Ll_transcript_50474

Id TrinityFTRINITY_DN58840_c0_g1_i3
Name TranscriptLl_transcript_50474
SequenceCCTTAAATTAAGCATCAAAGACCCTTTTCCAAATTATATTTAATTTTTCTATTGAAGCCGTTACAGAGGAAAAATATATATTTAATAATCATTTTGATCT AGGGTTAAATATTTCATCACAATCAAACTTTTCTACTACTTGTATTATTTATTTATTAACATAAGCTAGGTTATGCATTTTGGAAGTACTTTTTTGTGAG CCATCGTTTTTAGGATCTAGGGTTTCTCTCTCTTACGTCTTGTTCTTCAATTTGAAAATTCATCTTCAACAATCTTCGCAGCTATCAACAAAAACCCTAA CTTTTCGCCACCCAAAGATAAAAGGAACCATTCACCGAATACCCCAATCAAAGAGAGATTCAAAATCACGCGTTCCTGCATTAGTTTGTTGTTACTGTTC TTGGAAATTTTTTATTCCCAATTTCCATCGCCATCACCACATTTCAATCACATGTATATCTAAAACGAAAAAAAGGGAAAAGTTAAAGAGAGAATGTATG AGTCAGTGGTGTATGAAGGGGATGTGGTTTTGGGTGGTGTAGTGATACACCCATCAGAGAAGATAATTCATTTGAAGGAAATCAGAATAAGCCATTTTTC ACAACCTAGTGAGAGGTGTTCACCACTTGCAGTGCTTCACACCTTGGCCTCAACCAATGTTTGCTTCAAAGTGGAGTCAAAGACACCACAACAACAAGAT GGGCTTTTTCATTTGCACTCCTTGTGTATCAGAGAGAATAAGACTGCTGTAGTGCCACTTGGTTTGGAAGAAATACATCTAGTTGCAATGCATCCACGGA ATAATGATAGACCATGTTTCTGGGGAGTTGTCGTTGCCTCAGAACTTTACAATTCATGCCTTGTGATGTTAAACCTTAGATGTTTGGCTATAGTGTTTGA TCTAGATGAAACACTTATAGTAGCAAACACAATGCGCTCGTTTGAGGATAAAATTGAGGCACTCCAGAGAAAAATAAACTCCGAGGTGGATCCACAGAGA ATTGCTGGTATGCAGGCAGAGGTCAAACGCTACCTAGATGACAAGATTATATTGAAGCAATATGCTGAAAATGATCAGGTTGTTGATAATGGGAAAGTAA TAAAAGTTCAACCTGAGATTGTTCCAGCATTATCTGATAGCCATCAGCCTATAGTTCGACCACTGATACGGTTACAGGAAAATAACATTATTCTGACACG CATCAATCCACAGATTCGTGATACAAGTGTTCTTGTGAGGTTGAGACCTGCATGGGAAGATCTTCGGGGTTACCTGACCGCAAGAGGGCGCAAGCGTTTT GAGGTTTATGTTTGCACAATGGCTGAAAGGGACTATGCACTAGAAATGTGGAGACTTCTTGATCCGGATTCAAATTTGATAAACTCTAAAGAACTATTAG ACCGCGTTGTGTGTGTTAAGTCTGGTTTGAAGAAATCATTGTTCAATGTCTTCCAAAATGCTTTATGCCATCCGAAGATGGCATTGGTAATTGATGATCG CTTGAAAGTGTGGGATGAGAAAGATCAACCTCGGGTGCATGTTGTCCCTGCATTTGCTCCATACTATGCTCCCCAAGCTGAAGCAAGCAATGCTGTCCCT GTCTTGTGTGTTGCAAGAAATGTTGCTTGCAATGTTAGAGGCAGCTTCTTTAAGGAATTTGACGATGGTCTTTTACTAAAGATTCCTCAAATCGCCTATG AAGATGATATCAAAGATGTACTTTCTCCTCCTGATGTGAGCAATTATCTAGTTTCAGAGGATGATGCATCTGCTTCCAATGGAAATAGAGATCCAACTTT ATTTGATGGCATGACAGATGCTGAGGTAGAAAGAAGATTAAAGGAGGCGAATATATCAGCTGCTTCAAGTATCCCTGTGGCAACTGCTAACCTAGATCCC AGCCTTACTACCTCTTTTCAATACACAGCAGTGCCTTCTGTTTCTGGTTCAGTTCCACCCCCACCAGCACCATCATCTGTGTTGCAATTTCCCAGTGTAC CATTCCTTCAACCTGCTAAGCCAATGGGTCAAGTTGCCCCTTCAGGACCAACCTTGCATAGTTCTCCTGCTAGAGAAGAGGGTGAAGTACCGGAATCAGA ATTAGACCCAGATACAAGGCGTAGGCTTCTCATATTGCAGCATGGGCAAGACATAAGGGATAACAAATCTAGTGAGCCTCCATTTCCCATTAGACAGCCT TTGCAAGCTTCAGCTCCTTGTGTGCCATCACGTGGGGCATGGTTCCCTGTTGAAGAGGAGAATGGTTCCCAGCAACTTAATCGGGATGTACCTAAAGGAT TCCCTGTAGATTCTGAGCCACTGTGTATTGAGAAGCATCAGCCTCGTCATCCATCCTTTTTTTCCAAACTTGACACCTCTATTTCATCTGATAAAATTAT CCATGAGAGCCACCAAAGACTGCCGAAGGAGGTAATGGCCATGTTTCAGTCTACCTGTAATGTTGATGGACTTTTGGCTTCTGTAGTGAATTAATTCTAC TAAGATAATTTTTCACAGATGTATCATAGAGATGATTGCTCAAGGTTAAGCCATAATAAACTCTCTACTTATCATTCATTCTCTGGTAAGCATGTTTAGG TACTATGCATGTTTAGTTGTTTCTCTGCTGCTTTTTCCCAAGTCTTCTCTTCTCATGTCCTGATTGATGGTGTTTGGCTGCCATTGTTTGGTTTTGAAAT GTAATTCAGTTCGAGTACACTTTTGTTTTGGTTTCTATGTTTAATTAAGATGACTGATTTTTCTTTTTTATTTCCTTTTTGCTTTAGCATTTAGTAATTA TTTAGCTTTGGACTATTGTTTTCTTCTTAAAATATACTTTTTGACTCTCACAATTATATCCTCCTCTATTTAATAAATATATCTTTCTAGATCATTCCCT TTGTCTTCCTTCACTAAACATAAGCATTAAAAAACTTTTTTTCTTGTTGTCTACCTTTTGTTTTTGTTTTCATTAACTGGTTCCCCCTTCTCCCAGTTCT ATTTGTTTTTATGGTTGTTATGAAGGTGATGACATCCCCTTGAGTAGGTCATCTTCCAGCCACAGAGATCTTGACTCAGAGTCTGGTCATTGTCTATTGC ATGCAGATAATACAGTTAGAATAGTACAGGAAATTGCACTGAAGTGTGGAACTAGGGTGGAATTTAAATCATCATTGGTTGCTAGCACAGAATTACTGTT TTCAGTGGAGGCATGGTTCTCCGGGAAAAAAATTGGTCAAGGACTTGGCAGAACTAGAAAAGAAGCCCAACATAAGGCTTCTGGAGATTCCATCAACCAC TTGGCTGATATATATTTGTCTCGTGCCAAGGCTGATTCTGGTTCCACATATGGCAATGTGAATGGGTTTCCTAAAGCAAATGACAACAATGGTCATGTCA GCAATGTTAATTCTCCTGGTAATCAATCATGGCTTAAAGAAGATTCAGTATCATCTTCAACTTCATCGGATCCGTCAAGGGTTTTAGATCATAGGTTTGA AGTCTCTAAGAGGTCAATGGGTTCAGTCTCTGCACTGAAAGAATTGTGCATGATGGAGGGTCTTCGTATCAGTTTTCAGTCACTGCCTGCTCCAGTCTCA ACGAATTCAGCTCGGAAAGATGAAGTATATGCACAGGTCGAAATAGATGGCCAGGTCTTTGGCAAAGGGATTGGATTAACATGGGATGAGGCTAAAATTC AGGCTTCCGAGAAGGCACTTGGAAGTCTAAGGATGAAGCTTAGTCAAAACAATCAGAAACGGCATGGTTCCCCCAGATCATCACCTGGATTGTCAACTAA ACGTTTGAGGCAAGAATATCCCTGGAATCCTCAGCGGATTCCTTCTTCTGGTAGAGATCCCGGGAATTCTCCTCCAGTTCCTTGAAAAGAGTAACAAGCT TATCATCTAACTTATGGTGTGGTTATTGTTGGGGCTACTACAACTTAAAGTGATTTATTGGCCCATCTTTGTTATTTGCTGAGACAAGCCATGTTGACCA CCAACTTGTTGCAACCTCATGAAGTGGAGTGAGATTCTGCTAACAGATTTTGTAAATACTCACATCTTGGTCCTCCAGGCAATGCAGTATTGGTTATGTG TGTATCCTGGAAATGGCAAGGCCGATTCACATGACACAATGACAAGGCAAGTCCAATGCCTACTTGAATTTCTGTGACCTGTACACTCGGTGCAGCATAC TCAAGTAGGCTATTGGAATTAACTAACTAAGCATTGATTCAACATTTTTTCTAGCTGAACTGCTGATGCAATCATTAGTACAGACCTTGATGCATGGAGA GTTGGTTTTCACCAACCTATAGGTTGATGTTAGTTTTTTTTGTTCCATTAATTCTATCACACTCACACTTGACAGAGTCTGAGGTTGGTGAATTTGCAGT GTAATATCACTCATCAATGTATAACAGTTTTTCCCTTGTGATTACCCAGCAACTATAACAGTTTTCCCCTTGTGGTTACCAGCAATTATTTTGTTATAGT AGGTGTTTAGGTGAGTGTATAAAATAGTTATGTTAATGCATTGGTAAGGTTGTTGCTTAGTGATTATAAAGTCACCTGTTTAAGTCCTG BLAST
Tissueflowers
Gene nameLI_gene_80538; 
Additional informationdetails; 

Expression of Ll_transcript_50474

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_50474
BlastpRNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 63.35% of identity
BlastxRNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 63.35% of identity
EggnogCTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
KeggLink to kegg annotations (AT4G21670)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019433418.1)
PfamNLI interacting factor-like phosphatase (PF03031.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;