Ll_transcript_50497

• Id Trinity: FTRINITY_DN58840_c0_g1_i26
• Name Transcript: Ll_transcript_50497
• Sequence: CAGAAAGCTGATCCATGTTGTTCCCTTTAGAGGGGTGTTACTTAATGAAATATGTTTGCTATTTTATTTATTAGGATTAGGAATTTATTGATATGGGTGA GTACTCTCATAATTGACATTTTTATTTCCAGGCATGGTTTTCGGGACGAAGAATTGGTCAAGGATTGGGAAGAACTAGAAAGGAAGCCCAACATAAGGCT TCTGAGGAATCTTTAAAACACTTGGCTGATATATATTTGTCTCGAGCTGAGGCTGATTCTGGTTCTACATATGGCAATGCAAAGGGGTTTCCTAAAGCAA ATGACAATGGTCATGTGGGCAATGTTAATTCTCCTGGTAACTCGTCATGGCCTAAAGAAGATTCATTCTCATTTTCAACTTCATTGGATTCATCAAGGGT TTTAGATCATAGGTTTGAAGTCTCTAACGGGCCAATGGGCCCAGTCTCCGCCCTCAAAGAATTGTGCATGATGGAGGGTTTCGGTGTCAGGTTTCAGTCT CTAGATGCCCCAGCTTCACCGAATTCATCTCAGAAAGATGCAGTATATGCACAGGTCGAGATAGATGGCCAGGTATTTGGCAAAGGGACTGGATTAACAT GGGATGAGGCTAAGATGCAGGCTGCCGAGAAGGCCCTTGGAAGTCTAAGGAGTCAAAACCTTCAGAAACAGCAGGGTTCTCCCAGGTTTTTTAGTGGCCA GCATTATATCATGTACAACAGTGTCATCACCTGGATTGCCAACTAAACGTCCAAAGCATGAACATCCCCGGAATCATCAGCGGTTTCCTTCTTCTGGTAG ATATCTCAGGAATGCTTCTCCTTATCATTGAAAAGAGTCACAAGATTTTCGTCTAACTTATTGGTATAGTTGTTGGGGCCATTATATATGTTACTAATGC AACAATAGATAGAATGGTTGTTGAGCTGGACTATTGCAACATAGAGTGATCGCTTGGTCCCTGTCTTTTTATTAGAGACAAAAGCCATGTTGCACACCAA CTTGTTGCAACAATCATCATTGAAGTGGGGTGAGATACTGGTCAAAGTTTTTGTGAGATACTCACATCTTGGTTCTCCAGTGGTATCCCATCGTTCAATT CATATAGCCGACCTCACCTGGCGGAAATACCAAGGCCGCTTCACTTGAGATGATGATGAGGCACGTCCAATTCCTACTTGCATTTATTTGGCTAGTTGTA TACTTGGTGCGGCATACTCAAAGAGTAGGCTATTGGAACTGAGCATTGATTCAACATTTTTCCTAACTGAAATATTGGCGCAACCATTTTAGTACAGACC TTCTTCATGCATGGAGAGTTGGTTTTCAC
• Tissue: flowers
• Gene name: LI_gene_80538;
• Additional information: details;

Expression of Ll_transcript_50497

FPKM

• FPAB: 0.5
• FPNAB: 0.1
• LF1: 0
• LF2: 0.3
• LF3: 0.4
• LF4: 0.7
• UF1: 0
• UF2: 0.1
• UF3: 1.3
• UF4: 1.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_50497

• Blastp: RNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 54.44% of identity
• Blastx: RNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 44.39% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (AT4G21670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445655.1)
• Pfam: Double-stranded RNA binding motif (PF00035.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;