Ll_transcript_49978

• Id Trinity: FTRINITY_DN58836_c0_g1_i2
• Name Transcript: Ll_transcript_49978
• Sequence: CATGATCTTCACTCTCATCCAACTACTTAATCCACTATCATGAAATCCAACTCAACCAATCAGAATTCATCAATTTCATCACATAAACCCTCAATCAGAT AGATATAGATTTCACACAACTTCACCATCCAACACATACACACTAACACAACAACCTCAAACTTATTAACTACAGTAACCAAACATTGTCCACTTTGTCA CATTTCTCACCACTAACCATAAAAATCCAATTTTTCTTCATTTCTCATGTCACTTATGTGGTCATTTTCTCTCCACCAACATCAACACAAACCACATAAA ACATCATAAAAGAGAAGCATGATAATAATAAGACTGCAACTTATGTTGTAGTAGCTTAACTTAGGGAAGAAAAATTGTTTCTTTCTCATCTTTCTCTTCT TTTCAATTTGGAAACTGAGAAATTTGTTTTATTTTCTTACTTGGGTTTGTATGCAAAGTTGATTATATCAATGGCTTCTTTAGTTTCTTCACCATTTACT ATACCAAGTTCCAAGGGTGATCAACTTTCTACCCTTGCTAAAAAACATGTTTTTCTTCATTCTTTCCTTCCAAAGAAAGTAAATTACCATGGTAGCTCAA AATCATTACATGGAGTGAAATGTGCTGCAGTTGGCAATGGCCTCTTCACTCAAACCACACAAGAAGTTCGAAGAATTGTTCCAGACAATGACCTAAACTT GCCAAGAGTGAAGATTGTATATGTGGTTCTTGAAGCTCAGTACCAATCATCCCTCACTGCTGCAGTGAGATCACTCAATAGTAATAAGAAAAATGCTTCA TATGAGGTTGTTGGTTACTTGGTAGAGGAGCTTAGAGACAAAGAAAATTATGAGTCCTTCTGCAAGGACTTGGAAGATGCTAATATCTTCATAGGGTCTT TGATTTTTGTGGAGGAGCTTGCCCTTAAGGTGAAGGCAGCAGTGGAGAAAGAAAGGGATAGGCTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAAGT GATGAGGTTGAACAAGTTGGGTTCTTTCAGCATGTCACAGCTTGGACAGTCCAAAAGCCCTTTTTTTCAGCTTTTCAAGAGGAATAAGCAGCAATCTGCA GGGTTTGCTGATAGCATGTTGAAGCTTGTGAGGACATTACCTAAGGTTTTGAAGTATTTGCCAAGTGATAAGGCTCAAGATGCTAGGCTTTATATATTGA GTCTGCAGTTTTGGCTTGGAGGGTCATCTGATAACTTGCAGAATTTTCTGAAAATGATTACTGGGTCTTATGTTCCAGCACTGAAGGGTACAAAGATTGA GTATTCGGAGCCGGTTTTGTACTTGGACAGTGGTATTTGGCACCCTCTTGCTCCTTGTATGTATGAGGATGTGAAGGAGTATTTGAATTGGTATGGAACT AGAAGGGATGCCAATGAGCAGCTAAAGAGTCCGAACGCGCCTGTGATCGGGTTGGTTTTGCAAAGGAGTCATATTGTGACTGGTGATGATGGTCACTATG TGGCTGTGATAATGGAACTTGAGGCTAAAGGTGCTAAGGTTGTTCCAATTTTCGCTGGTGGTCTTGATTTTTCAGGGCCAGTGGAGAGGTACTTGATTGA TCCGGTGACGAAGAAATCATTTGTGAATTCTGTAATATCGCTTACAGGGTTTGCTCTTGTTGGAGGCCCTGCTAGGCAGGATCATCCGAGGGCGATTGAG GCTTTGAGGAAGCTTGATGTTCCTTACATTGTTGCTGTGCCTCTAGTGTTTCAGACAACGGAAGAGTGGCTGAATAGTACACTTGGTCTGCATCCAGTAC AGGTTGCTCTTCAAGTTGCTCTTCCAGAGCTAGATGGAGGCATGGAGCCGATTGTTTTTGCTGGTCGAGATCCCAGAACAGGAAAATCTCATGCTCTTCA TAAGAGAGTGGAACAACTCTGCACTAGGGCAATCAGATGGGCCGAATTGACAAGAAAATCAAAGGCAGAGAAGAAACTAGCAATTACGGTCTTCAGTTTC CCTCCAGACAAAGGAAACGTGGGAACCGCGGCTTACCTGAATGTCTTTTCCTCTATTTACTCTGTTCTGAAGGACCTCAAGAGGGATGGTTACAATGTTG ATGGTCTTCCAGAGACTTCAGAAGCTTTGATCGAAGAAGTTATACATGACAAAGAAGCTCAATTCAGCAGCCCAAATCTGAATGTTGCTTACAAAATGAA CGTTCGCGAGTACCAAAAGCTGACTCCCTATTCCACTGCATTAGAAGAAAATTGGGGAAAACCCCCCGGCAATCTGAATGCAGATGGAGAGAATCTATTG GTATATGGGAAACAGTATGGTAATATCTTCATAGGTGTTCAGCCGACATTTGGTTACGAAGGGGATCCTATGAGGCTTCTTTTCTCCAAATCTGCCAGCC CACATCATGGGTTTGCAGCATATTACTCATTTGTTGAGAAAATTTTCAAAGCCGATGCTGTCCTTCATTTTGGAACACATGGTTCTCTTGAATTCATGCC TGGAAAGCAGGTTGGAATGAGTGATGTATGTTACCCGGACAGTCTGATCGGGAATATTCCAAATGTATATTACTATGCTGCAAACAACCCTTCTGAGGCC ACCATAGCTAAGCGTAGGAGCTACGCTAACACAATTAGCTATCTGACTCCTCCAGCAGAAAATGCCGGACTATACAAAGGTCTTAAGCAGTTAAGTGAGC TCATCTCCTCATATCAGTCCCTCAAGGACACAGGCCGTGGTCAACAAATTGTGAGTTCGATTATCAGCACAGCCAGACAATGTAATCTTGACAAGGACGT GGAACTACCAGATGAGGGTGTGGAGCTCCCAGCCAAAGAGCGCGACCTTGTAGTTGGAAAGGTGTATTCCAAGATCATGGAGATTGAGTCTCGTCTGTTA CCTTGCGGACTTCATGTCATCGGGGAACCTCCCTCAGCTTTGGAAGCGGTTGCTACACTGGTGAATATTGCTGCACTTGATCGTCCTGAAGAGGGTATTT CTTGTCTCCCGGCAATACTAGCTGCAACTCAAGGAAGAGATATAGAGGATCTTTACAGAGGGAGTGACAAAGGAACATTGAAGGATGTAGAGCTTCTTCG TCAAATAACTGATGCATCACGTGGAGCAATTACTGCCTTCGTGCAGCGCGCTACTAATGATAAGGGTCAAGTTGTTGATGTAGCTGATAGACTTAGCTCA ATCCTTGGATTTGGCATAAATGAGCCATGGATTCAGTACTTGTCAGATACCAAGTTTTACCGAGCTGATAG
• Tissue: flowers
• Gene name: LI_gene_80508;
• Additional information: details;

Expression of Ll_transcript_49978

FPKM

• FPAB: 27
• FPNAB: 32.5
• LF1: 44.4
• LF2: 45.1
• LF3: 42.4
• LF4: 30.3
• UF1: 31.4
• UF2: 41.7
• UF3: 44.8
• UF4: 28

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_49978

• Blastp: Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 84.14% of identity
• Blastx: Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 84.14% of identity
• Eggnog: cobaltochelatase, cobn subunit(COG1429)
• Kegg: Link to kegg annotations (AT5G13630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444038.1)
• Pfam: Domain of unknown function (DUF3479) (PF11965.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;