| Id Trinity | FTRINITY_DN58902_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_37902 |
| Sequence | ATTTGATTAGGTGAATATAAAATATGGTTTGGAAATTGGAAGGATGAGGTGAGATGGTAAATCCATTGTTCATAATTGTACTAAAAAACACCATTGTTCA AAGACACTGGATCCAGCTTTTGACACTGAAAACTCTTCTCCAAGCCTTCTACGTTCCTCACTCCCACGAATCTATAATACTCTATGCATTCATTTCATTG ATCTAATCTCAAATCACAAATCTTAAACCCACCTTAATCTCCCACAACATCAAAAATCCCAATTCTGCATCAAAGTTTCAATCTTTACCTTTTTTCCCCA CAACTCAATTTCACTCAATTCCTTCATTCATCAATGTCACACGTTCTACACCAAAGACCTCTCCAAAACCCATTTTCTAACCCCTTCTCTTTCTCACCAC CTTCTTCCACAAATCCCAAAAGACCCATTTCCCTTTTTACCCCTACAACCCTCCTTGCCCTTTTACTCTTCATCATTGTAGTGGGTTTCTTATGCCCTTG GGTAGGACTTATGCCCCAAAACATGATATTTTCCTCTGTTTCAAAACCTTATTCTGTTGTTTCTTCCAAATGGGGTCACTATACATTGGACAAAGCATTG AACTTTGTGGCCAAAAATGGGACTGTGATTGTTTGTATTGTGAGCCAGCCTTACTTGCCCTTTTTGAATAACTGGTTGATTAGTGTTACTAGACAGAAGA GACAGGATATGGTTCTTGTTATAGCTGAGGATTATGCTTCTTTGGATAAGGTTAATGAGCATTGGCCTGGCCATGCTGTACTTATTCCTCCTGTGCTTGA TGCTGAAAATGCTCATAAGTTTGGTTCTAAGGTTTGGAACTTATGTCTTTTTGTTGCATTTGGGTAGTTATATTTTATCAATGATAAGGATTTGTAAGTA AATTTAATCTGTTTTGCCCGTTATAGGAGTTTGACTTTATTACTTATATGATCTAACCGATGATATAAATTTCGGATGCAATTGTGGTTAAGTTGCGTCT ATTGCAATTGCGGGAAAATGTGACTGATGCCATTGTATTTGTGGTCATGATGCCGTTGCCGAGTGCAATTTAAAAAACTGGATCTGACCTAAAAGGCACC AGCAGTACTTCAATGTACTTGTAGTTCGGTTCTGGTATATGATACTTCTCAGATCATTGTTTTAAATTGCGGCTGCAGTCATTGGGGTCATCAAGTTGCT GATTGTAGCATGAAATTTTTGTGTGGCTAAGATCTGTTTTTGAGTTTCATGTGGTATGTTGCAGCTTGATTTAGCTGAAAGCAGATGCAATGTGGTCCGA TTGGCTGAGTCTCTGTTTTGTTGTGGTACTTTTATGTAACTTGCAATCACAATGCAATTTGTTTTTTTGGTGATGCAATTGGGGCATAAACACAACCGTA ATATTTTAGCTCTGCAATTTAGAATCTTTGTTTGGTACACTCATGCCTTTTTTAAGTGAGATACCCCAATAATTAAACAAACAATAGTATCTTATTATCT CTGTAATAACTATTGCTGACTTATTAAACATTGATGTCATTATTCTATGTTTGGATGTGTTTTTATGTTAATATTATATTAATTTTGGTTATGGTATTTT AGCCTTGGCATGTCTTTATGATGTATAGGAATTAGGACATACCGTATTTGTCTATCAGTGTTGTGTCATATCCATGTTCAATTGTATTTATATCTATGCT TCCTATTTTCTGTCTCAAAAATGTTCTTCCATGATCTAGGGATTTGAATTAATATTACTTTCTTAGATGCCTCTTGGAAATGTAAACTTGTAAAGACATA TCTGTTATTCGAGGTGGTAGTTGAAGTTTATGTCTGTGGTGGTAATAATTGTTGGATCCATTTCTTTCCTATTGGGTTCTGATTTTCATGGTTATGTCTG CTGTGGATGGCGGTATTAATTAATAGATCCGTTTGTATCCTATTGGGTGCTTATTTTCATGGTTATGTCTGCGGTGATATTAATTATCGGATCCATTCTT TGTTTCACCATATAGGGTTTCTTCAACTTTACTGCCAGGAGGCCAAGCCATCTGCTGAAGATTTTGGAGCTTGGATATAATGTAATGTACAACGACGTTG ATATGGTTTGGTTGGCTGATCCACTTGCTAAATTGGAAGGGAACCATGATGTGTACTTTTCAGATGATATGACTGCTATCAAACCATTGAACCATTCTCA TGATTTACCACCACCAGGAAAAAAGGGCCGCCCTTACATATGTAGTTGCATGATTTTCCTTCGCCATACTGGTGGAGCAAAGCTAGTGTTGAAAAAGTGG CTTGAGGAACTTCAGCTTCAGCCATGGTCTAGGGCCAAGAAATCGAATGATCAGCCTGCTTTTAACTGGGCTCTAATGAAGACTGCAAAAGAGGTGGATA TGTACCTTCTGCCACAGGCTGCATTCCCTACAGGCGGATTATATTTCAAGAACAAGACATGGGTTAAGGAAACTAAAGGATTACATGTTATAATCCATAA TAACTACATCGTAGGTTTTGAGAAGAAGATAAAGCGATTTCGTGATTATGGCCTCTGGTTGGTAGATGATCATGCAGATGAGTCTCCTCTAGGCAGACTA TGATCTAGATTAAACAAGTTTATCATCATCAACTTAGGTCCAAGCATTTAGATTCAGAACATACATTCTGCTAATCTGTTCGTCCTGCTTGCTCGTGGAC GTTGTCTGAAGACATTTGGTGATTGCCAATCACCAAATGATGGGTTGACAAACTTGATCTTCGGTTTTCCAATATGTGAAGAAAAATGTGCTTACAAATG GCTGATTTTGTTTCAAGGTCCTAAGAAGAAAAGGGTGGTTGTTAGGATCCAAAATAAGAATCCTATTTGATAGTATTAGTTCTAGAATAAAATAAATAAG ATCCTATTTGATAGTATTAGTTTTAGAATAATATAAATAAGATCATATTTGATAGTATTAGTTTTAGACCTATTTGGGTCGGGCTTATTTAGTTAGTAGG ATTACAATAATATAAATAAGATGATTCTCATTAGGTTAGCACAAGTTTTAGAAAGTTGAATAAGGATTAAGGGTTCACTCTTGTAAGAAGGTTTCCTTCT TGATTTCAGAATTCTTTCAATAAAATTGAGTATTGTTTCTTTTCCTGTCTTTCTCTATCCGATTCCATATCAGTTAGGTTATTTCCCATAACCTAACACA TGTTTATTATCTTCACATGCTAGTAATCTATACAAGAAAATTTGATCATTTCTCTGAAATACAAAGCCAATGCATAGATTCTTCACCTTCTGTAAACACT TCACTTTAATTTTAGGAAGCATTTTTCTTCTCTCCATTAAGCAGCGACTTTAAGCTTTTAGTTCTTATCATTTCATTGATACAGTAGTTATAGCTTTCTG ATGGTGTAAAGTCAAATATAGTTTATTCAACTAAACAATATTTTCATTATTTTCTGAAGAGTTCAAGAGCAAGAGGCAATGCAATGCCATCGTCCTTTAC AATTTCTGGCGATGATATTCCCGAAATTTTTAGTAACATGATGAACTCACATTTTTTACATCATGAAAGCGAAGAAGGTATATCATATGTCAGTCGATCA GTTATAGACTTGTCTGCTGGTGGTGATGATGCACCCTCTAGGCAACCATAAGATCAAATGAATGGAAGATCAGCACCAAATTAAGCTATTTTAGCATTCT GGGTTGTAAAACACTCGCAACATTAACACCAAATTTATTTGTTAAAGGATTGCAAAGCTAACTGAAAAGTTTCTCCATTTTAACATCTTAGAACTTTGAG ACACTATCCCTTGGGGTTGGGATCCTCTCAGGTACTGGACCCTCCAGTACTGGAATGTGAGGCTCATAATTTATTTCAGCATTTGCATTATCTTTTTAAA GTTTTTTTTAAAATCTATACCGTTTATTTTTTTTTAACGCCATGTGTCACCATCTAAGATAACGTTTATGAAGTATAGATTAAACGGACACATGGCGTTA AAAAAACTTCTTGCTTACTCACATGGATGACAATGAAAACTGAATCTATAGATATCCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_81042; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_37902
| Blastp | UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 62.58% of identity |
|---|---|
| Blastx | UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 from Arabidopsis with 84.62% of identity |
| Eggnog | BEST Arabidopsis thaliana protein match is RGXT1 (rhamnogalacturonan xylosyltransferase 1)(ENOG4111Z77) |
| Kegg | Link to kegg annotations (AT4G01220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462553.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |