Id Trinity | FTRINITY_DN58823_c1_g1_i3 |
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Name Transcript | Ll_transcript_49702 |
Sequence | AAAATATGGGTAACTTTTTATATATTTTATATGTTGACTTTATATGATGCATATTTTAATGGTCTATGCATGTTCAAGTGATAAAGTCAATGGCAATCAT GTTAGTTTATAGTTAAACCTTAATTTGTTGAGGATGAAAATTTTGGTCTTATAGTACATCCAATTGTGACTTAAACAATAACAACAAGGGAAAAGTTTAT AAACCTCCTTAACATTCTATGATATGCATGCAATTTAGTCCCTAAAAATTTATAGATATGTAAAAAAGGACCTTAAACATTGTTGAAGGGGTAAATTAGT TTTCCATTCTTCAAAACATCCTCCTCTGAACTTTGCACCATGCTTGACTTGGTCTCGATCTATCGAATTTTTGGTATAACCAATGGTAAATTTTAATCCT TTTGAGGGCAAATGAGCTTTTTGCACCTGAGAGTTTATGATTTTTTGTACATATTTGTGTACCTCAAGGACTATAAGTTTAGGACTGTTTTGTGACTAAT CCATAATAATTAAAGAATATATTAATAACAATGGTATCAAGCTTTGATACACTTTCTTTTTTGTTGTTGCATAGGGATGAAGTTAAGCTTATAGAAGAAG TTGTGAAAAGTTTGTTGGCAAGGTTGAATCTTATGTACCAAAGTGAGTTAACAGACCTTGTTGGAGTTGAAGAACGGATCGCAGATATAGAGTCACTATT GTTCCTGAAATCGACAATAGATGTTCGCGTGATTGGGATTTGGGGCATGGGAGGTATTGGTAAAACAACAATTGCAGCTGCAGTATTTAACCGTTTGTGT TTTGAGTATGAAGGATGTTGCTTTATGGCAAACATAAGAGAAGAATCAGAGAAACATGGAACTATTTCTTTGAAGAATAAGATCCTCTCTATACTATTAA AGGAAAATGATCTATATATCGGTACGCCTAATGGAGTTCCTCCTTATGTAAAGAGAAGGCTGCGTCGTAAAAAGGTTCTTGTTGTTCTTGATGATATTAA TGACTCAGAGCAACTAGAGAATTTGGTCGGAGAACTTGATTGGTTCGGACCCGGTAGCAGAATCATTGTGACAACAAGAGATAAACAAGTGCTTGGTAAA AGAGTTAATAGTATCTATGAGGCTAAGGCATTAAAATTTGATGAAGCTGTTAAGCTTTTCATTATGAATGCTTTCAAACAAATTAGTTGTCTCGACATGG AGTGGATTGAGCTATCAAGAAAGGTGATTCAGTATGCTAATGGAAATCCATTAGCTTTAAAAGTTTTGGGCTCTTTTCTTTACGGTAAGACGAAAATAGA GTGGGAAAGTCAATTGCAAAAGCTTAAGAAAATGCCGCATGCAAAAATTCAGAATGTTTTGAGATTGACTTTTGATAAGTTGGATAGAGAAGAGAAGAAC ATATTTCTATATGTTGCATGTTTTCTGAAAGGATATGAATCACACCGAATAATAGTTCTGCTTGATGCTTGTGGTTTCTCAACAATTATTGGGCTAAAAG TCCTTCAAGACAAAGCCCTTATAGTTGAAGCCAAGGGATCAGGAAGATCAATTGTATCAATGCATGATTTGATACAAGAAATGGGTTGGGAGATTGTTAG AGAAGAATCTATCGACGACCCGGGAAAACGCAGCAGGCTATGGGATCCTACTGATATTCATCAAGTATTGAAAAATAATACAGGAACTAAAGCCATTAAA AGCATAACTCTGAATGTGTCAAAAATTGGTGAACTGTGCTTAAGTCCTCAAGTCTTTGATAGGATGCAACAGTTAAAATTTCTTAACTTTTCCCAACCTT ATGGTGATGAGCAAATCTTGTATCTTCCTCAAGGGCTTACATCTTTGCCAAATGACCTAAGACTTTTTCATTGGATTAGTTATCCTTTGAAATCCTTGCC TACTACATTCTGTGCAGAAAATCTTGTTGAGCTCAACTTGACTTGGAGCAGAGCCGAAAAACTTTGGGATGGAATCCAGAACCTTCAACATTTAAAGAAA ATTGACCTCAGTAATTCCAAACATTTGCTAGAGCTACCGGATTTTTCAAAGGCCACAAATCTTGAAGAAATAGAACTATTTAGTTGCAGAAATTTGCTTA ATGTTCATCCATCTATTTTATCTCTCCACAAGCTTGTAAGATTAAACCTGTTTTTTTGCAAAGCACTCACCAGTATCCGAAGCGATACTCATTTAAGATC CCTCCGCGATCTCTTCCTCGGTGGTTGCTCAAGGCTCAAGGAGTTTTCACTGACTTCAGAGAACATGAAAGACTTGAACTTAAATTCAACTGCTATCAAT GAATTGCCATCATCAATTGGGAGACTAAAAAAACTTGAAACTTTGACACTTGATCACTGCAAAGGCCTAAACAATCTTCCAGACAAGGTTGCCGACCTTG GATCGCTACGTGTTCTTCGTATATATGGTTGCACACAACTTGATGCATCAAATCTGCATGTCTTATTCAATGGTTTAAGGTCTTTGGAAACACTACTGCT AGAGGAATGTCTTAACTTACATGAAATTCCAGACAACATAAGTCTCCTATGTTCATTGCATCATTTGTTACTGAAAGGAACAAATGTTGAGAGATTCCCT ACAAGCATTAAGCATCTTACAAATCTAGAAAAGCTTGACTTAAGTGATTGCAAGAGGCTTCATTTTCTACCAGAACTTCCACTATCCATAAAAGAGTTAT ATGCCACTAATTGCTCATCTTTGGAGACTGTAATGTTCCCTTTGAGGACTACTGATCTAGTACATGCATACAAGTCATACACTACATTCCAAAATTGCAT AAAGTTGGATAAACATTCACTCAATGCTATTGGAGTAAATGCACATGCCAACATAAAGGAATTGGCATATGAACATCTCTCAAATATTGGAACCAAGTTC CTTGATGGTCCAGCTTATGTTATCTACCCCGGAAATGAAGTTCCAGAATGGTTCAATGACAGAACAACACAAGCTGCAGTAACCATTGATCTCTCTTCTG CTCCTTCATGTTCCAAGGTTATGGGCTTCATATTCTGTGTCATTGTTGGTAAGTTTCCGTCGAATGACAAGAACTTCATTGGATGTGACTGCTACCTAGA AACAGGTAATGGTGAAAGAGTTAGCCTTGGACACAAGATGAATAATGCATGGTCTAGTATACATGCTTGTGACTTTGTTTCTGATCATGTGTGCATGTGG TTTGACGAACAATGTTGTCTGCAAAACCGCGAGCGCGAAAGCGAAAGCGAAAGCATGGAAGAAGCTGTGGCAAAGGTTACATTTGAGTTTTTTGCTCAAT CTGGTAGTACTTGGGAAAAAGAGAATGATATTATGATAAAAGGGTGTGGAGTGTGTCCAATATATGACTCAGAATATCATGATTTCATCAAACAAATGGA GCTAGACTTGACACTGCAGAATGAAACACAATATCTGAAACAGAAATGCAAGACATTCATATTTCCACCACTACAAATTGAAAACTGGAAGAGTGCAACA CAAGGCTTGAAGGAAATATTGTTTCTATGATTTATTGAAATATAAGTGCACCTTTTTTCTTGTATTTGCAAAACAAATCAAGAACATTAACATCAGTTTG GTGCTCCTCAAATAATGATATAATAAATGGAATTATCTTGTATTTGTATCATTCTAATATAGCTACAAATATTATATGTTAAATTTCAATATAGGAAAAA ATATTGCTATTCAATTATTTGTGTTAAATAAGTCTATTTTTTATATAAAGAAGAATATCC BLAST |
Tissue | flowers |
Gene name | LI_gene_80407; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_49702
Blastp | TMV resistance protein N from Nicotiana with 34.6% of identity |
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Blastx | TMV resistance protein N from Nicotiana with 32.89% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436492.1) |
Pfam | NB-ARC domain (PF00931.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |