| Id Trinity | FTRINITY_DN58822_c3_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_52116 |
| Sequence | AAACCGAAGAAGAAGCTGAATTACAGGAACATGATGATGATGATGAAGAAGAAGAAGAAGAATTGGTTGGTAAAGTTAACAAGCTTATGGACAAAATCAC TGCCTCCGTTGATAACCCTAAACCCACCGTTCTTCACGCTCTTGCCTCCATTCTTGAAAATCAAGAGTCTCGGGTTTCTTCCCCATTGATGTAATTAAGG TTTAATTTGCAATGTAGATACATGGAAGAGAATGATCATTTTTCCACAAATAATGGACGTGCTGCTCATAACATTGGGCGTCTTGGAAGTGTTATCAGGG AAAATGATGAGTTCTTCGAGTTAATATCTTCTAAGTTTCTATCAGAAACAAGATACTCAACGTCGGTCCAAGTTGCTTCTGCCAGACTTCTCCTCAGCTG TTCCCTATCATGGATTTATCCTCATGTTTTTGAAGAACCTGTAATAGAAAACATCAGAAATTGGGTGATGGATGATAATGCTAGAGTGTCTGCCGAAGAC CAAAGTATGAAGCATCATCCGAGAAAAACGGAGGTCTCTGATTCTGAAATGTTGAAAACATATTCTACTGGCCTCCTAGCTGTGTGTTTGATTGGTGGAG GTCAAGTAGTGGAAGATGTACTGACATCTGGTTTGCCAGCAAAGCTTATGCGTTATCTCCGCTTACGTGTGCTGGGAGAGACAAGTAGCACTCAGAAAGA TATTGGTCATTCAACAGAGAGTAGGAATGCATCTGGGAATAATTCACTGAGAGGTAGAGATGATGGTCGCAGTAGATTTCGCCAGCTCCCAGAATCTAGT CATTTGGATGATACAAGGATGACTGATGAGAAATCTTTAGAAGACCAAATTCTTGAAAGGGGTCCAGATAGAAACATTGGTGAACAAAATTGCCAAGATA ATTCTTGGGTAGGTGGTGAACCACCTGATGGGCTGGGTGAAGATGGTGATATCTGCGACGTAGATGCTGATGGGGAGGATAGATGGCACAGCAGAGATAC ACATGATGGAAGGATAAAGTATGGTGAGCATGATGACAATGTTAATGACTCTTCAAGGCGACGTTCAAAATGGGGAAGATCCCGAGGGAAAGCAAGGGTC AACGAAAGTACTGTGGAAAGTGAAACTGTTTTGTTATCTCCTGGCTCTGGTAATCGATTAGGTCAGGGACGAAGTGCTCAAGATAGGAGCATATTGAGGA ATGCTGGTGCCAGGAGGGTGCCTGATTCTAAAAAGACTTATGCGAGGGCCAGTACTGAGGCTTCACTTTTGGAAAGAGACGATAATGATGACTGTTTCAA AGAATGCCAAATCGGAAGTAAAGATATTTCTGATTTTGTTCGGAAAGCTGTCCGAGCTTCTGAAGCTGAAGCTAGATCAGCCAACGCACCTGAAGAAGCT GTCAAAGCAGCAGGTGATGCTGCTGCTGATCTTGTTAAAACTGCAGCTTCAGAGGAATTTAAATCAACTAATGATGAACAAGCAGCTGTTTTGGCCGCTT CAAAAGCTGCAGAAACTGTTATTGATGCTGCATCTGCAGTTGAAGCTTCTAGGAGCTCCATTGGCATCAACTCTGAGGCAGAGAATGTGAGTTGCAGAGA AACAGACTCTGGTGAGGATGTGGAAGATTACTTCATCCCAGATGCCCAATCACTTGCAATATTGAGGGAAAAATATTGCATTCAGTGTCTTGAATTGCTC GGAGAATATGTAGAAGTTCTTGGCCCTGTGTTGCATGAGAAAGGGGTAGATGTTTGTCTTGCACTTCTGCAGCAGAATTCTAAAAACCAGGAAGCATCCA AGGTTGCCTTACTGTTGCCTGATGTCATGAAGCTGATCTGTGCTTTGGCAGCTCATAGGAAATTTGCTGCACTATTCGTGGACCGTGGTGGAATCCAAAA GCTCCTTGCTATCCCTAGAATGATTCAAACTTTCTTTGGCCTTTCTTCTTGTCTATTTACTATTGGTTCTCTTCAGGGGATAATGGAACGGGTTTGTGCT CTTCCATCAGATGTTGTTTATCATGTGGTTGAGTTGGCTCTCCAACTCATTGAGTGCAACCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTG CTGCATTTGTCTTCAGAGCCGTTCTTGATGCTTTTGATTCCCAAGATGGATTACAGAAATTACTAGGGCTTCTAAATGATGCTGCTTTGATAAGATCTGG AGTAAATTCTGGAGCATTGGGCTTATCTAACACAGGGTCACTTCGAAATGATCTGTCGTCTGCAGAAGTGCTGACATCATCTGAGAAGCAGGTAGCCTAC CACACCTGTGTTGCTTTGCGACAATATTTCAGAGCACATCTCCTCTTATTAGTGGATTCTATTCGTCCCAACAAAAGTAATCGTAGTGCTGCTAGGAATA TTCCAAGTGTCAGGGCTGTGTACAAGCCGCTTGACATTAGTAATGAGGCTATAGATGCAGTATTCTTACAATTGCAAAAGGATCGGAAGCTTGGTCCTGC ATTTGTGCGAACACGTTGGCCACCAGTTGAGAAATTCTTGGCATCCAACGGGCATATTACTATGTTGGAATTGTGTCAGGCCCCACCCGTGGAGCGATAT CTTCATGATTTGCTTCAGTATGCACTGGGTGTTCTGCACATTGTTACATTGGTGCCTAGCAGTCGTAAAATGATTGTAAATACAACATTAAGCAATAATC GTGTTGGTATAGCTGTAATTTTGGATGCAGCAAATATTGTTGGTAGTCATGTGGACCCTGAGATAATTCAGCCAGCATTAAATGTTCTAGTCAACCTTGT TTGTCCTCCACCTTCAATCAGCAATAAACCGACTGTAGTTATGCAAGCTCAACAGTTTTCTTCTGCCCAAATCACGAATGGTCCTCCTTCGGAGAGTAGA GATAGAACTGCACAAACCAGTCAGATTGAACCTAGGGAGAGGAATGGGGAAACCGGTGCTGCAACTTCAGGACTGGTTGGGGACCGCAGAATATCTCTGG GTGCAGGAGCAGGTTGTGCTGGCCTTGCTGCTCAACTGGAACAAGGATATCGCCAAGCAAGAGAGGCTGTTCGGTCTAATAATGGTATAAAGGTTCTTCT TCATCTCCTCCAACCACGTGTATATTCACCTCCTGCTGCTTTGGACTGTCTTCGTGCTTTATCATGCCGAGTCTTGCTTGGATTAGCCAGAGATGATACA ATTGCACACATCTTGACGAAGCTTCAGGTTGGGAAAAAACTATCCGAATTAATTCGGGATTCTGGTAGCCAAACACTGGGAACAGAGCAGGGTAGATGGC AAGTTGAACTTTCACAGGCTGCAATTGAGCTAATTGGGATTGTGACTAATTCGGGGCGGGCAAGTACATTAGCTGCTACAGATGCAGCTACTCCTACCTT AAGGCGCATAGAAAGAGCAGCAATAGCTGCTGCCACTCCTATCACATATCATGCAAGGGAACTTCTGCTTCTTGTTCATGAACATCTGCAGGCATCTGGA TTGTCACAAACTGCTTCATTGTTGCTTAAGGAGGCTCAGTTGACTCCTTTGCCATCATTGATTGCTCCATCTTCTCTTGCGCAACAACCTAACACACATG AAACTTCCTCAATACAAATTCACTGGCCCTCTGGTCGTGCTCCTGCTGGACTTCTCACTAACAAGTTAAAGGTTAATGCTAGTGATGAGGACACTAGCTT GAAAATTGATACTGTCTCTGCAAAGAAAAAATCACTGACTTTTTCAGCTTCTTTTGGTACTCATTCGAGACATCAACTTTTTGATTCTCCGCAGTCATCA GGCAGAAAATGCCTTGGTACATGGAAAGAATCTTCAGAAGCTAGTATAGTGGAGAATCCTGAATCTTCAGTGAAACATAGTAGTGATGCTGTATTTAAGA CTCCAATGTTTCCAATGAAACGTAAGTTATCTGATGTGAAGGATATAGGAATACTTTCATCATCTGGAAAGCGACTAAATGTTGGGGATCAAGGACTTCG TTCTCCTATTTGTTCGAGTGCAATTCGTAAAAGCGGCCTGAAGACTGATGCTGTTGGGTTTTCTACACCAATTTCTAACCTAAGAAGTCAACAAAACCGT TGTACAGCTGACTATGTGGATGATAATCAATACAGTAACTCAAATCTAGGTCAGATGACACCATCTTGCCAAGTTTTCAGTGACATTCAGCTTAACAACC CAGAGCGCATAACATTAGATTCTTTAGTGGTTCAGTCTCTGAAGCATCAGCATCGCCAATGCCCAGCCCCTATTACCACTCTTCCTCCACTCTCTCTTCT ACACCCGCATGTTTGTCCTGAACCAAAGCAAAGCCTCGACGCCCCTTCTAATGTCACAGCTCGTCTTGGCACACGTGAATATAAGTTTATGAACGGTGGA GTTCATGGGAACCGAAGAGATCGTCATTTTGTTTATAGCCGGTTTAGACCATGGCGCACTTGTCGGGATGATGCTGGTGACTTGTTAACATGTGTTACCT TTGTTGGGGATTCCTCTCATATTGCTGTTGGGAACCACAATGGAGAGCTCAAATTTTTTGACTCCAACAATAGCAGTGTGGTGGAGAGCTTCACAGGTCA CCAGAACCCTTTGACCCTAGTTCAGTCTTTTGTTTCTGGTGACAATCAGCTATTGCTGTCTTCAAGTTCCCAAGATGTTATGCTGTGGGATGCAACTTCA ATTTTAAGTGGCCCTACCCATTCATTTGAAGGGTGCAAGGCTGCCAGGTTTAGCAATTGTGGCAAAGTTTTTGCAGCCTTGTCATCAGAATCTGCACAAC GGGAAATCCTCTTGTATGATATCCAAACATGTCAGTTAGAGTTGAAGTTGTCAGATACACCTGAAGCTTCTACAGGGAGGAGTCATGTTTATTCTTTAAT TCACTTTAGCCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTATGGGACCGGCGGGTTTCTGGGCCTGTTCATCGCTTCGAACAGTTAACAGACTAT GGGGGTGGAGGTTTTCATCCTGCTGGCAATGAGGTTATTCTAAACTCTGAAGTCTGGGATTTGCGGAAGTTCAGACTACAACGTAGTGTACCTTCATTAG ATCAAACTTCAATAACATTCAATGCATCTGGTGATGTAATGTATGCAATATTGAGGAGAAATCTTGAGGATGTAATGTCAGCAGTTCACAACACACGTCG TGGCAAGCATCCACTCTTTGCAGCTTTCCGCACATTGGATGCAATCAATTATTCGGACATTGCTACTATCCCCGTGGATCGCTGTGTTCTTGATTTTGCT TCCGAGCCAACAGATTCATTTGTTGGGTTGGTCACTATGGATGACCAAGATGAGATGTATGCATCAGCAAGAATCTATGAAATTGGTCGCCGGAGGCCAA CCGATGATGATTCTGATCCCGATGATGCGGAAAGTGAGGAGGAAGATGAGGACGATGAGGATGATGATGATATTGACATAGATCCTCTCTTAGGCCCTGG TTTTGACGGGGACAGCGAGAGTGATGCTGATGACACGAGTAATGATGAAGACGATGATAGTATAAGTGACATTGGTGAAGATGGAGATTTCATATTGGAT GATGTAGACTTTGATGGAGGAAATGACATGTTGGATATTGTGACAGAAGGTGATGAGGATGAGGATGATGATGATAGTGAAGGATATGAATCTTTAAGTA GTGATGAAGAGGATTATGTGAATAATCGTAATCGCTTTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80402; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_52116
| Blastp | DDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 56.81% of identity |
|---|---|
| Blastx | DDB1- and CUL4-associated factor homolog 1 from Arabidopsis with 56.05% of identity |
| Eggnog | Vpr (HIV-1) binding protein(ENOG410XR8C) |
| Kegg | Link to kegg annotations (AT4G31160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415007.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |