Id Trinity | FTRINITY_DN58850_c0_g1_i11 |
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Name Transcript | Ll_transcript_51868 |
Sequence | CTTCAAAGTGGAAGGGACTACATACAATCCAGCTGATGGTAGAATAGAGAACTGGCCGGCAGGTAAATTGGATGCAAATCTTCAGACAATAGCGAAAATT GCTGCTATCTGTAATGATGCTGGAGTCACACAGTCAGAGCATAAGTTTATCGCCCATGGAATGCCAACCGAAGCAGCATTGAAGGTTTTGGTTGAGAAGA TGGGCCTTCCTGAAGGATCTAAGGATGAATCATCAGCAAATTCAAGCAGTGTGCTCCGTTGTTCTGAATGGTGGCATAAACATGACCCGCGGATTGCCAC TCTTGAGTTTGATCGTGACAGGAAGTCAATGGGTGTTATTGTTGACTCTAGTCTGGGGAAAAAGTCACTGCTGGTCAAGGGTGCTGTAGAAAACCTGTTA GAAAGAAGCTCTAAAATTCAGTTGTCTGATGGTTCTATTGTGAAACTGGACAATAATGCTAAGAACCTCGTCTTGCAAGCTCTCAATGAAATGTCAACTA GTGCATTGCGCTGTTTGGGATTTGCATACAAGGATGAGCTCCCTGACTTTGAAAACTACAGTGGTAATGATGACCATCCTGCTCACCAGCTTTTGCTTAA TCCTTCCAACTATTCATCAATTGAAAGTGATCTCATTTTTGTTGGTTTGGTTGGGTTGAGGGATCCTCCTAGGAAGGAGGTATACCAAGCAATTGAGGAC TGCAGAGCAGCTGGAATTCGTGTTATGGTTATTACCGGAGACAACAAGAACACAGCAGAAGCTGTCTGCTGTGAAATAGGTTTATTTGGACCCAGTGAAG ACATTAGTTCTAGAAGCATAACAGGGAAAGAGTTTGTGGGGCTGCATGATAAAAAAGGCTACTTGAGACAGAGTGGTGGGCTTTTGTTTTCAAGGGCAGA ACCTACTCATAAGCAAGATATTGTGAGGCTGCTCAAAGAGGAAGGGGAGGTGGTGGCTATGACTGGAGATGGTGTTAATGATGCACCTGCCTTAAAGCTT GCTGATATTGGCATCGCAATGGGAATTGCAGGGACTGAGGTGGCAAAGGAATCTTCCGATATGGTGTTAGCTGATGATAATTTTAGTACAATTGTTGCTG CTGTTGGTGAAGGTAGATCTATTTACAATAATATGAAGGCTTTTATCAGGTACATGATCTCTTCCAACATGGGAGAGGTTGCTTCTATATTTCTAACGGC TGCCTTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACAGATGGGCCCCCTGCAACAGCCTTGGGATTTAATCCTCCA GATACGGATATAATGAAGAAGCCTCCTCGTAACAAAGATGACTCACTAATTAACTTGTGGATTTTATTTCGCTATATGGTTGTTGGAATGTATGTTGGAT TAGCTACAGTTGGTGTCTTCATCATATGGTATACACATGGTTCCTTCTTGGGCGTTGACCTTAGCGGGGATGGCCACACCCTTGTCACTTACAATCAACT TGCCAATTGGGGTCGGTGCTCCACTTGGAACAATTTCACTGTTTCTCCCTTTACTGCTGGTGCTAGAGTTCTCTCTTTTGATAATGACCCATGTGGCTAT TTCCATGCCGGAAAAGTAAAAGCTACCACTCTCTCCCTCTCTGTATTGGTAGCCATAGAAATGTTCAACTCTCTCAATGCCCTGTCTGAGGATGGAAGCC TTTTAACAATGCCTCCTTGGGTCAACCCTTGGCTTCTTTTAGCAATGTTGGTGTCATTTAGTCTTCACTTTTTGATTTTGTATGTGCCATTCTTAGCCCA AATATTTGGTATTGTGCCCCTTAGCTTCAATGAGTGGCTTTTGGTTCTGGTTGTTGCATTCCCTGTGATTATAGTTGATGAGATGCTTAAATTTGTGGGG AGGTGTACAAGTGAATCTCAAACATCACAGGCAAGAAGATCAAAACAAAAGTCAGAGTAGACAATTTATACTTTACAGAAGCTGTTCAACCAAGTCTGGA TTATAATATTCTTGAGACTTAAGTGGTGGCCCTAGACAAAGCAGTTTTAATAATTTGTACAATTTGAGGTCTTTGTAATCTCCTTGCATAGAACAGTACT TATATGAAGACAAGGGTAATGCTACTCATACTTCTAATTTTATATCTATGTATGTTTCTTTCTGTAATCAAACAATCATTATTTCATGTTTTAATTTTAG AAACTTAACATCAGTTAGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_80625; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_51868
Blastp | Calcium-transporting ATPase 4, endoplasmic reticulum-type from Arabidopsis with 76.42% of identity |
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Blastx | Calcium-transporting ATPase 4, endoplasmic reticulum-type from Arabidopsis with 76.42% of identity |
Eggnog | P-type atpase(COG0474) |
Kegg | Link to kegg annotations (AT1G07670) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443028.1) |
Pfam | Cation transport ATPase (P-type) (PF13246.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |