| Id Trinity | FTRINITY_DN58824_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_49835 |
| Sequence | CTAGGCTCAACTATAGTTTGACTTAATGGTTTAAAATTGTTTATTTATTTTGATGTAGCCCATTGCCTTCCCAAATAAAATATATAACCACATTAGGGTA ATAGGAAAGGTAACATTTTGGGGGTCCGCCCCTCCTTCACACCAAAAAAAAGGTAAGATCGAAAATTGTATAATTATGATTGTGTTTATTTATATTTAAT AATAGGAAAGGGTTGGATGGTTTGCACGTGGCAAGAGAAGTAGCATCGCCGACGCTGATGCAACTTAACAGATCTGGCTTGCTATCTTTCTTCTTCTTCT TCGTCTTCTTCTTCTTCAACAATTCCATTGGAAGAAATAATAAATAAATATAATTGTGAGTGATGTCAGATTCAGTGTCAATAAAAGTAGTACCTTACCA GAATATAAATAAAGAAGTGGAACTTGTTGACGTTGATGAACCTCGTCACCGGATCGATCTTAATTCTCCGTCTTATTCTTCTTCTTCTTCTTCCTCTCCC GTAGTAGACCATCTTATTCATCTCATTCAACAAAATCCTTAAAACCCTAACCCTAATATTGTATCAAATCATGGCTCATGATTCACGTCGCAATCATCAC CGATCGTCTTCTCCCGATAACGTCGACAAATCCTCCAAACGCCACAAGCACCGCCACCACTCTCACCGACACCATCACAGCAAAAAACGCGATGAAAAAA TTGAAAACGATGTTGAAACAGTTGCTGTTGTTCCTTCTCCAATTCCCGATCCGTATATCCGTCTCACTCGTGACGATGTAGAGGAGGGAGAGATTCTCGA AGAGGATGACGATGTTGCAAAAAAGCACTCGGAAACTGAGACCGAACATGGTGAAATCGAGGTGATTGGAGATCGAGATTCTCGATCTGATAAGAAAAAT CTGGTATATCTCTTTCGGTTTTATCTATCCATTATTTATTTATTTAATTTAACGGACATTGCTACATGTGACACCTGTTTGGTTGCTGAGAAAGCAGATG CCATTTTAATCGATTTCAATTAGGTTTTTGCTTTTGTTATTTTTTAATAAGACCAGAGTTTATATATGTTTGAAATCTAATGTAATAGTAGTAGGTGTTT CAATGCATCTGACTTTATCTCGGTGACCAAACAGAGCACTTTGATTATGTATTCTGAATTTGTATAATCAGTTTTTTTTATTCGTGAGTGCTTGGTAGAG TTCCCATTCAGTGTCATAGATATGTAAGAACCTGCTTGCACTACACGAACATGAGTGAATTGCAAAAGAAGTCTCCCTAGGCGTTTCAGTGAAGACTGGT GGCTTACAGTTAATTTGGACTTTTGACTAAAAGTTCAAAAACTAGAAGTGAAGATATTGACAATGATAAGGTTATTAGTCATGAAGATAATGGGTCTCCT AATCGTTCAACCACTGGGCCTCAGGATGGGAAGGATGCCGGATCTAGATCCGATGGTGCAGGCAATGGGCATTTGGATCCTAAATTTTCCAAAGGGGATA AGTGGCAGAACAGGGAACTTGGAAGTCTTAAAGGAAATGAGAAACTAAAAGATAACTACGACAATGAAGCAATTGGGGCTAATGGGGGAAAAGTCAATAA CCGCTGGAATTCGTCCTCAGAAAGTGGAGAAGAAAAGTATAGAGTGGCAAGAAATTCTCCTCATGATAGATACAGAAGTCGATCAAGATCAATTGGTCAT AATAGGGAAAGGTCTCGATCTCAAAGTATAGTAGATGAACATGCTCATTCTAAGAGAAGGCACTCTGGGGAACAAGGGACCCATGATTATATCAACAGAC ATAAGACTGACTATGATGAAGAAAGAATGAAGCCATGCCGAAAGGAGCATCATCATCGCAGTATAGATTTGGTGGTAGATGATAGAAGGGAATACATCAC TAAATATCACAGTAGGGAAGCCCGGGATAGGGATAGAAGTAGGGACATGGGTGTGGATAGAGATTTAGACAGGGAACGTAAAAGAGGGGAAAGAATCAGG AGTAGGGAGGTTGATTGGGTCCGTGGAACAGAGAAAGAACGTGGAAGGAGCAAGGAGAGGGATAGAAGGGATGTTGAAAAAGTTCAGATCAGGGAAAGGG AGAAGGCTAGGGATAGAAGAGGAGAAAAGGACATTGAAAGAAGCTGGGAGGCAGTGTACGGGAGGGACAGGAGAAGGGGAAATGAGAGAGATAGGAGTGT GGATAAAACACGGGGTGGTGAGAGAGAAAGAGAGTGGGAGAGTGAAAGAGGTGATGTAAATCAGGAAAGGTATAATGTTAGGGAGCGAGAGAGGCACTAT GATAGATATCGGCAAAGGAGTAGAGACAATGCCAATGGTGAGGGTAATGATCTGCATCATGAGGATGGTAATGACAATCGAGATAGATATAGAAAACATT CAAGACATGAAGAAACTGACTACCATCAGGAGACAAAAAGAAATTCTGATCCTGTAAAGGCTTTTAAATCTGTGGGAAGTATCATGGAAGAGGATGAATG CCAACTAGAAAGAGGTGAGATTGAGGATGACATAGATGAGGATGCATTGCAATTACCTGAACAAGAAGAAGATCTCAACAGAATTAAAGAGGAGAGTAGG AGGAGAAGAGAAGCCATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTTGAACAAGTGGTCGAAAATGAAGGGAAAGGTATTATCCCTCCTTATCTGT GTAGGTCATTGTGATAGTATCATAACAACTAATAATAATTAAAATTATCTTCGATTATTAGTTAAAATTGATTCCTATATTTGATCTTGCTGCACAGTAG ATTGTCCTTATCTATAGTCCACTCGTCACAATTTTGATTTTCAATTGACCACTACATATTTTAGATCACATGTCAATCAAAAATGCCTTTTTTTGTTGCA AGATAGTCAGAAAAATCTAAAGCATAACATGTAACAATTTCTATGGAGCTGCATGTGTGGATATTTAAGATCCCCCCCCAACTATTGAGACCTAAAATGT GATTCTGTGTTAGGAGCCAAGTTATGTCCCCTACTCTTCGTGATGGAAGAGGCATTGTCATTGGTCCCAATACCATTCATATTTTTGCTCGAGTTTGTTA AAGATTATCTTTACCTCCATTGATTGTATGTTCTGTGTAATACTAAAGTGTAAATGTTTGGTTAAGCTGTCTATTTGTATATTTTAAATTGAGCTGGACC TAATGAGGTTTCATATTTGAGCCTCGTAGTTGTCTTTTCTATGATCTTTTTTCTCTTTTATTATTGGTTTCTCTTCAGAAATAACTTTTCTTAACTTGTA CCATTTTAGCTACATGTTTCTCTGTTTTCCCATTGAAATTAAGCATACGAGTCAGTGAAATATGTGATATTTAGGGTCAGACCTGATGTACCCCATTAAA GATCCATTAGTCCGTAACTCCAATAATATACGAGATTATCATGGCACTGAATTCTGAAATCAAGAAGACTTGGAAGTTTGCTGTAATCACATGTGTTATT GATACAGAACCTATGGACATTACTGAAGCACTTGATGGTAAGAATGACGCTGATGATTCAGAAACATCATTTGCAGTTGGGAAATCTCCTGAAAATTTGA AAGTTGCTTCTGAAAAAATATATGGTGCTCATGGTCTGGGAGAGGGAACTCCAAAGAGCGAGAGATCAGATGACAAATTTTGTGATGATATATTTGGTGA GACACCAACTGGAGTCCGGAAATCTGGGAAAGGAGATGGTTTACTAATTGAAAAGGTTGGACTCCATGACAATTGGGATGATGCAGAGGGCTATTACAGC TATCGTTTTGGTGAAATACTCGATGGCCGATATGAAATCACCGCTGCACATGGGAAGGGTGTCTTTTCAACAGTTGTTCAGGCAAAGAATCTTAAAACCG GTAATGGAGAACCAGAAGAAGTAGCTATAAAAATTATTCGCAACAATGACACCATGTACAAGGCAGGTATGGATGAGTTGATCGTATTGAAGAAATTAGT GGGTGCAGATCCGGATGATAAGCGCCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAACATGAAT CTTCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAAGCGCTGTGAGAGCATATGCAAAACAACTATTTATTGCACTGAAGCATCTAC GCAACTGTGGTGTTCTCCATTGTGATATAAAACCAGATAATATGTTGGTGAATGAGGCTAAAAACGTGTTAAAGCTTTGTGACTTTGGTAATGCTATGTT TGCTGGTCGGAATGAAGTTACACCATATCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATAATACTCGGGTTGCTGTATGATCATCCATTGGATATTTGG TCTGTGGGCTGTTGTCTATATGAGCTTTATACAGGGAAAGTTCTTTTTCCAGGGCTTACAAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGTC CTTTTCCGAAGAAAATGCTACGCAAGGGAGCGTTTACTGAACAACATTTTGATCAGGACCTGAATTTTCTTGCTACAGAGGAGGACCATGTAACCCAAAA GACCATAAAGCGGATGATTCTCAACATAAAGCCAAAAGATATTGGAACAATCATCACTGGTTCTCCCGGGGAGGATCCAAAAATGTTATCCAACTTCAAG GATCTTCTGGAGAAAACTTTTGTCTTGGATCCAGACAAGAGGCTGACAGTCTCACAAGCTCTGAACCATCCATTCATCACTGGCAAGTGAATAGTGGCCA CTAATTTTATCAAATTCTCTCCATGGCCCAATGAATGCCATCAGTGTAGTTTGCCCGTTGAAGTGAAAGGGGTCAAGTTTGGTCAGGCGGACACCTTACT GGCTGTTCTTTCGTTCAATGTATTGTTTCTATTGAGGCCTATCACTGGTTTGAGGCATCTCTTCCGTGCTTAGATGCTTAAAAGGGATCCCAGGAGAAGG TGTTTGGCTGTGTTCTTGAAGCAAATTCATCTTAGTGAGTAATTCAGTTCAGAAACTTTTATGTTGACCTTGTGGTATGTCAATTCCCTATTCTATTTAT TTTTTAGAAAATAGAGTTCTAAAAAAAGATTTTCGCATTGAGGGAAGTTCATATCTTATAAGTAATGAAATACCCCCTCCCCCAGGTATGTGGTACAAAA TGGAGCAGGAATTGCATGGATCTGTTTTATTTGTTTATTTGTATTGAAAACTTGTTCATGGATTTTTACCACCGTGTTGCAACCGTGCCTAACTAACTCT CACTGAATATATATCTATATAAATGTTTACGGTTTGGAGGTTCTGGGGTGGATATGACCATTTTGGTGAAGATATCACTTTTATTATCTATTTTTATAGT TGTTTTATGGAGGTATATATACAAAAAGAGGGTGCATTGTATCTTCGGAAAATAGCTATAAGCTAATCCCTATTATCAAAGCTATGCTCCATCAGGAAAA AAATATAAACAGTTCCACTCATGCCAACTTAGAAGTTTTAAGGATACTGGTTTGGTCAAAGTATTCTCATATTATTGTCCTCATAATTTTAAAGCTAGTC AGAACGAGGGGGCTGTAGGGATTTATTTTATTGATTGTAATATTCTAAATGACTGGATTTAGATTGATTGCAGTAGCTTGTTTTTAGAATAAATTGTAGA ACTTAGTTTGATTATGAAAATTAGCTTAGTTGTTTTCCAAATATACAATCCTCTCTGCATTGGTATATATATACCTCCTTGTAGTTAACTCTGAAAGCAG ATCTTAGAGAAATATTCTGTCTAAACAATTCAAAGTTAATGATATGTTTTGCTATGACCAAGGCAATTCTGATCACACTTTTTTCTAAAGAAACAATATA GTAGCATCACTACATTTATTGTACAAGTATATTGTCATTAGTCTTTAAGTTTTGAATCTTCCCCTAAGAGCGATTTATAATAACTTGGGCAATCCGCCCC TAAGAGTGAATGATTGTTATTAGTGTTGAACTATTGAAGTCCCTCGTAATAAGTATATTATGTTATTTGGTTCCAAGTATCTAATCTAAGTCTGCTAGTT TGATGTTATTTGACATGGACTTCCACCATTGCTGCTAGAAGTTCTATACTTGGTACCAAAAAAGGTCTTTATAGGGATTGGGCATCCCTCATCCTTTGAG ATAGCTCTTTGGATGAGTTAGGCCGAGTTCATGGTTTGTAAGATGATATCAAAGCTAACCGAATCACAAGAATGGATCGCATGCAGAAAGTCTGTAAACT TCACACTTAGGGTAAAAGAATATGAAACCAAGAGCCATTTATGATAACTTGGGCTTTTGGGGTGGGTTTAGGTAGGCTCAATTATTTTAGTAACAGGAAA CCCTAAGGAAGAAAAGCTCTACAGGACTGTATCTAGAAAGTTTGAAATGAAAAATATAGGTGCTCTAAAATATTTTCTTTGGATAGAAGTATCATATGAT CAAATACTGGAATACTTCTTTCTCAATGGAAAAATACCTTAGATCCATTACGATAAATCAAGATGGAAGGTTTGAAATTATGTGCAGATCCAAATCAGGT GCCCATTGACTAAGGAAGATATGGTAGACTTGTAGGACGGCTGAAACAGCTCTTATACCATCTTGAGAGAAAAAAAAGTATTTTTTTATTCTCTATTTTC ATAGTTTATTACCATCTTGGAAGGTCTATAACCTTCTAAGCTGTAAGATAAGGTTATAAAAGCAACCTGATATAAAAAATCAATCTATATTCTGTAATTT GCAATAGTGCAAATATATTGATGTAACTTCAACACTTCACTACATGGTCCGGCTGTTTTATTCTATTAATACTAGTATATGTATATGTTGTCAGAGCTTT GAATCCTAGCGAGGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80412; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_49835
| Blastp | Serine/threonine-protein kinase PRP4 homolog from Rattus with 54.01% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase PRP4 homolog from Rattus with 54.01% of identity |
| Eggnog | PRP4 pre-mRNA processing factor 4 homolog B (yeast)(ENOG410XPAX) |
| Kegg | Link to kegg annotations (291078) |
| CantataDB | Link to cantataDB annotations (CNT0001118) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427637.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |