| Id Trinity | FTRINITY_DN58863_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_49444 |
| Sequence | AAACAACACAAAAGAAAAAGAAAGGATCTAGGCCTATTCCATTTGTTTTTGTTTTTCACATAGTAATATTGAAATAAAATAAACCCCAGAAATGGGGTTT ATACTTTATAGTATACATTATATATGTATGATATATTCCCTCACTCACTTACTCACTCCGAATTCTGAACCCCAACGTTGTTCCTCTTTTGTTTTCTCTG TTCAGTGAATGTTAAATTGAAAAAACACTGAACTAACTTATCTGAAACCCTAACCCTAAATCACACCATGTATCTCTACAATCTCACTCTCCAGCAACCC ACCGGCATCGTCTGCGCCATCAACGGCAGCTTCTCCGGCGGCAAGTCCCAAGAAATCGTCGTCGCCAGAGGCAAAGTTCTCGATCTCCTCCGCCCTGATG ATAACGGTCGCATTCAAACCATCCTCTCCGTCGAAATCTTCGGTTCCATCAGGTCCTTAGCTCAATTCCGTCTCACCGGTGCTCAGAAAGATTACATCGT TGTCGGTTCCGATTCCGGTCGCATCGTAATTCTCGATTACAACAAGGAGAAGAACGTATTCGATAAAATTCACCAAGAAACTTTCGGTAAATCGGGTTGC CGCCGCATTGTCCCGGGTCAGTTTATAGCTATAGATCCAAAGGGTAGGGCTGTTATGATTGGTGCTTGTGAAAAGCAGAAACTTGTTTATGTTTTGAATA GGGATACTGCTGCTAGGTTAACTATTTCTTCGCCTTTAGAAGCTCACAAGTCTCATACATTAGTGTATTCAATTTGTGGGGTTGATTGTGGTTTTGAGAA TCCTATTTTTGCTGCTATTGAGTTGGATTACTCTGAGGCTGATTTGGATTCCACCGGGCAGGCTGCGTCCGAAGCTCAGAAGCATTTGACGTTTTATGAG CTTGATTTAGGGTTGAACCATGTGTCTAGGAAGTGGTCTGAACAGGTTGATAATGGTGCTAATTTGCTTGTCACTGTTCCTGGTGGCGGCGATGGGCCTA GTGGAGTGCTTGTTTGTGCTGAGAATTTTGTGATTTATAAGAATCAGGGACATCAGGAAGTTAGGGCTGTGATTCCTCGGCGTGCTGATTTGCCTAGTGA GCGTGGTGTTCTTATTGTCTCGGCAGCCATGCATAAGTTGAAGTCCATGTTTTTCTTCCTCTTGCAGACTGAGTATGGAGATATTTTTAAGGTGACCTTG GAGCATGATGGTGACCGTGTCTCAGAGTTGAAGATTAAGTATTTTGATACTATTCCTGTTACAGCTTCAATGTGTGTTCTCAAGTCAGGCTTCTTGTTTG CAGCCTCGGAGTTTGGCAATCATGCTCTGTATCAGTTTAAGGCGATTGGGGATGATGACGACGTGGAGGTGTCATCAGCTACCTTGGAGGAAACTCAGGA TGGTTTTAAGCCGGTATATTTCAGGCCGAGAAGACTGAAAAATCTTGTCAGGATTGACCAGGTCGAGAGTCTAATGCCAATAATGGATATGAAGGTCAGT AATCTTTTTGAAGAGGAAACCCCCCAGATTTTTACTCTCTGTGGGCGTGGTCCTCGTTCATCTTTGAGGATCCTGAGAACTGGTTTAGCAGTTAGTGAGA TGGCAGTATCGAGGCTTCCTGGTATACCTAGTGCTGTTTGGACTGTGAAGAAGAATGTTATTGATGAGTTTGATGCTTATATCGTTGTGTCATTCACAAA TGCTACGCTTGTGCTTTCCATTGGTGAGACAGTTGAAGAAGTTAGTGACAGTGGGTTTCTTGACACCACACCCTCCCTTGCTGTTTCCTTGATAGGTGAT GATTCTCTCATGCAGGTTCACCCTAATGGTATTAGACACATTAGGGAGGATGGGCGTATTAATGAGTGGAGAACTCCCGGAAAGAGGACAATTGCCAAAG TTGGATATAATAGACTTCAGGTTGTTATTGCACTGAGTGGAGGGGAGCTTATATATTTTGAAGTAGATGTTACTGGTCAGTTGATGGAGGTCGAAAAGCA TGAAATGTCTGGAGATGTTGCTTGTTTGGACATTGCTCCAGTACCCGAAGGCAGACAAAGATCCCGTTTTCTGGCAGTAGGTTCATTTGACAAGACTATC CGCATCTTATCACTGGACCCTGATGATTGTATGCAGGCTCTTAGTGTTCAAAGTGTTTCTTCAGCTCCAGAATCTCTTCTTTTTCTTGAAGTTCAAGCTT CCGTTGGCGGCGAGGATGGTGCAGATCATCCTGCTAGCCTTTTCTTGAATGCTGGTTTGCAGAATGGTGTCTTGTTTAGAACCGTGGTGGATATGGTTAC AGGTCAGCTTTCTGATTCTCGTTCCCGATTCTTAGGATTGAGAGCCCCAAAGTTGTTTCCTATTATTGTAAGAGGCAAGCGTGCCATGCTTTGCCTGTCA AGTCGACCATGGCTTGGTTATATTCACCAGGGACATTTCCTATTAACACCTCTTTCATATGAAACCCTTGAATACGCGGCTTCATTTTCGTCTGACCAAT GTGTGGAAGGTGTAGTTTCTGTTGCTGGTGAGGCATTGAGGATTTTTACGGTTGAAAGATTAGGAGAAACATTTAACGAGACTGTAATTCCATTAAGATA TACACCAAGAAAGTTTGTGCTGCATCCCAAACGGAAACTTTTGGTGATAGTTGAGAGTGATCAAGGAGCATTAACTGCAGAGGAGCGTGAATCTGCAAGA AAAGAGTGTTTTGAGGCTACTCAGGCAGGGGAAAATGGGACTGGAAGTGACCCAATGGAGAATGGTGGCGAGGATGAGGATAAAGATGATGCACTCTCTG ATGAACATTATGGTTATCCAAAAACTGAATCAGATAAATGGGTTTCCTGCATCAGAGTTCTTGATCCAAAGACAGGAAACACAACATGTCTTCTGGAGCT TCAGGAGAATGAGGCTGCATTCAGTGTATGCACAGTAAATTTCCATGATAAGGAATATGGAACCCTGTTAGCTGTTGGCACAGCAAAGGGACTGCAATTT TTGCCCAGAAGGACTTTAACTGCTGGATATATTCATATATATAGGTTTGTAGAGGATGGAAGATCTCTTGAACTTCTTCACAAAACTCAGGTCGAAGGTG TCCCTCTTGCTCTATGTCAGTTTCAAGGAAGATTACTTGCGGGAATAGGACCTGTGCTCAGGCTATATGATTTGGGGAAAAGACGATTGTTAAGGAAATG TGAGAATAAGCTATTCCCCAACACAATTGTCTCTATTCATGCATATCGTGATCGTATTTATGTTGGCGACATGCAAGAGTCTTTCCATTACTGCAAGTAT AGGCGGGATGAAAACCAGCTTTACATTTTTGCGGATGATTGTGTTCCAAGATGGCTTACTGCATCATACCACATAGATTTTGACACCATGGCAGGTGCAG ACAAGTTTGGGAATGTCTATTTTGTGCGGTTGCCACAGGATGTTTCAGATGAAATAGAAGAAGATCCAACTGGTGGGAGGATCAAGTGGGAGCAGGGAAA GCTGAACGGAGCTCCCAATAAGGTGGAAGAAATTGTACAATTTCATGTTGGTGATCTGATCACGTCCTTGCAAAAGGCATCTCTTATACCAGGTGGTGGA GAGTGCATTTTATATGGAACAACTATGGGAAGTATTGGGGCATTGCATGCTTTTACGTCACGAGATGATGTCGATTTCTTCTCTCATTTGGAGATGCATT TGAGGCAGGATCATCCACCTTTGTGTGGAAGAGACCACATGGCTTATAGATCTGCTTATTTTCCTGTCAAGGTATACCGAATCAATATTATGCTGTTTGC TCTTTCTTTTAAATAAATTACATAACACTGTTTCTGATTGCCATTCATACTCAATATGAACATACTATACTGCCTATTACATTTACATGGTTGTTCCCGA CAGTGGCTTTTATCTTCTGTCCTTGATAAAGCTTTCTTGGTCCTATCAATCAACCTGTTGTATTGATTCATTGAGTGTTTTTAATCCACCACATTGAGTT TTGACAAGTTTCTGAGATGCCTGTCACAATGGTGTAGGATGTGATTGATGGAGATCTGTGTGAGCAATACCCAACATTGCCAATGGATTTGCAGCGAAAA ATTGCTGATGAATTGGACAGAACCCCTGGAGAAATACTAAAGAAACTTGAGGAAGTACGAAACAAAATTATTTGAGAGATGGTCTTCAGAAAGGTCCCAG AGGTAATAGATCATTTGCACTTGTAGTAAGGTCACTAACTAAGGGTAGAAAGCTTGTTCTTCCATTTCTTGCAAAAGGGAGGAGTAGAGAGTGGATGTTT GTACTGTATTTTTGGAATGAAATCTAAGTTGGCAATCAATGTTGTGTAATTATTGATAACTGAATTATATCACGCTCATTGTGGATGTGATAATAGCAAT GCTTTTTTTTCTTCATATTACAGAGTTTTCATTTTTCACTTTTTGTTGATAGTGCTGAATATCCCAGTTCAAGTGGTACCCTTCCAAAATAGATAATAGT GCTTAAAACTTAGCCTTTTACCTTTCAATAAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80727; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_49444
| Blastp | Spliceosome-associated protein 130 B from Arabidopsis with 86.31% of identity |
|---|---|
| Blastx | Spliceosome-associated protein 130 B from Arabidopsis with 86.31% of identity |
| Eggnog | Splicing factor 3b subunit(ENOG410XPFQ) |
| Kegg | Link to kegg annotations (AT3G55200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427968.1) |
| Pfam | Mono-functional DNA-alkylating methyl methanesulfonate N-term (PF10433.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |