| Id Trinity | FTRINITY_DN58875_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_50055 |
| Sequence | CGCCGTCTCTCACTGTTCCTGTTTCTCATAACATGGACCAAAACAAACACATCATCGATGCTCCACGTCCCTTTTCTTCTTCACTTTGAACACTGATCCT CATTCTGATTGCGACCCAATATTTCAATCTCCATACCCATCAATAAAAATCCATCCTTTTTCTATCAAAGCTTGGATTTCAAGCTCAACTTGTATAAGTG GTTTCAATATTAATCATAACAAAAAACAATTTTTTTAGTTTTCATTTAGTTCTGTGCTCAAAGTTTCAATCTTTGTGTAAATTGAAATTTCTTTTGCTGT GTTATTTTCACGTGAAGTGAAGTTTTTTTGTTGTATCTAATGGTGAGTGATAGGTACCAGAACATTATGTCTGATGTGGCGATTCAATCTATACTGAAGA ACCATGAATACGGCGATGAATTGGGGTTTCTGATCGAGAGGGAGAGAGAACTGAGCAGGTTGAGAAGTGGGTCGGCGCCACCCACCGTGGAAGGTTCATT GACAGCGGTGGGAGGGTTGTTTGATTCTTCGGTTGCGGCGGGGATGGGTTTGGGAGGTGGAAGGAGTTATTTGGGGAATGAAGAGGAGCTTCGGGCTGAT CCGGGGTATGCGAATTATTACTATTCCAATGGTGCAAATCTGAACCCGCGGCTGCCGCCTCCACTGATATCGAAGGAGGACTGGCGGTTCGCGCAACAGC GGTTGAGGGGTCCAATGGTTGGTGGGATTGGAGATATGAGGAGAATGAGTGGTGAAGAAAGATCAATGTTCTCTGTGCAGCCTGAGAGGAATAGTGCAGT GGAGTGGAGCGGAAATGGCGACGGTTTAATTGGGTTGCCGCCAGCATTGGGGCTTGGGAGTAGGCAGAGTAGCTTTGCTGGTGTATTTCAGGATGAGATA AACAATGCAGCATCTGCCTCGAAGCAACCTCATCGTCCACCTAGCCGTAATGTGTTTGGTGACATACCTGAAGAGTCAGAAACTCATTTTAATTTTCTTG GGCAAGAATTGGATGCATTGCAGTCTGGTGGAAACAAGCAAGGCATATCTGCTTCCACAAATCTTGTTGGCATGGCTTCTCAAACTTATGCCTCAGCTTT AGGAGCGTCGCTGTCAAGGAGTACCACCCCTGACTCTCAACTTCTACCGAGAGCTGCTAGTCCTTGCCTTCCGCCCATTGGGGATGGGAGGTCCAGCTCT GCAGATAAAAGAACTTCCATTGGCCAAAGCTCACGTAACACTATATCATCTGGTTTAAATGAGCCTACAGATCTGGTATCTGCTTTAGCTGGGATAAATC TGTCCACAACTGACACAGTAGATGGCGAGAAACATCACCAGTCATCAAGGCACACTGAAGTGGATTATAATCATGATGTTAACAAGCACTCATATTTGAC CAATCCTGATTCTTTGTCTTTTCAGAGTCATTCTGCTAACCAATCCCATTTGGAAGTGAGTAAAAGTTGTGGTTTTGGAGTGGATCTGAATAACTCTTCA ATGTATGCAAATGAACAGTTAGATCCTCGTAAAGCTGGTGGAATTTCTGCTAAGTCATACTTTAAAGGACCTTCTACACCAATTCTTACTAGCAGAGGTA ATTCACCTGCTCACTATCAGAACTTTGATGATATGAGTAACTCATACCCTAACTATGGCTTGAGTGGGTATGCTGTTAATCCCTCATCACCATCCATGAT GGCGAGCCAGATTGGGAGTGGCAATGTGCCTCCTTTCTTTGACAATGCCGCTGCTGCATTAAGGATGAATGCCTTGGACTCTAGAGGCTTGGGAGGAGGC GCAGCTTTAGGACCTTTGTTGGCTGTATCAGAGTTACAGAATTTAAGCAGATTGGGAAATCATGCTGCTAGTAGCACTAATCAGCTGCCCTTGATGGACC CTTTGTATCCTCATTATCTGAGATCAGATGAATTTGTTGCCACACAGATTGCAGCACTCAATGAATCAGCTATAAATAGGGGATACACAAATAATTATTT TACAGATTTAGCCGGCCTCCAAAGAGGTGATTTAGAGTCTTTAATTGCCTCTAAAAAATCACACAGTGGCGGTGTTCCATACCTTGCTAAGTCAGCTAGC TTGAATCACAATTCTTATCGGAACCCATCATATGGTCTGGGCATGGCATATCCAGGAAGCCCAGTAGCTGGTTCCCTTTTCCCAAACTCCCTCTATGGAC CAGGTAGTCCTATGAGCCAAACTGAACGAAATATGCATTTATCTGGGATGAGGAATATAGCTGGTGGTTTCATGGGAGCTTGGCACTCAGACGCAGTCAG TAGCTTGGATGAGAACTTTGCATCCTCCTTACTGGATGAATTCAAAAACAATAAAACCAAGTGTTTTGAGCTATCAGAAATTGCTGGCCATGTTGTTGAG TTCAGTGCTGACCAATATGGAAGCCGTTTTATTCAACAGAAACTTGAGACAGCCTCGATGGATGAGATAAACATGGTTTTTCATGAAATAATGTCACAGG CCCTTTCTCTAATGACCGATGTCTTTGGTAATTATGTGATTCAGAAGTTTTTTGAGCATGGAACAAAAGCACAGATAAGAGAATTGGCTGACCAGCTTAC AAGTCATGTGCTGACCCTAAGTCTTCAAATGTATGGCTGTCGAGTTATCCAGAAGGCTATAGAAGTTGTTACTCTGGATCAGCAGACTAAAATGGTTGCA GAGCTGGATGGTCATATTATGCGATGTGTACGTGATCAAAATGGGAACCATGTTATTCAGAAATGTATTGAATGTGTGCCTGAAGATGTGATCCATTTTA TCGTTTCAACATTTTATGACCAAGTCGTGACATTATCAACTCATCCATATGGTTGTCGTGTTATACAGAGAGTGTTGGAGTACTGCCGTGATCCCAAAAC ACAGCAGATTATGATGGATGAGATATTGCGGTCTGTTCGCATGTTAGCACAAGATCAATATGGGAATTATGTTGTACAGCATGTGCTGGAGCATGGCAAG CCACATGAATGTACGGCTATAATAAAGGAATTAACTGGGCAAATAGTGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80829; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_50055
| Blastp | Pumilio homolog 1 from Arabidopsis with 48.25% of identity |
|---|---|
| Blastx | Pumilio homolog 1 from Arabidopsis with 47.73% of identity |
| Eggnog | pumilio homolog(COG5099) |
| Kegg | Link to kegg annotations (AT2G29200) |
| CantataDB | Link to cantataDB annotations (CNT0000352) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433053.1) |
| Pfam | Nucleic acid binding protein NABP (PF07990.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |