Ll_transcript_49717

• Id Trinity: FTRINITY_DN58823_c1_g1_i7
• Name Transcript: Ll_transcript_49717
• Sequence: CTCAATTATTAGAAACTTAGTCTGGTTTAATATCAAAAAAATTGTATCTTTGGATTTCTTGTCCTAAACTAAAGTTAGCATCAAATATCATAGTCAATTA TCATAATATATTCATAATTCTGCACTTTCTTTATTGTTCCTTCTCAAGCACAAGATTTTAATCTCATCTCCATTCATTCATACTGGTTGCAGACAGATTA TACCTTAATATATATGGAGGAATCTCTATAGACACAACCTTCAAGTGTATAGATCCACTCGCGGGTTGTTCTAGCTTAATCAGAGGTCTCGAGTTTGAGT CAGGCAGACGTAGTTGTCTATAGTGGTCTTACGACTCGAACAGGCTATTCAATGGAATCTTCATCTTCTTCTAGTGTTACTCAAATCAAATATGATGTGT TCATCAGCTTTAGGGGCACAGATATAAGGTATGGTTTTCTTAGCCATTTGAAAAAGGAGCTAAGGCAGAAACAGGTTGATGCTTATGTGGATGATAGGCT TGAGAGTGGGGATGAAATATCACCTGCACTTGTAAAAGCCATTGAACAATCACTTATTTCTTTGATCATATTCTCAAAAGACTATGCTTCTTCAAAGTGG TGTTTGGAAGAGCTTGTGAAAATAGTTGAGTGCATGGAAAGGAATAAACAAATTGTTATTCCAGTTTTCTACAATGTTGATCCATCTGATGTACGGCATC AGAAGGGGACTTATGGAGATGCATTTGCTATACATCAGAAAAAGAAAAGGAATCTGTCTAAGTTACAAAATTGGAGATCTGCTTTGAATATAGCTGCCAA TCTTTCTGGATTTCATTCATCAAAATATGGGGATGAAGTTAAGCTTATAGAAGAAGTTGTGAAAAGTTTGTTGGCAAGGTTGAATCTTATGTACCAAAGT GAGTTAACAGACCTTGTTGGAGTTGAAGAACGGATCGCAGATATAGAGTCACTATTGTTCCTGAAATCGACAATAGATGTTCGCGTGATTGGGATTTGGG GCATGGGAGGTATTGGTAAAACAACAATTGCAGCTGCAGTATTTAACCGTTTGTGTTTTGAGTATGAAGGATGTTGCTTTATGGCAAACATAAGAGAAGA ATCAGAGAAACATGGAACTATTTCTTTGAAGAATAAGATCCTCTCTATACTATTAAAGGAAAATGATCTATATATCGGTACGCCTAATGGAGTTCCTCCT TATGTAAAGAGAAGGCTGCGTCGTAAAAAGGTTCTTGTTGTTCTTGATGATATTAATGACTCAGAGCAACTAGAGAATTTGGTCGGAGAACTTGATTGGT TCGGACCCGGTAGCAGAATCATTGTGACAACAAGAGATAAACAAGTGCTTGGTAAAAGAGTTAATAGTATCTATGAGGCTAAGGCATTAAAATTTGATGA AGCTGTTAAGCTTTTCATTATGAATGCTTTCAAACAAATTAGTTGTCTCGACATGGAGTGGATTGAGCTATCAAGAAAGGTGATTCAGTATGCTAATGGA AATCCATTAGCTTTAAAAGTTTTGGGCTCTTTTCTTTACGGTAAGACGAAAATAGAGTGGGAAAGTCAATTGCAAAAGCTTAAGAAAATGCCGCATGCAA AAATTCAGAATGTTTTGAGATTGACTTTTGATAAGTTGGATAGAGAAGAGAAGAACATATTTCTATATGTTGCATGTTTTCTGAAAGGATATGAATCACA CCGAATAATAGTTCTGCTTGATGCTTGTGGTTTCTCAACAATTATTGGGCTAAAAGTCCTTCAAGACAAAGCCCTTATAGTTGAAGCCAAGGGATCAGGA AGATCAATTGTATCAATGCATGATTTGATACAAGAAATGGGTTGGGAGATTGTTAGAGAAGAATCTATCGACGACCCGGGAAAACGCAGCAGGCTATGGG ATCCTACTGATATTCATCAAGTATTGAAAAATAATACAGGAACTAAAGCCATTAAAAGCATAACTCTGAATGTGTCAAAAATTGGTGAACTGTGCTTAAG TCCTCAAGTCTTTGATAGGATGCAACAGTTAAAATTTCTTAACTTTTCCCAACCTTATGGTGATGAGCAAATCTTGTATCTTCCTCAAGGGCTTACATCT TTGCCAAATGACCTAAGACTTTTTCATTGGATTAGTTATCCTTTGAAATCCTTGCCTACTACATTCTGTGCAGAAAATCTTGTTGAGCTCAACTTGACTT GGAGCAGAGCCGAAAAACTTTGGGATGGAATCCAGAACCTTCAACATTTAAAGAAAATTGACCTCAGTAATTCCAAACATTTGCTAGAGCTACCGGATTT TTCAAAGGCCACAAATCTTGAAGAAATAGAACTATTTAGTTGCAGAAATTTGCTTAATGTTCATCCATCTATTTTATCTCTCCACAAGCTTGTAAGATTA AACCTGTTTTTTTGCAAAGCACTCACCAGTATCCGAAGCGATACTCATTTAAGATCCCTCCGCGATCTCTTCCTCGGTGGTTGCTCAAGGCTCAAGGAGT TTTCACTGACTTCAGAGAACATGAAAGACTTGAACTTAAATTCAACTGCTATCAATGAATTGCCATCATCAATTGGGAGACTAAAAAAACTTGAAACTTT GACACTTGATCACTGCAAAGGCCTAAACAATCTTCCAGACAAGGTTGCCGACCTTGGATCGCTACGTGTTCTTCGTATATATGGTTGCACACAACTTGAT GCATCAAATCTGCATGTCTTATTCAATGGTTTAAGGTCTTTGGAAACACTACTGCTAGAGGAATGTCTTAACTTACATGAAATTCCAGACAACATAAGTC TCCTATGTTCATTGCATCATTTGTTACTGAAAGGAACAAATGTTGAGAGATTCCCTACAAGCATTAAGCATCTTACAAATCTAGAAAAGCTTGACTTAAG TGATTGCAAGAGGCTTCATTTTCTACCAGAACTTCCACTATCCATAAAAGAGTTATATGCCACTAATTGCTCATCTTTGGAGACTGTAATGTTCCCTTTG AGGACTACTGATCTAGTACATGCATACAAGTCATACACTACATTCCAAAATTGCATAAAGTTGGATAAACATTCACTCAATGCTATTGGAGTAAATGCAC ATGCCAACATAAAGGAATTGGCATATGAACATCTCTCAAATATTGGAACCAAGTTCCTTGATGGTCCAGCTTATGTTATCTACCCCGGAAATGAAGTTCC AGAATGGTTCAATGACAGAACAACACAAGCTGCAGTAACCATTGATCTCTCTTCTGCTCCTTCATGTTCCAAGGTTATGGGCTTCATATTCTGTGTCATT GTTGGTAAGTTTCCGTCGAATGACAAGAACTTCATTGGATGTGACTGCTACCTAGAAACAGGTAATGGTGAAAGAGTTAGCCTTGGACACAAGATGAATA ATGCATGGTCTAGTATACATGCTTGTGACTTTGTTTCTGATCATGTGTGCATGTGGTTTGACGAACAATGTTGTCTGCAAAACCGCGAGCGCGAAAGCGA AAGCGAAAGCATGGAAGAAGCTGTGGCAAAGGTTACATTTGAGTTTTTTGCTCAATCTGGTAGTACTTGGGAAAAAGAGAATGATATTATGATAAAAGGG TGTGGAGTGTGTCCAATATATGACTCAGAATATCATGATTTCATCAAACAAATGGAGCTAGACTTGACACTGCAGAATGAAACACAATATCTGAAACAGA AATGCAAGACATTCATATTTCCACCACTACAAATTGAAAACTGGAAGAGTGCAACACAAGGCTTGAAGGAAATATTGTTTCTATGATTTATTGAAATATA AGTGCACCTTTTTTCTTGTATTTGCAAAACAAATCAAGAACATTAACATCAGTTTGGTGCTCCTCAAATAATGATATAATAAATGGAATTATCTTGTATT TGTATCATTCTAATATAGCTACAAATATTATATGTTAAATTTCAATATAGGAAAAAATATTGCTATTCAATTATTTGTGTTAAATAAGTCTATTTTTTAT ATAAAGAAGAATATCC
• Tissue: flowers
• Gene name: LI_gene_80407;
• Additional information: details;

Expression of Ll_transcript_49717

FPKM

• FPAB: 1.8
• FPNAB: 1.7
• LF1: 0.6
• LF2: 0.5
• LF3: 0.4
• LF4: 0.2
• UF1: 0.4
• UF2: 0
• UF3: 0
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_49717

• Blastp: TMV resistance protein N from Nicotiana with 36.75% of identity
• Blastx: TMV resistance protein N from Nicotiana with 35.28% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436492.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;