Ll_transcript_50473

Id TrinityFTRINITY_DN58840_c0_g1_i2
Name TranscriptLl_transcript_50473
SequenceATTTCCATCACCATAATCATCGCCTTTAATCACATTTATCTAAAACAAAAAGGCCTAAACTTTTCATTTTTATACACATATTATTATCAATTTATCATTA TTTCGTTGTTGCTAATGCCAAAAATCAGATGAATCTTAAAGCATTATTACATGATGATGAAATCTTGGTAAAATATTAAAGACATGTGTTTGTGATTTTG AAGGTTAAAAAGTAAAAGAGAGAATGTATGAATCAGTGGTTTATCAAGGGGATGTGGTATTGGGTAGTGTAGTGATACACCCAGAAGAGAAGATAATTCA TTTGAAGGAAATCAGAATAAGTCATTTCTCACAATCTAGTGAGAGGTGTCCACCACTTGCAGTGCTTCACACAGTGACATCAACAAGTGTTTGCTTCAAA ATGGAGTCAAAGACTACACAACAACAAGATGGGCTTTTTCATTTGCACTCCTTGTGTATCAGAGAGAATAAGACTGCTATAATGCCATTTGGTTCAGAAG AAATACATCTGGTTGCAATGTATTCGCGTAATAATGATAGACCATGTTTTTGGGGATTTGTCGTTGCCTCAGGACTTTACGATTCATGCCTTGTGATGTT AAACCTTAGATGTTTGGCTATAGTGTTCGATCTGGATGAAACACTTATAGTAGCAAATACAATGCGTTCGTTTGAGGATAGGATTGAGGCACTCCAGAGA AAAATAAACTCTGAGGTAGATCCACAAAGAATTACTGGTATGCAGGCAGAGGTCAAGCGTTACCTAGATGACAAGAATATATTGAAGCAATATGCTGAAA ATGACCAGGTTGTTGATAATGGGAGAATTATGAAAGTTCAATCTGAGATTGTTCCAGCATTATCTGAGAGCCATCAGTCTATAGTTCGACCACTGATACG GTTACAGGAAAAGAACATTATTCTGACACGCATCAATCCACAGATTCGTGATACAAGTGTTCTTGTGAGGTTAAGACCTGCATGGGAAGATCTTCGCGGT TACCTGACTGCAAGAGGACGCAAGCGTTTTGAGGTTTATGTTTGCACAATGGCTGAAAGGGACTATGCACTAGAAATGTGGAGACTTCTTGATCCAGATT CAAATCTGATAAACACTAAAGAACTTTTAGATCGCATTGTCTGTGTTAAATCTGGTTTGAAGAAGTCATTGTTCAATGTCTTCCAAAATGGCTTTTGCCA TCCAAAGATGGCATTGGTAATCGACGACCGCTTGAAAGTGTGGGATGAGAAAGATCAACCTCGGGTGCATGTTGTCCCTGCATTTGCTCCATACTATGCT CCACAAGCTGAAGCAAGCAATGCTATCCCTGTCTTGTGTGTTGCAAGAAATGTTGCTTGCAATGTTCGGGGTGGTTTCTTTAAGGACTTTGATGACGGAC TTCTACAGAAGATTCCTCAAATTGCTTATGAAGATGATATCAAAGCTGTACCTTCTCCTGATGTGAGCAATTATCTAGTTTCAGAGGATGATACATCTGC TTCCAATGGAAATAGAGATCCAACTTTATTTGATGGCATGACAGATGCTGATGTAGAAAGAAGACTAAAGGAGGCAATTATAGCAGCTGCTTCAAGTATC CCTGTGGCAACTGCTAATCTAGATCCCAGGCTTACTACCCTTCTTCAATACACAGTGATGCCTTCTGATTCAGTTTCTCCCCCAAAAGCACAATCATCTA TGATGCAATTTTCCAGTGTACCATTCCTTCAACCTGCTACACTAGTTAAGCCAATGGGTCAAGTTGCCCCTCCAGAACCTAGCTTGCATAGTTCTCCTGG TAGAGAAGAGGGTGAAGTACCTGAATCAGAATTGGATCCAGATACAAGGCGTAGGCTTCTCATATTGCAGCATGGGCAAGACATAAGGGACCACACATCT ACTGAGCCTCCATTTCCTACTAGTCAGCCCATGCAAGTTTCCGCTTCTCATATGCCATCACGTGGGGCATGGTTCCCTGTTGAAGTAGAGACTGGTTCTC AGCAACTTAATCGGGTAGTACCTAAAGAATTCCCTGTAGATTCTGAACCATTGCATATTGAGAAGCATGGTCGTCATCGTCCATCCTTTTTCTCCAAAGC TGACAATGCTATTTCATCTGATAAAATTCTCAATGAGAGCCACCAGAGATTGCCGAAGGAGATGTATCATAGAGACAATCGCTCAAGATTAAGCCATAAA CTCTCTAGTTATCATTCATTCTCTGGTGATGACATCCGCTTGAGTAGATCATTTTCCAGCCACAGAGATCCCAACTCAGAATCTGGCCATTCTCTATTGC ATGCAGATACTCCAGCTGTAGTGCTACAGGAAATTGCACTGAAGTGTGGAACTAAGGTGGAGTTTACGTCTTCTTTGGTTGCTAGCACAGAATTGCAGTT CTCCGTTGAGGCATGGTTTTCGGGACGAAGAATTGGTCAAGGATTGGGAAGAACTAGAAAGGAAGCCCAACATAAGGCTTCTGAGGAATCTTTAAAACAC TTGGCTGATATATATTTGTCTCGAGCTGAGGCTGATTCTGGTTCTACATATGGCAATGCAAAGGGGTTTCCTAAAGCAAATGACAATGGTCATGTGGGCA ATGTTAATTCTCCTGGTAACTCGTCATGGCCTAAAGAAGATTCATTCTCATTTTCAACTTCATTGGATTCATCAAGGGTTTTAGATCATAGGTTTGAAGT CTCTAACGGGCCAATGGGCCCAGTCTCCGCCCTCAAAGAATTGTGCATGATGGAGGGTTTCGGTGTCAGGTTTCAGTCTCTAGATGCCCCAGCTTCACCG AATTCATCTCAGAAAGATGCAGTATATGCACAGGTCGAGATAGATGGCCAGGTATTTGGCAAAGGGACTGGATTAACATGGGATGAGGCTAAGATGCAGG CTGCCGAGAAGGCCCTTGGAAGTCTAAGGAGTCAAAACCTTCAGAAACAGCAGGGTTCTCCCAGTTTATATGGTGCACTACGAGATATCCTGCCTTCAGA CAAAATTATGGATACAATTGATTAGACAAATTGAAATACAGATAGAATTGGCTTCTAATTTCTAACAATGAATTGGTCATCACCTGGATTGCCAACTAAA CGTCCAAAGCATGAACATCCCCGGAATCATCAGCGGTTTCCTTCTTCTGGTAGATATCTCAGGAATGCTTCTCCTTATCATTGAAAAGAGTCACAAGATT TTCGTCTAACTTATTGGTATAGTTGTTGGGGCCATTATATATGTTACTAATGCAACAATAGATAGAATGGTTGTTGAGCTGGACTATTGCAACATAGAGT GATCGCTTGGTCCCTGTCTTTTTATTAGAGACAAAAGCCATGTTGCACACCAACTTGTTGCAACAATCATCATTGAAGTGGGGTGAGATACTGGTCAAAG TTTTTGTGAGATACTCACATCTTGGTTCTCCAGTGGTATCCCATCGTTCAATTCATATAGCCGACCTCACCTGGCGGAAATACCAAGGCCGCTTCACTTG AGATGATGATGAGGCACGTCCAATTCCTACTTGCATTTATTTGGCTAGTTGTATACTTGGTGCGGCATACTCAAAGAGTAGGCTATTGGAACTGAGCATT GATTCAACATTTTTCCTAACTGAAATATTGGCGCAACCATTTTAGTACAGACCTTCTTCATGCATGGAGAGTTGGTTTTCAC BLAST
Tissueflowers
Gene nameLI_gene_80538; 
Additional informationdetails; 

Expression of Ll_transcript_50473

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_50473
BlastpRNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 57.96% of identity
BlastxRNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 55.71% of identity
EggnogCTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
KeggLink to kegg annotations (AT4G21670)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445654.1)
PfamNLI interacting factor-like phosphatase (PF03031.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;