| Id Trinity | FTRINITY_DN58836_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_49979 |
| Sequence | CATGATCTTCACTCTCATCCAACTACTTAATCCACTATCATGAAATCCAACTCAACCAATCAGAATTCATCAATTTCATCACATAAACCCTCAATCAGAT AGATATAGATTTCACACAACTTCACCATCCAACACATACACACTAACACAACAACCTCAAACTTATTAACTACAGTAACCAAACATTGTCCACTTTGTCA CATTTCTCACCACTAACCATAAAAATCCAATTTTTCTTCATTTCTCATGTCACTTATGTGGTCATTTTCTCTCCACCAACATCAACACAAACCACATAAA ACATCATAAAAGAGAAGCATGATAATAATAAGACTGCAACTTATGTTGTAGTAGCTTAACTTAGGGAAGAAAAATTGTTTCTTTCTCATCTTTCTCTTCT TTTCAATTTGGAAACTGAGAAATTTGTTTTATTTTCTTACTTGGGTTTGTATGCAAAGTTGATTATATCAATGGCTTCTTTAGTTTCTTCACCATTTACT ATACCAAGTTCCAAGGGTGATCAACTTTCTACCCTTGCTAAAAAACATGTTTTTCTTCATTCTTTCCTTCCAAAGAAAGTAAATTACCATGGTAGCTCAA AATCATTACATGGAGTGAAATGTGCTGCAGTTGGCAATGGCCTCTTCACTCAAACCACACAAGAAGTTCGAAGAATTGTTCCAGACAATGACCTAAACTT GCCAAGAGTGAAGATTGTATATGTGGTTCTTGAAGCTCAGTACCAATCATCCCTCACTGCTGCAGTGAGATCACTCAATAGTAATAAGAAAAATGCTTCA TATGAGGTTGTTGGTTACTTGGTAGAGGAGCTTAGAGACAAAGAAAATTATGAGTCCTTCTGCAAGGACTTGGAAGATGCTAATATCTTCATAGGGTCTT TGATTTTTGTGGAGGAGCTTGCCCTCAAGGTAAAGGATGCAGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAAGT AATGAGGCTGAACAAGTTGGGTTCTTTCAGCATGTCACAGCTTGGACAATCAAAAAGTCCTTTTTTTCAGCTTTTCAAGAGGAATAAGCAGCAATCTGCA GGGTTTGCTGACAGCATGTTGAAGCTTGTGAGGACATTGCCAAAGGTGTTGAAGTATTTGCCTAGTGATAAGGCTCAAGATGCTAGGCTTTATATATTGA GTCTGCAGTTTTGGCTTGGAGGGTCACCTGATAACTTGGAGAATTTCCTGAAAATGATTACTGGATCTTATGTTCCTGCTCTGAAGGGGACAAAGATCGA GTATTCGGAGCCGGTTTTGTACTTGGACACTGGGATTTGGCATCCTCTTGCTCCTTGTATGTATGATGATGTGAAAGAGTATTTGAATTGGTATGGAACT AGAAGGGACGCGAACGAGAAGCTTAAGAGTCCGAACGCGCCTGTAATTGGTTTGGTTTTGCAAAGGAGTCATATTGTGACTGGTGATGATGGTCACTATG TGGCTGTGATCATGGAACTTGAGGCTAAGGGAGCTAAGGTTATTCCAATTTTCGCCGGTGGTCTTGATTTTTCAGGACCAGTGGAGAGGTACTTGATTGA TCCGGTTACCACGAAACCATTTGTGAATTCTGTAATATCACTTACAGGATTTGCTCTTGTTGGGGGCCCTGCAAGGCAGGACCATCCGAGGGCGATTGAG GCGTTGAGGAAACTTGATGTTCCTTACATTGTTGCTGTGCCACTAGTGTTTCAGACAACAGAAGAGTGGCTGAACAGTACACTTGGTCTGCATCCTGTAC AGGTTGCTCTTCAAGTTGCTCTTCCAGAGCTAGATGGAGGCATGGAGCCGATTGTTTTCGCTGGCCGAGATCCCAGAACCGGAAAATCACATGCTCTTCA TAAGAGAGTGGAACAACTCTGCACTAGGGCAATCAGATGGGCTGAATTGACCAGAAAATCAAAGGCAGAGAAGAAACTAGCAATCACAGTCTTCAGTTTC CCTCCAGACAAAGGAAATGTAGGAACTGCTGCCTACCTTAATGTCTTCTCATCCATATACTCTGTTCTAACAGACCTGAAAAGAGATGGTTACAATGTTG ATGGACTTCCGGAGACCTCAGAAGCTTTGATTGAAGAAGTAATACATGACAAAGAAGCTCAGTTCAGCAGCCCGAATCTGAACATTGCTTACAAAATGAG CGTCCGCGAGTACCAAAAGTTGACTCCTTATGCTGCTGCATTAGAAGAAAACTGGGGAAAACCCCCTGGCAATCTGAATGCAGATGGAGAGAATTTATTG GTATACGGGAAACAGTATGGTAATATCTTCATAGGTGTACAGCCAACATTTGGCTATGAAGGCGACCCTATGAGGCTTCTTTTCTCCAAATCTGCCAGCC CACATCATGGATTCGCAGCATATTACTCGTTTGTTGAGAAAGTTTTCAAAGCCGATGCTGTTCTTCATTTTGGAACGCACGGTTCTCTAGAATTCATGCC TGGAAAGCAGGTCGGGATGAGTGATGTATGCTACCCGGACAGTCTTATTGGAAATATTCCAAATGTATATTACTATGCTGCAAACAACCCTTCAGAGGCT ACCATAGCCAAACGCAGGAGCTATGCAAACACCATTAGCTATCTGACTCCTCCAGCAGAAAATGCTGGTCTATACAAAGGTCTTAAGCAGCTAAGTGAGC TCATCTCCTCATACCAGTCCCTGAAGGACACAGGTCGTGGCCAACAAATTGTGAGTTCGATCATCAGCACAGCTAAACAATGTAATCTCGACAAGGATGT GGACCTTCCAGATGAGGGTGTAGAGCTCCCAGCTACAGAGCGCGACCTTGTAGTTGGAAAGGTCTATTCCAAGATCATGGAGATCGAGTCTCGTCTGTTA CCTTGCGGACTTCATGTCATCGGGGAACCTCCCTCAGCTTTGGAAGCAGTTGCTACGCTGGTGAACATCGCTGCACTTGATCGTCCTGAAGAAGGTATTT CTTCTCTCCCGTCAATACTAGCTGAGACCCAAGGAAGAGGCATAGAGGATCTTTACAGAGGGAATGACAAAGGAATATTGAAGGATGTAGAGCTTCTTCG TCAAATAACTGACACATCACGTGAAGCAGTTACTGCCTTCGTGCAGCGTGCTACTAATGATAAGGGTCAAGTTGTTGATGTAGCTGGTAGACTTAGCAAA ATCCTTGGATTTGGCATCAATGAGCCATGGATTCAGTACTTGTCAGATACCAAGTTTTACCGAGCTGATAGGGAAAAACTAAGAACCTTGTTTGAGTTCT TGGGAGAATGTTTGAAGTTGATTGTGGCTGATAATGAATTGGGAAGTTTAAAACAAGCCTTGGAGGGTAAATATGTGACTCCTGGCCCTGGTGGTGACCC AATTAGAAATCCTAAAGTTCTGCCAACTGGAAAAAATATTCATGCCCTTGACCCACAATCTATTCCTACAACCGCAGCAATGCAGAGTGCCATGATAGTG GTGGATAGGTTGATTGAGAGGCAGAAAGCTGATAATGGCGGAAAGTATCCTGAGACGATTGCACTAGTATTGTGGGGAACAGATAATATTAAAACATATG GTGAATCCTTGGGCCAGGTCTTGTGGATGATTGGTGTGAGACCAGTGGCTGATACCTTTGGTAGGGTAAACCGGGTGGAACCTGTAAGTATTGAAGAGCT TGGAAGGCCTAGGATTGATGTTGTTGTTAATTGCTCGGGAGTTTTCAGAGACCTTTTCATCAATCAGATGAATCTTCTGGATAGAGCAGTGAAGATGGTA GCTGAATTAGACGAACCAGCAGAGCAAAACTATGTAAGGAAGCATGCATTAGAACAAGCTCAAACCCTCGGAATTGATGTTCGAGAAGCAGCAACTAGGG TCTTCTCCAATGCCTCAGGATCCTACTCCTCAAATATAAACCTGGCTGTGGAGAATTCTTCATGGAATGATGAGAAGCAACTCCAGGACATGTACCTTAG CCGAAAGTCCTTTGCTTTTGATAGTGATGCTCCTGGTGTGGGCATGGCTGAAAAAAGAAAAGTGTTCGAGATGGCTCTGAGCACTGCGGATGCCACATTC CAAAACCTTGACTCATCAGAAATTTCACTGACTGATGTCAGTCATTACTTTGACTCGGACCCGACTAACCTAGTTCAAAATCTAAGGAAAGATGGAAAGA AGCCTAGTTCATACGTCGCTGACACTACCACAGCTAATGCTCAGGTACGTACCCTTTCTGAGACAGTTAGGCTTGATGCGCGAACCAAACTGTTGAACCC CAAGTGGTATGAAGGCATGTTGTCTAGTGGTTACGAGGGAGTTCGCGAGATTGAGAAGAGGCTTACTAATACTGTAGGGTGGAGTGCAACTTCAGGACAA GTTGACAACTGGGTTTATGAAGAAGCCAACACAACTTTCATTCAAGATGAGCAAATGCTGAACAAACTCATGAGCACAAATCCAAACTCCTTCAGGAAGC TGGTGCAGACATTCTTGGAAGCCAATGGGCGCGGTTATTGGGAGACATCAGAACAAAATATTGAGAAGCTCAAGGAGTTGTACTCAGAAGTGGAAGACAA AATCGAAGGCATCGATCGTTAAAGTTGATTCACATATGTTGAGAAGTATATACAACACTTAAGAGACTCCAACTTGGGATTGATACATGATGTCAAAAAC ATCCTTTTAATGTTATTTTGTTTTCCTTTTCTCATTTTTTGATACAATTCTCCTTTGTGCAGTTGCAAACTATATAACCCATGTGAACAAATAAAGCTCC TTGTTCAAAATTAATGACTGGCCTATATCATTGATTTATCATTATGTTATTGCATGAAAAATAGAACTTGATAATGAATATTAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80508; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_49979
| Blastp | Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 86.12% of identity |
|---|---|
| Blastx | Magnesium-chelatase subunit ChlH, chloroplastic from Arabidopsis with 86.12% of identity |
| Eggnog | cobaltochelatase, cobn subunit(COG1429) |
| Kegg | Link to kegg annotations (AT5G13630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425159.1) |
| Pfam | Domain of unknown function (DUF3479) (PF11965.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |