Ll_transcript_50061

• Id Trinity: FTRINITY_DN58875_c1_g1_i12
• Name Transcript: Ll_transcript_50061
• Sequence: AAAGAATTGAAACATAAAAAGTTTAAAACCCTAAGTGGTGAATGTAATATAAGTCCAAATACTCGTACTTATCATACCCCATCATCTTTAGCACTTGCAG TCTCTCACTGTTTCTGTTTTCTCTCTCAACATGGACCAAAACAAACACATCGTCGATACTCCACGTCCCTTTTCTTCTTCACTTTGAACACTGATCATTA TTCTGATTGCGACCCAAGATTTCTATCTACATACCCATCAATAAAAATCTAGCTTTTTTCACTTAAAGCTTTGATTTCAAGCTCAACTCAGTGCAATTAA CTGATTCGTAATATTAATAATATTTTTTTAGTTTTCATTAAGGACTGTTGATAGTTGAGATATTTTCAGTTGATTCTGTGCTCAAAGTTTCAATCTTTGT GTAGTTTTTTTGTGCTGTGTTATTTTTCACGAGTGAAGTAAAGTTTTTTTGTATCTAATGGCGAGTGGTAGTTACCGGAACATGATGTCGGATGTAGTGA CTCGATCGATGCTGGGAAACCATGAATACGGTGAGGAATTGGGGGTTTTGATTGAGAGGGAGAGGGAACTTAGCAAGTTGAGAAGTGGGTCGGCGCCACC CACTGTGGAAGGTTCATTGACAGCGGTGGGAGGGTTGTTTGATTCTTCGGTTGCGGCGGGGATGGGTTTGGGAGGAGGAAGGGGTTATTTGGGGAGTGAG GAGGATATTCGGGCTGATCCGGGATATGCGAATTATTACTATTCCAATGGTGCAAATCTGAATCCGCGGCTGCCGCCGCCACTGTTGTCGAAGGAGGACT GGCGGTTTGCGCAGCAGCGGTTTAGGGGTTCGAAGGTTGGTGGTATTGGAGATAGGAGGAGAGTGAGTGGTGATGAAGAAAGATCAATGTTCTCTGTGCA GCCTGAGAGGAAGAGTGCAGTGGAGTGGGGCGGAAATGGCGATGGCTTTATTGGATTGCCGCCAGCACCGGGACTTGGGAGTAGGCAGAGGAACTTTCCT GCTGTATTTCAGGATGAGATAAACAATGCAGCATTTGCCTCGAAACAACCTCACCGACAACCTAGCCGTAATGCATTTGATGACATACCTGAAGAATCCG AAACACATTTTTCTTATCTTGAACAAGAATTGGATGCATTGCAGTCTGGGGGCAACAAGATGGGCATGCCTGCTTCCAAAAATCTTGTTGGTATGGCTTC TCAAACCTATGCTTCTGCTTTAGGAGCATCCCTGTCAAGGAGCACCACCCCTGACTCTCAACTTCTACCGAGAGCTGCTAGTCCTTGCCTTCCGCCCATT GGGGATGGGAGGTCCAGCTCTGCAGATAAAAGAACTTCCAATGGTCAAAGTTCATTTAACACTGTATCATCTAGTTTAAATGAGGCTGCAGATCTGGTAT CTGCTTTATCTGGCATGAATCTTTCCGCATCTGACACGGTAGATGGTGTGAAACATCACCAGTCACCAAGGCACACTGAAGTGGATTATAATCATGATGT TAACAAGCACTCATACCAGAACAAGCTTGATTCTTTCTCTTTTCAGAGTCATTCTGCTAACCATTCCCATTTGGAAGTGAGTAAAAGCGGTGGTTTTGGA TTGGATCTGAATAACTCTTCAATGTATGCAAACGAACAGTTAGACCCTCGTAAAGCTGGTGGAATTTCTTTTAACTCATACTTTAAAGGACCTTCTACAA CATCTCCTACTAGCAGAGGTAATTCACCTGCTCACTATCCGAACTTTGATGATATGAGTAACTCATACCCTAACTATGGCTTCAGTGGCTACACCGTTAA TCCTTCATCACCATCCATGATGGGAAACCAGATTGGGAGTGGCAATGTGCTTCCTTTATTTGACAATGCTGCTGCTGCTGCTGCAATAAGGATGAATGCC TTGGACCATAGAGCCTTGGGAAGAGGTGCAGCTTTAGGACCTTTGATGGCTGCGTCAGAGTTACAGAATTTAAGCAGATTTGGAAATTATGCTGCTAGTA GCACTAATCAGCTGCCCTTGATGGACCCTTTGTATCCACAATATCCGAGGTCAGATGAATTTGCTGCCACACAGATTGCAGCACTAAATGAATCAGCAAT AAATAGGGGATACACAAATAATTCATTTGCAAATTTAACTAGCCTTCAAAGAGGTGATGTAGAGTCTTTAATTGCCTCTCAAAAATCACACATTGGTGGT GTTCCATACCTTGCTAAGTCAGCGAGCTTGAACCATAATTCTTATCGAAACCCATCATATGGTCTGGGCATGGCATATCCAGGAAGCCCAGTTGCTGGTT CCCGTTTCCCAAACTCTTTGTATGGACCAGGTAGTCCTATGAGCCAAACTGAACGAAATATGCATTTATCTGGGATGATGAATATGGCTGGGGGATTCAT GGGAGCTTGGCACTCAGACGCAGTCAGTAGCTTGGATGAGAACTTTGCATCCTCCTTACTGGATGAATTCAAAAACAATAAAACCAAGTGTTTTGAGCTA TCAGAAATTGCTGGCCATGTTGTTGAGTTCAGTGCTGACCAATATGGAAGCCGTTTTATTCAACAGAAACTTGAGACAGCCTCGATGGATGAGATAAACA TGGTTTTTCATGAAATAATGTCACAGGCCCTTTCTCTAATGACCGATGTCTTTGGTAATTATGTGATTCAGAAGTTTTTTGAGCATGGAACAAAAGCACA GATAAGAGAATTGGCTGACCAGCTTACAAGTCATGTGCTGACCCTAAGTCTTCAAATGTATGGCTGTCGAGTTATCCAGAAGGCTATAGAAGTTGTTGCC CTTGATCAGCAGACTAAAATGGTTGCAGAGCTGGATGGTCATATTATGCGATGTGTACGTGATCAAAATGGGAACCATGTCATCCAGAAATGTATTGAAT GTGTTCCTGAAGATGCGATCCATTTTATCGTTTCAACGTTTTTTGACCAAGTTGTGACATTATCAACTCATCCGTATGGTTGCCGTGTTATACAGAGAGT CTTGGAGTACTGCCATGATCCCAAAACGCAGCAGATTATGATGGATCAGATATTGCAGTCTGTTCGCATGTTAGCAGAAGATCAGTACGGGAATTATGTT GTACAGCATGTGCTGGAGCATGGCAAGCCACATGAACGTACGGCTATAATAAATGAATTAACTGGGCAAATAGTGCAGATGAGCCAGCAGAAGTTTGCCT CTAATGTTATAGAAAAGTGTCTATCTTTTGGAACACCTGCAGAGCGTCAAGCCCTTGTGGATGAGATGCTTGCTTCCACCAATGAAAATGAACCCCTACA GGTTTTGATGAAGGATCAGTTTGCAAACTATGTTGTACAGAAAGTACTGGAAACCTGTGATGACCAGCAACTTGAGCTAATCCTTAATCGAATAAAGATT CACTTGAATGCCTTGAAGAAGTACACCTATGGGAAGCACATTGTTGCACGTGTTGAGAAATTGGTTGCTGCTGGAGAGAGAAGGATTAGTATTCTGACTC TAAATCCTGCACAAGTGGTATAGGAAATGAAGGTTAACTGAAGAGGATAATAGAAGCTCCTACTCTTTTCTCTTTTCATATGTGGCATTACTACTAGTGG CCCTGTCTGTAATATTGAAAGTAATAAATTGTTAGTTGTACTTGAAAACTGTACATTTTGTTAGTGTGTGAGGATATAATACCTAGAATCAGTTTTAGCT GAGGCTGATGATGCTGAGTCTCAGGTGGTAAAATCAATGCCTGATTCTTATGCAGCAGAGATATATTATTATGAGCTAGTTTTTAAGGTTGTAAAGATGG GGTCTACTAATTGTACAAATTTCACTAGGTTTATCACACTCCTTGTATTCGGGATCCACACATGTTTTTATGGATGAGGTTTTACTTTTTACTCTATCTA AATCTCTGTTTTTTTTTA
• Tissue: flowers
• Gene name: LI_gene_80829;
• Additional information: details;

Expression of Ll_transcript_50061

FPKM

• FPAB: 5.3
• FPNAB: 13.3
• LF1: 6.3
• LF2: 4.6
• LF3: 6
• LF4: 6.3
• UF1: 4.9
• UF2: 4.2
• UF3: 6.4
• UF4: 6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_50061

• Blastp: Pumilio homolog 1 from Arabidopsis with 51.4% of identity
• Blastx: Pumilio homolog 1 from Arabidopsis with 50.44% of identity
• Eggnog: pumilio homolog(COG5099)
• Kegg: Link to kegg annotations (AT2G29200)
• CantataDB: Link to cantataDB annotations (CNT0000352)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433076.1)
• Pfam: Nucleic acid binding protein NABP (PF07990.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;