Ll_transcript_50609

• Id Trinity: FTRINITY_DN58860_c1_g2_i1
• Name Transcript: Ll_transcript_50609
• Sequence: CTTTGAACGCCAAACCCCAAATCTTGGTGCTTCTGCTACTACTGCTAGGTTTAACTATATCTCTTCCTTTCTTCTTCTCATTAATCCAAATACAACAACA AAATCATAATAACCTAAATTCCCAAACTGAACGAAAGAATGAATAGAATGGATTTGGATGAAGAAATCGAAATGATGGAGGAAGAGGAAGAGGAAGAAGA TGACGATGAAATCACACAGGAAGACGCGTGGGCCGTTATCTCAGCTTATTTTGAAGAAAAGGGTTTAGTTCGTCAACAACTTGATTCCTTCGACGAGTTC ATCCAAAACACTATGCAGGAAATCGTTGATGAATCTGCTGATATTGAAATTCGACCTGAGTCTCAGCATAATCCTGGTCACCAATCTGATTTTGCCGAGA CTATCTACAAAATCAGCTTCGGTCAGATATACTTGAGTAAGCCTATGATGACCGAGTCTGATGGAGAAACTGCTACCTTGTTTCCAAAAGCGGCTAGGTT AAGGAATCTTACATATTCCGCTCCGTTGTATGTTGATGTCTCCAAGAGGGTTATCAAGAAAGGACATGATGGTGAAGAGGTTGCTGAGACTCAGGACTTC ACCAAAGTTTTCATTGGCAAGGTTCCTATCATGCTTCGCTCTAGTTATTGCACCTTATACCAGAATTCCGAGAAGGATTTGACCGAGCTTGGAGAATGTC CATTAGATCAAGGTGGTTATTTTGTTATTAATGGCAGTGAAAAGGTTCTCATTGCCCAGGAGAAGATGAGCACCAATCACGTCTATGTCTTCAAGAAGAG GCAGCCTAACAAGTATGCCTACGTGGCTGAAGTCCGCTCCATGGCTGAGTCACAGAATAGACCCCCTAGTACTATGTTTGTACGCATGCTTGCTCGAACT AGCTCCAAAGGGGGTTCTTCAGGACAATATATACGTGCAACTCTTCCATACATTCGAACGGAAATTCCTATCATTATTGTGTTTCGAGCATTAGGGTTTG TTGCTGATAAAGATATACTTGAACATATATGCTATGACTTCTCGGACACTCAAATGATGGAGTTACTTCGTCCGTCCCTGGAAGAAGCATTTGTAATTCA AAATCAACAGGTTGCACTTGACTACATAGGGAAAAGAGGATCAACCGTAGGTGTAACCAAGGAAAAGAGAATTAAGTATGCTAAGGAGATCCTTCAAAAG GAGATGCTTCCTCATGTTGGTGTTGGAGAGTATTGTGAGACAAAGAAAGCATACTATTTTGGTTATATCATACATCGGTTACTACTATGTGCACTTGGGC GGAGGGCTGAAGATGATCGGGACCATTATGGAAACAAAAGACTGGACTTAGCAGGTCCTTTACTTGGCGGTCTCTTTAGAATGCTATTCAGAAAGCTAAC TAGAGATGTCAGGGGTTATGTACAGAAGTGTGTTGATAATGGGAAAGATGTTAACCTGCAATTCGCTATCAAAGCAAAAACGATCACAAGTGGGCTTAAA TACTCACTTGCTACTGGTAATTGGGGCCAAGCAAATGCTGCGGGTACTAGAGCTGGAGTGTCACAGGTGTTGAATCGTTTAACTTATGCATCCACATTAT CTCACTTACGAAGACTAAATTCTCCCATAGGACGTGAAGGTAAGTTGGCCAAACCAAGACAGCTGCATAATTCACAGTGGGGAATGATGTGTCCAGCAGA AACACCTGAAGGACAAGCCTGTGGACTGGTGAAGAATCTGGCATTGATGGTTTACATAACAGTTGGTTCGGCAGCGTATCCTATTCTGGAGTTTTTGGAA GAATGGGGCACAGAGAATTTTGAGGAAATTTCTCCTGCAGTCATTCCCCAAGCTACCAAAATTTTTGTAAATGGTTGCTGGATGGGTATACATCGTGATC CTGATATGTTGGTGAGAACATTGAGAAAGCTGAGACGCAGGGTTGATGTTAACACTGAAGTTGGTGTTGTTAGAGATATCCGCCTTAAAGAATTGCGAAT ATATACAGATTATGGTCGCTGCAGTCGTCCTTTATTCATTGTGGATAAGCAGAGGCTTCTCATTAAGAAGAAGGATATTCATGCTTTGCAACAGAGGGAA TCCCCAGAAGATGGTGGATGGCATGATCTTGTGTCCAAGGGCTTTATAGAATATATTGACACAGAAGAAGAAGAAACTACCATGATTTCCATGACAATTA ATGATCTTGTACAAGCAAGGCTAAATCCAGAGGACGCTTATTCTGATACTTATACTCATTGTGAGATCCACCCATCACTTATTTTGGGTGTATGTGCTTC TATTATACCATTTCCTGATCATAATCAGTCACCACGTAATACGTATCAATCTGCAATGGGAAAACAAGCAATGGGGATATATGTGACCAACTATCAGTTC CGAATGGATACCTTGGCTTATGTGCTATACTATCCTCAAAAACCACTAGTCACTACAAGAGCCATGGAGCATCTCCATTTCCGGCAACTCCCAGCTGGAA TTAATGCCATTGTGGCCATCTCTTGTTATTCTGGTTACAACCAAGAAGATTCTGTTATCATGAACCAATCGTCAATAGACCGTGGATTCTTCCGGTCTCT GTTTTTCCGTTCATATAGAGATGAAGAGAAGAAAATGGGAACCCTTGTCAAAGAAGATTTTGGTCGGCCAGACAGGAGTAACACCATGGGCATGAGGCAT GGTTCTTATGAAAAGCTGGACGATGATGGTCTTGCACCACCAGGTACAAGAGTATCTGGTGAGGATGTGATCATTGGAAAGACCACCCCAATATCTCAGG AAGAGGCACAGGGACAAAATCTACGTTATACAAAACGTGATCACAGCATAAGCTTACGGCATAGTGAAACTGGAATTGTTGATCAAGTTCTGCTAACAAC AAATGCTGATGGATTGAGATTTGTGAAAGTACGTGTGAGATCTGTGCGTATACCACAAATTGGTGACAAATTCAGTAGTCGACATGGTCAGAAGGGGACA GTTGGTATGACATATACACAAGAGGACATGCCTTGGACTGCAGAAGGCATCACACCTGATATTATTGTCAACCCTCATGCTATTCCTTCTCGAATGACAA TTGGTCAGCTAATTGAGTGTATCATGGGGAAGGTTGCAGCCCACATGGGAAAAGAAGGAGATGCGACTCCTTTTACAGATGTCACTGTAAGTAGAAACCT TAATCCCATATTTCATTAGATAATTTTCAGAAATCGGAGCTGCTCATATATAAGTAAGCAACTTCCAGCTATTCCTATCTGATCAAATATTCCAAGTGCT TAGAGCAATAGAGCCTATTCTCAGTTAGTCCTTTCTTAAGTAAGCGTATATTCCCAAACAGTTACGCAGAAAGGACTGGTTTTGAGTTGATTCTAGCTAT AGATTTTCATTAGATGGGTTTTACGCCATTACAAAATCTGTCCAAGGCTTCAAACAATGTGCGATTCAAATTTTTGCAACATAATCTTGTAGTTTACCCG AGACAATTGGGAAAGTTTCCGATATGGAGGATAAATTATATCTCCCTATAGAGCATAGTGACATAATTTGACCCATGTAGCTGACCCCACCAAGTGTTAA AAAGATTTCCTTGTTGTAAGAAAATGCTTCAGCTACAATAGTCATCTACTTTACCCTTCAGAAAATGTCATAGTAGTTTTTGTTTTTTTGGGGTGTCTCA AAATATGTTTAGAGTGATTGTTTTTTAGCAAAGCTTAGAGTTCCATCATTTTTTACTGTAATCCAGGTGGACAATATCAGTAAAGCTCT
• Tissue: flowers
• Gene name: LI_gene_80712;
• Additional information: details;

Expression of Ll_transcript_50609

FPKM

• FPAB: 0.2
• FPNAB: 0.1
• LF1: 0.3
• LF2: 0.1
• LF3: 0.1
• LF4: 0.2
• UF1: 0
• UF2: 0.3
• UF3: 0
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_50609

• Blastp: DNA-directed RNA polymerase II subunit RPB2 from Lycopersicon with 94.33% of identity
• Blastx: DNA-directed RNA polymerase II subunit RPB2 from Lycopersicon with 95.7% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0085)
• Kegg: Link to kegg annotations (544278)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419458.1)
• Pfam: RNA polymerase beta subunit (PF04563.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;