Ll_transcript_49975

• Id Trinity: FTRINITY_DN58836_c0_g1_i1
• Name Transcript: Ll_transcript_49975
• Sequence: CATGATCTTCACTCTCATCCAACTACTTAATCCACTATCATGAAATCCAACTCAACCAATCAGAATTCATCAATTTCATCACATAAACCCTCAATCAGAT AGATATAGATTTCACACAACTTCACCATCCAACACATACACACTAACACAACAACCTCAAACTTATTAACTACAGTAACCAAACATTGTCCACTTTGTCA CATTTCTCACCACTAACCATAAAAATCCAATTTTTCTTCATTTCTCATGTCACTTATGTGGTCATTTTCTCTCCACCAACATCAACACAAACCACATAAA ACATCATAAAAGAGAAGCATGATAATAATAAGACTGCAACTTATGTTGTAGTAGCTTAACTTAGGGAAGAAAAATTGTTTCTTTCTCATCTTTCTCTTCT TTTCAATTTGGAAACTGAGAAATTTGTTTTATTTTCTTACTTGGGTTTGTATGCAAAGTTGATTATATCAATGGCTTCTTTAGTTTCTTCACCATTTACT ATACCAAGTTCCAAGGGTGATCAACTTTCTACCCTTGCTAAAAAACATGTTTTTCTTCATTCTTTCCTTCCAAAGAAAGTAAATTACCATGGTAGCTCAA AATCATTACATGGAGTGAAATGTGCTGCAGTTGGCAATGGCCTCTTCACTCAAACCACACAAGAAGTTCGAAGAATTGTTCCAGACAATGACCTAAACTT GCCAAGAGTGAAGATTGTATATGTGGTTCTTGAAGCTCAGTACCAATCATCCCTCACTGCTGCAGTGAGATCACTCAATAGTAATAAGAAAAATGCTTCA TATGAGGTTGTTGGTTACTTGGTAGAGGAGCTTAGAGACAAAGAAAATTATGAGTCCTTCTGCAAGGACTTGGAAGATGCTAATATCTTCATAGGGTCTT TGATTTTTGTGGAGGAGCTTGCCCTTAAGGTGAAGGCAGCAGTGGAGAAAGAAAGGGATAGGCTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAAGT GATGAGGTTGAACAAGTTGGGTTCTTTCAGCATGTCACAGCTTGGACAGTCCAAAAGCCCTTTTTTTCAGCTTTTCAAGAGGAATAAGCAGCAATCTGCA GGGTTTGCTGATAGCATGTTGAAGCTTGTGAGGACATTACCTAAGGTTTTGAAGTATTTGCCAAGTGATAAGGCTCAAGATGCTAGGCTTTATATATTGA GTCTGCAGTTTTGGCTTGGAGGGTCATCTGATAACTTGCAGAATTTTCTGAAAATGATTACTGGGTCTTATGTTCCAGCACTGAAGGGTACAAAGATTGA GTATTCGGAGCCGGTTTTGTACTTGGACAGTGGTATTTGGCACCCTCTTGCTCCTTGTATGTATGAGGATGTGAAGGAGTATTTGAATTGGTATGGAACT AGAAGGGATGCCAATGAGCAGCTAAAGAGTCCGAACGCGCCTGTGATCGGGTTGGTTTTGCAAAGGAGTCATATTGTGACTGGTGATGATGGTCACTATG TGGCTGTGATAATGGAACTTGAGGCTAAAGGTGCTAAGGTTGTTCCAATTTTCGCTGGTGGTCTTGATTTTTCAGGGCCAGTGGAGAGGTACTTGATTGA TCCGGTTACCACGAAACCATTTGTGAATTCTGTAATATCACTTACAGGATTTGCTCTTGTTGGGGGCCCTGCAAGGCAGGACCATCCGAGGGCGATTGAG GCGTTGAGGAAACTTGATGTTCCTTACATTGTTGCTGTGCCACTAGTGTTTCAGACAACAGAAGAGTGGCTGAACAGTACACTTGGTCTGCATCCTGTAC AGGTTGCTCTTCAAGTTGCTCTTCCAGAGCTAGATGGAGGCATGGAGCCGATTGTTTTCGCTGGCCGAGATCCCAGAACCGGAAAATCACATGCTCTTCA TAAGAGAGTGGAACAACTCTGCACTAGGGCAATCAGATGGGCTGAATTGACCAGAAAATCAAAGGCAGAGAAGAAACTAGCAATCACAGTCTTCAGTTTC CCTCCAGACAAAGGAAATGTAGGAACTGCTGCCTACCTTAATGTCTTCTCATCCATATACTCTGTTCTAACAGACCTGAAAAGAGATGGTTACAATGTTG ATGGACTTCCGGAGACCTCAGAAGCTTTGATTGAAGAAGTAATACATGACAAAGAAGCTCAGTTCAGCAGCCCGAATCTGAACATTGCTTACAAAATGAG CGTCCGCGAGTACCAAAAGTTGACTCCTTATGCTGCTGCATTAGAAGAAAACTGGGGAAAACCCCCTGGCAATCTGAATGCAGATGGAGAGAATTTATTG GTATACGGGAAACAGTATGGTAATATCTTCATAGGTGTACAGCCAACATTTGGCTATGAAGGCGACCCTATGAGGCTTCTTTTCTCCAAATCTGCCAGCC CACATCATGGATTCGCAGCATATTACTCGTTTGTTGAGAAAGTTTTCAAAGCCGATGCTGTTCTTCATTTTGGAACGCACGGTTCTCTAGAATTCATGCC TGGAAAGCAGGTCGGGATGAGTGATGTATGCTACCCGGACAGTCTTATTGGAAATATTCCAAATGTATATTACTATGCTGCAAACAACCCTTCAGAGGCT ACCATAGCCAAACGCAGGAGCTATGCAAACACCATTAGCTATCTGACTCCTCCAGCAGAAAATGCTGGTCTATACAAAGGTCTTAAGCAGCTAAGTGAGC TCATCTCCTCATACCAGTCCCTGAAGGACACAGGTCGTGGCCAACAAATTGTGAGTTCGATCATCAGCACAGCTAAACAATGTAATCTCGACAAGGATGT GGACCTTCCAGATGAGGGTGTAGAGCTCCCAGCTACAGAGCGCGACCTTGTAGTTGGAAAGGTCTATTCCAAGATCATGGAGATCGAGTCTCGTCTGTTA CCTTGCGGACTTCATGTCATCGGGGAACCTCCCTCAGCTTTGGAAGCAGTTGCTACGCTGGTGAACATCGCTGCACTTGATCGTCCTGAAGAAGGTATTT CTTCTCTCCCGTCAATACTAGCTGAGACCCAAGGAAGAGGCATAGAGGATCTTTACAGAGGGAATGACAAAGGAATATTGAAGGATGTAGAGCTTCTTCG TCAAATAACTGACACATCACGTGAAGCAGTTACTGCCTTCGTGCAGCGTGCTACTAATGATAAGGGTCAAGTTGTTGATGTAGCTGGTAGACTTAGCAAA ATCCTTGGATTTGGCATCAATGAGCCATGGATTCAGTACTTGTCAGATACCAAGTTTTACCGAGCTGATAGGGAAAAACTAAGAACCTTGTTTGAGTTCT TGGGAGAATGTTTGAAGTTGATTGTGGCTGATAATGAATTGGGAAGTTTAAAACAAGCCTTGGAGGGTAAATATGTTGAGCCTGGCCCTGGTGGGGACCC AATTAGAAATCCTAAAGTTCTGCCAACAGGAAAGAATATTCATGCCCTCGACCCACAATCTATTCCTACGACCGCAGCAATGCAGAGTGCCATTGTAGTG GTAGATAGGTTGATTGAGAGGCAGAAAGCCGATAACGGGGGAAAATATCCTGAGACGGTTGCACTTGTATTGTGGGGAACAGATAATATTAAAACATATG GTGAATCCTTGGGTCAGGTCTTGTGGATGATCGGTGTGAGGCCAGTAGCTGATACCTTTGGTAGGGTTAACCGGGTGGAACCTGTAAGTATCGAAGAGCT TGGAAGGCCTAGGATTGATGTTGTTGTTAATTGCTCAGGAGTGTTCAGAGACCTTTTCATCAACCAGATGAATCTTCTGGATAGAGCAGTGAAGATGGTA GCTGAATTAGATGAACCACCAGAGCAAAACTATGTGAGGAAGCATGCATTAGAGCAAGCTCAAGCACTTGGAATTGATGTTCGCGAGGCAGCAACAAGGG TCTTCTCCAATGCCTCAGGATCCTACTCCTCAAACATAAACCTGGCCGTGGAGAATTCTTCATGGAATGATGAGAAGCAACTCCAGGACATGTACCTTAG CCGAAAGTCCTTTGCTTTTGATAGCGATGCTCCTGGCGTGGGTATGACTGAAAAAAGAAAAGTCTTCGAGATGGCTCTGAGCACTGCAGATGCCACTTTC CAAAATCTCGACTCATCAGAAATTTCACTCACTGATGTCAGTCATTACTTTGACTCGGACCCAACTAATCTGGTTCAAAATCTAAGGAAAGATGGGAAGA AGCCTAGTGCATACGTCGCTGACACTACCACAGCTAATGCTCAGGTACGTACCCTTTCTGAGA
• Tissue: flowers
• Gene name: LI_gene_80508;
• Additional information: details;

Expression of Ll_transcript_49975

FPKM

• FPAB: 27.7
• FPNAB: 32.6
• LF1: 39.9
• LF2: 42.6
• LF3: 40.3
• LF4: 35.1
• UF1: 32.6
• UF2: 39
• UF3: 38.9
• UF4: 34.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_49975

• Blastp: Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 85.44% of identity
• Blastx: Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 85.44% of identity
• Eggnog: cobaltochelatase, cobn subunit(COG1429)
• Kegg: Link to kegg annotations (AT5G13630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444038.1)
• Pfam: Domain of unknown function (DUF3479) (PF11965.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;