGACCAGTTACTGAGATACAAACACTTGAGAATGAAG AGCTTGGAGCCTCCCATGCTTTTGTGGAGAGGCTGATTAAAGAAAGCCTTTCTAAGCTTGAGGAAGAGGAAACAGGTTTGGACAATTTCGTCAGATGGGA ACTTGGAGCCTGCTGGTTACAACATTTGCAAGATCAAAACAACACTGAAAAGGACAAGAAACCATCGTTGGATAAGGCTAAAAATGAAATGAAGGTTGAG GGGCTAGGGAAACACCTAAAAGCCCTCAAGAATAATAAAATTAAATCCGATCTAACTGACCTTAAATCGGCATCTGAAAACTCCAAACCTCCTCATGTGT GTGTTAATCGGGAGGCTGAAAGTGCTTCACTGCTTTCAGCAGAATCTCAATATGAAACTACCACAGCAGAAAATGAGCTTGTGCTGAAGGGGATGTTATC TGAAGCAGCATTTACCCGACTAAAAGAATCTGGAACTGGACTTCACCGCAAGTCAATTCAAGATCTGATTGACTTGTCTCAGAAATATTACATTGATGTT GCTCTCCCAAAACTGGTAGCAGATTTTGGCTCATTGGAACTCTCGCCTGTTGATGGCCGCACCCTAACTGATTTTATGCATACTAGGGGTCTACGAATAC GGTCTCTTGGACATGTTGTCAAGCTATCTGAAAAGCTATCACATGTGCAATCACTTTGTATTCATGAGATGATAGTTCGAGCTTTCAAGCACATCCTGCA GGCTGTGATTGCAGTTGTTGACAAGGAGAAAGTGGCTACTACAATAGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAATCAGATAAA CCGTGCAAAACCCATCCCCTTGTGTGGAAATGGCTAGAGGTGTTTCTGAAGAAGCGATTTGATTGGGATGTTAGCAACTTGAATTACAATGATGTGAGGA AGTTTGCAATTTTACGTGGGTTATGTCACAAGGTTGGCATTGAGCTTGTTCCAAGGGACATTGACATGGATTCTCGTATTCCTTTCCACAAATCTGATAT AGTCAGCTTGGTCCCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTTCTAGAGTCATCAAAAACAGCTTTAGACAAGGGAAAGCTT GAAGATGCAGTTACGTATGGGACAAAGGCTCTTGCCAAGCTGGTAGCGGTTTGTGGTCCTTATCATCGAATGACAGCGGGAGCATACAGCTTACTTGCTG TAGTCTTATATCATACTGGAGATTTCAACCAGGCTACAATTTATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCAGATAC GATGAAGAGTTATGGGGATCTTGCAGTTTTCTATTATAGACTTCAACATACAGAGCTGGCTCTAAAGTATGTAAAGCGTGCTCTATATCTTCTGCATCTG ACATGTGGTCCATCTCACCCAAACACTGCCGCAACATACATTAATGTGGCTATGATGGAGGAAGGTCTGGGAAATGTGCATGTTGCTCTCAGATATCTCC ACAAAGCTTTGAAGTGCAACAAAAGATTACTTGGTCCAGATCATATTCAGACGGCTGCCAGTTATCATGCAATAGCAATAGCACTTTCATTGATGGAAGC ATATCCTTTGAGTGTGCAGCATGAGCAAACAACTTTGAAAATTCTGCGGGCAAAACTTGGCCCAGATGACTTGCGTACACAGGATGCTGCTGCATGGCTT GAGTATTTCGAGTCCAAGGCTTTTGAACAACAAGAGGCTGCACGTAGCGGTGCTCGAAAGCCTGATGCATCAATAGCTAGCAAAGGCCACCTAAGTGTGT CAGATCTGCTTGATTACATTAATCCTAATGATGATGCCAAAGGAAGAGATGTGGCAGTAAAGAGAAGAAGCCAGATAGCAAAGGTATGATCTTAGAAAAG ATCATGGGGTTTACTGATCTTAACTTTAACTCATTAGTTTGAGATCTTTGCATAAAACATTTATAGTAGAATTTTCTAATTACTGCCAACTGTATACTGA CATTGCCAATGAGTTTGGCTAGGTCATTTTTCTGACAGTGTTGTAAGATATAAAAAAACCAATCAACATGGAATGTTCCTCTGGAGTCTCATTTTTTATT TTCAGCTGTTATTACATGAAGCTTCACATTTTTATATTATCGTATAATTGGCTATTTTTGCGGCCTCTTCTATGCATCCTTATCCTATGTAATATAATTC CATTTTGAAAAATTCAATTATTTTGCAGGTGAGGACAAAATCTAACCAGAACAATGGCTCAGCAAGTTCTGACGAGTCTTCAAAAGAAACTTCAAAAGAG ACTTCAGATGAGGATGTACATATACCTGTACCAGGAGTTTCTGCAAATGCTGAGCAGGAGACAAAGTCTGTGCCCGATTCAGAACAGCCTATTTTAGAAA AGACCTCAGATGAAAAACAACATATTTGGGGTAACTCGTCTGAGGCAAATGCTGATGGAGAGGATGGATGGCAACCAGTTCAACGACCAAAGTCTTCCGG TTCATATGGCCAGCAACGGAAGCAAAGACGAGCAACAATTAACAAAGTTTCTTACCAGAAGAAGAATGTGGAATCTGGCACAGACCATCCTTCTGTAAGG AGTACTAATCAGAGTGGGAGATATTACTTTTCGAAGAAGCGAACAATATCCCATGGGAGTTCTACTGATAATCATTCAGAAAACGTAGCCCAGGGCTCTA AATTTGGGAGGAAAGTGGTCAAAGCTGTTACGTACAGGGTCAAGTCCGTTTCTGCAGTTACAGATACTACTGCAAAGGATACATCAAAAATCATAGATCA CCTATTTAGTTCTAACACGGCAGAACTCAGTTCAAATTCTTCATCAAATGATGTCAATCCTGTCAAGACTTCTATGGTTAGTCTTGGAAAATCTCCTTCA TATAAGGAAGTGGCATTGGCTCCTCCTGGGACAATCTCCAAGTTGCAGGTCTATAATCCCCAAAGTGAGATTCCTGGTAGTAATGACCGCGGTGTTGGAA AACATGAAGAGGAAGATACTGAAGCACATGCTAACTCTAACCCAACCGTAGAAGAAGTAAACAATATATTTGAACAGAAGGACGCAGATTTTTCTGAGAA GAGAGACGGAACACAGTTTGCTGATGTTGCACAATATAATCTTGAGAGTGCTAAGAGACTTGAATCTGGGGATGTTGAGGCTCATGAAGCAGCTGATAAT ATCATAATGATTGATGCAGTGGAGGATCCTGTGGATTCTCACAAACTAGAACTTGATACAAGTGCATCTCGCAGTTTTGAAATACCTAATAGTGATACAA ATATCATCTCACAAGAAGGTGATGATTTACGGGTCAATATCTCTCCATCAAGTAAGAAGTTGTCTGCGTCTGCAGCTCCATTCAACCCATCGCCAGGTAT TGCACGCCCTGCACCAGTTTCCATGAACATAACTCTTCCTTCTGGTCCAACCATTTGCCCCTGGCCAGTAAATATGAATGTTCACCGTGGACCTGCTACT TTGTTACCTGCAGTTACCGCAATGTGTTCCTCTCCTCACCATGCATACCCTTCACCTCCGGCAACACCAAACATGATTCAACCATTGCCATTTATGTATC CTCCTTTCACTCAACCTCAATCAATACTAACCACCAACTTTCCAGTTACCACCAGTGCATTTCATGCCAATCATTTTGCTTGGCAATGTAATATGAACCA AACAGTACCTAAGTTTGCTCCCAACCCTGTCTGGCAGGGGTGCCATCCTGTAGAATTTTCTCTTCCAGCACCTGTCCTTGAACCAATTCCTGATCACATT TTGCAGCCACAGGAACAGTGTAATGTTTCTCAAATTCCAGGTTCTACATTGGTTCTTCCGGAGGACGCGAATAATGTCAGGGAATCTAACGAAGAGGTGA AAGTTCTCGAATCAAAGACTAGTGAATATGAGTTTGGTAAAGTTCATCCAGAAATCGTAAAGGAAAATGCTGGGAACATGACAAATCATAATATCGGCTT GAATGAAAGTGTTGGCAATAGTGAAGAGAACTTGGACGGTGGGAAAACTGTCAGCATTTTGATTCGGGGAAGAAGAAACCGGAAGCATTCTTTGAGAATG CCGATAAGTTTGCTTACTAGACCCAACAGCTCTCAGTCGTTTAAAGCTGTTTATAACCGCGTAATTAGAGGAAATGACGCCGTTCCGAAGTCCATCAACT TGTCTTCTGGTAAAGATTGTATAGCTACTGCTTAACTCAGTTCTTATTGTTACTAACAAGAAATAGTAGCAGAATTACTGCTGGTAACGAAGAGAGATAC TTCATAATGTCACATACAGAAGGAGATGTGGTGCTTTAATCATCTTTGGAACTCAATTACAGTTTTCCTGCAGCTGTGTGGCTGCACTACCTTTTGGAAT GTTAGATTCTTCTACATGGAGGTGGATGACTGGAGTTTTTTCTTCAATTTGAGGTTCTTTGCAGTGAGTTTGGGTTACAGAGGTGAACCTTCAATGTAAC AAATTCAGTTAGGAAATTTTGATATTCTGAATTAAATCATTAAAGACAGTTTCTAATTTTTTCTCAGTATTTTTAACACCATTTACAATGACATTGTCAA TTAATTTGGGTCATTTGTATAGACTTATCAATAATTTGCCAGGAATTAGTGGTTTTTTTTGTTGGTTGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80392; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_52173
| Blastp | Protein TSS from Arabidopsis with 59.06% of identity |
|---|---|
| Blastx | Protein TSS from Arabidopsis with 59.15% of identity |
| Eggnog | Involved in proper cytoplasmic distribution of mitochondria (By similarity)(ENOG410XQUQ) |
| Kegg | Link to kegg annotations (AT4G28080) |
| CantataDB | Link to cantataDB annotations (CNT0001002) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440439.1) |
| Pfam | Translation initiation factor eIF3 subunit 135 (PF12807.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |